RNA–Protein interactions for RNA: ENST00000512669.1

LETM1-207, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-207ENST00000512669 TRAK1Q9UPV9 953 aa21.21■□□□□ 0.99
LETM1-207ENST00000512669 RGPD1P0DJD0 1748 aa21.21■□□□□ 0.99
LETM1-207ENST00000512669 WASLO00401 505 aaPredicted RBP21.2■□□□□ 0.98
LETM1-207ENST00000512669 FAM98CQ17RN3 349 aaKnown RBP21.2■□□□□ 0.98
LETM1-207ENST00000512669 ITSN1Q15811 1721 aa21.2■□□□□ 0.98
LETM1-207ENST00000512669 NGDNQ8NEJ9 315 aaKnown RBP21.19■□□□□ 0.98
LETM1-207ENST00000512669 HIRIP3Q9BW71 556 aaPredicted RBP21.19■□□□□ 0.98
LETM1-207ENST00000512669 MINK1Q8N4C8 1332 aaPredicted RBP21.19■□□□□ 0.98
LETM1-207ENST00000512669 CRYBG1Q9Y4K1 1723 aa21.18■□□□□ 0.98
LETM1-207ENST00000512669 PRR36Q9H6K5 1346 aa21.18■□□□□ 0.98
LETM1-207ENST00000512669 SPATA31A5Q5VU36 1347 aa21.17■□□□□ 0.98
LETM1-207ENST00000512669 SPATA31A7Q8IWB4 1347 aa21.17■□□□□ 0.98
LETM1-207ENST00000512669 THSD7AQ9UPZ6 1657 aa21.15■□□□□ 0.98
LETM1-207ENST00000512669 ATP7BP35670 1465 aa21.15■□□□□ 0.98
LETM1-207ENST00000512669 DISP2A7MBM2 1401 aa21.15■□□□□ 0.98
LETM1-207ENST00000512669 PRDM11Q9NQV5 511 aa21.15■□□□□ 0.98
LETM1-207ENST00000512669 PAK3O75914 559 aaPredicted RBP21.14■□□□□ 0.97
LETM1-207ENST00000512669 ARHGEF28Q8N1W1 1705 aaKnown RBP21.13■□□□□ 0.97
LETM1-207ENST00000512669 PHRF1Q9P1Y6 1649 aaKnown RBP21.09■□□□□ 0.97
LETM1-207ENST00000512669 NUDT16Q96DE0 195 aaKnown RBP21.09■□□□□ 0.97
LETM1-207ENST00000512669 TNS1Q9HBL0 1735 aaKnown RBP21.09■□□□□ 0.97
LETM1-207ENST00000512669 SPATA31A1Q5TZJ5 1347 aa21.08■□□□□ 0.97
LETM1-207ENST00000512669 KIAA0232Q92628 1395 aa21.08■□□□□ 0.96
LETM1-207ENST00000512669 PSDA5PKW4 1024 aaPredicted RBP21.07■□□□□ 0.96
LETM1-207ENST00000512669 EN1Q05925 392 aaPredicted RBP21.07■□□□□ 0.96
LETM1-207ENST00000512669 FAM196AQ6ZSG2 479 aa21.07■□□□□ 0.96
LETM1-207ENST00000512669 TOPAZ1Q8N9V7 1692 aa21.06■□□□□ 0.96
LETM1-207ENST00000512669 SIN3AQ96ST3 1273 aa21.06■□□□□ 0.96
LETM1-207ENST00000512669 POLR3AO14802 1390 aaPredicted RBP21.06■□□□□ 0.96
LETM1-207ENST00000512669 PARD3Q8TEW0 1356 aa21.06■□□□□ 0.96
LETM1-207ENST00000512669 KIAA1210Q9ULL0 1709 aa21.04■□□□□ 0.96
LETM1-207ENST00000512669 NBPF1Q3BBV0 1214 aa21.03■□□□□ 0.96
LETM1-207ENST00000512669 CCDC61Q9Y6R9 512 aa21.03■□□□□ 0.96
LETM1-207ENST00000512669 FAM182BQ5T319 152 aa21.02■□□□□ 0.96
LETM1-207ENST00000512669 BARGINQ6ZT62 677 aa21.02■□□□□ 0.96
LETM1-207ENST00000512669 CDK19Q9BWU1 502 aa21.02■□□□□ 0.96
LETM1-207ENST00000512669 STRN4Q9NRL3 753 aa21.02■□□□□ 0.96
LETM1-207ENST00000512669 PLEKHG3A1L390 1219 aa21.01■□□□□ 0.95
LETM1-207ENST00000512669 CHRNA2Q15822 529 aa21.01■□□□□ 0.95
LETM1-207ENST00000512669 SSH2Q76I76 1423 aa21.01■□□□□ 0.95
LETM1-207ENST00000512669 ACEP12821 1306 aa21.01■□□□□ 0.95
LETM1-207ENST00000512669 EVA1CP58658 441 aa21■□□□□ 0.95
LETM1-207ENST00000512669 ZC3H6P61129 1189 aaKnown RBP21■□□□□ 0.95
LETM1-207ENST00000512669 R3HDM1Q15032 1099 aaKnown RBP21■□□□□ 0.95
LETM1-207ENST00000512669 NBPF8Q3BBV2 869 aa21■□□□□ 0.95
LETM1-207ENST00000512669 L3MBTL2Q969R5 705 aa21■□□□□ 0.95
LETM1-207ENST00000512669 NRKQ7Z2Y5 1582 aa21■□□□□ 0.95
LETM1-207ENST00000512669 CPDO75976 1380 aa20.99■□□□□ 0.95
LETM1-207ENST00000512669 PDE3BQ13370 1112 aa20.99■□□□□ 0.95
LETM1-207ENST00000512669 BRD4O60885 1362 aaPredicted RBP20.98■□□□□ 0.95
LETM1-207ENST00000512669 EZH2Q15910 746 aaKnown RBP20.98■□□□□ 0.95
LETM1-207ENST00000512669 CAMKK2Q96RR4 588 aa20.98■□□□□ 0.95
LETM1-207ENST00000512669 C11orf95C9JLR9 678 aaPredicted RBP20.97■□□□□ 0.95
LETM1-207ENST00000512669 TRIM37O94972 964 aa20.97■□□□□ 0.95
LETM1-207ENST00000512669 ABTB2Q8N961 1025 aa20.97■□□□□ 0.95
LETM1-207ENST00000512669 THRAP3Q9Y2W1 955 aaKnown RBP20.97■□□□□ 0.95
LETM1-207ENST00000512669 USP19O94966 1318 aa20.97■□□□□ 0.95
LETM1-207ENST00000512669 LMO7Q8WWI1 1683 aa20.96■□□□□ 0.95
LETM1-207ENST00000512669 APBA3O96018 575 aa20.96■□□□□ 0.95
LETM1-207ENST00000512669 NUTM2GQ5VZR2 741 aa20.96■□□□□ 0.95
LETM1-207ENST00000512669 TCP11L2Q8N4U5 519 aa20.96■□□□□ 0.95
LETM1-207ENST00000512669 NEUROD1Q13562 356 aa20.95■□□□□ 0.94
LETM1-207ENST00000512669 USP35Q9P2H5 1018 aa20.95■□□□□ 0.94
LETM1-207ENST00000512669 RREB1Q92766 1687 aa20.95■□□□□ 0.94
LETM1-207ENST00000512669 CAMTA1Q9Y6Y1 1673 aa20.94■□□□□ 0.94
LETM1-207ENST00000512669 NLRP13Q86W25 1043 aa20.94■□□□□ 0.94
LETM1-207ENST00000512669 TRIM26Q12899 539 aaPredicted RBP20.92■□□□□ 0.94
LETM1-207ENST00000512669 NBPF14Q5TI25 921 aa20.92■□□□□ 0.94
LETM1-207ENST00000512669 PARP4Q9UKK3 1724 aaKnown RBP20.92■□□□□ 0.94
LETM1-207ENST00000512669 SRPK2P78362 688 aaKnown RBP20.91■□□□□ 0.94
LETM1-207ENST00000512669 PPIP5K1Q6PFW1 1433 aa20.91■□□□□ 0.94
LETM1-207ENST00000512669 LARP1Q6PKG0 1096 aaKnown RBP20.91■□□□□ 0.94
LETM1-207ENST00000512669 GCP02774 474 aa20.9■□□□□ 0.94
LETM1-207ENST00000512669 NUP188Q5SRE5 1749 aa20.9■□□□□ 0.94
LETM1-207ENST00000512669 COL5A2P05997 1499 aaPredicted RBP20.89■□□□□ 0.94
LETM1-207ENST00000512669 CENPJQ9HC77 1338 aaPredicted RBP20.89■□□□□ 0.93
LETM1-207ENST00000512669 CRB1P82279 1406 aa20.87■□□□□ 0.93
LETM1-207ENST00000512669 RGPD3A6NKT7 1758 aaPredicted RBP20.86■□□□□ 0.93
LETM1-207ENST00000512669 RGPD4Q7Z3J3 1758 aa20.86■□□□□ 0.93
LETM1-207ENST00000512669 OVOS2A0A0G2JMS6 1433 aa20.86■□□□□ 0.93
LETM1-207ENST00000512669 OVOS2A0A0J9YW53 1432 aa20.86■□□□□ 0.93
LETM1-207ENST00000512669 OVOS2Q6IE36 1432 aa20.86■□□□□ 0.93
LETM1-207ENST00000512669 QRICH2Q9H0J4 1663 aa20.85■□□□□ 0.93
LETM1-207ENST00000512669 USP6P35125 1406 aa20.85■□□□□ 0.93
LETM1-207ENST00000512669 AATKQ6ZMQ8 1374 aa20.85■□□□□ 0.93
LETM1-207ENST00000512669 SLIT3O75094 1523 aa20.84■□□□□ 0.93
LETM1-207ENST00000512669 CABP2Q9NPB3 220 aa20.83■□□□□ 0.93
LETM1-207ENST00000512669 NLRP6P59044 892 aa20.81■□□□□ 0.92
LETM1-207ENST00000512669 PEAK1Q9H792 1746 aa20.81■□□□□ 0.92
LETM1-207ENST00000512669 LRRC37A3O60309 1634 aa20.8■□□□□ 0.92
LETM1-207ENST00000512669 TRPM1Q7Z4N2 1603 aa20.8■□□□□ 0.92
LETM1-207ENST00000512669 CDCA7Q9BWT1 371 aaPredicted RBP20.8■□□□□ 0.92
LETM1-207ENST00000512669 SPON1Q9HCB6 807 aa20.8■□□□□ 0.92
LETM1-207ENST00000512669 EVC2Q86UK5 1308 aa20.78■□□□□ 0.92
LETM1-207ENST00000512669 PLSCR1O15162 318 aa20.78■□□□□ 0.92
LETM1-207ENST00000512669 DDB1Q16531 1140 aa20.78■□□□□ 0.92
LETM1-207ENST00000512669 CABP1Q9NZU7 370 aa20.78■□□□□ 0.92
LETM1-207ENST00000512669 PIK3C2AO00443 1686 aa20.77■□□□□ 0.92
LETM1-207ENST00000512669 NINLQ9Y2I6 1382 aa20.77■□□□□ 0.92
LETM1-207ENST00000512669 SBF2Q86WG5 1849 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms