RNA–Protein interactions for RNA: ENST00000512643.1

PDS5A-209, Transcript of PDS5 cohesin associated factor A, humanhuman

TSL 4

Gene PDS5A, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-209ENST00000512643 STK32AQ8WU08 396 aa7.52□□□□□ -1.21
PDS5A-209ENST00000512643 USB1Q9BQ65 265 aaKnown RBP7.52□□□□□ -1.21
PDS5A-209ENST00000512643 PRR14Q9BWN1 585 aa7.52□□□□□ -1.21
PDS5A-209ENST00000512643 ZMIZ1Q9ULJ6 1067 aa7.52□□□□□ -1.21
PDS5A-209ENST00000512643 F12P00748 615 aaPredicted RBP7.51□□□□□ -1.21
PDS5A-209ENST00000512643 ELOAQ14241 798 aaKnown RBP7.51□□□□□ -1.21
PDS5A-209ENST00000512643 TMEM164Q5U3C3 297 aa7.51□□□□□ -1.21
PDS5A-209ENST00000512643 MRPL50Q8N5N7 158 aaKnown RBP7.51□□□□□ -1.21
PDS5A-209ENST00000512643 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.51□□□□□ -1.21
PDS5A-209ENST00000512643 MAP10Q9P2G4 905 aa7.51□□□□□ -1.21
PDS5A-209ENST00000512643 BHMG1C9JSJ3 638 aaPredicted RBP7.5□□□□□ -1.21
PDS5A-209ENST00000512643 SKIP12755 728 aa7.5□□□□□ -1.21
PDS5A-209ENST00000512643 NOVA2Q9UNW9 492 aaKnown RBP7.5□□□□□ -1.21
PDS5A-209ENST00000512643 ZC3H4Q9UPT8 1303 aaKnown RBP7.5□□□□□ -1.21
PDS5A-209ENST00000512643 PLEKHM2Q8IWE5 1019 aa7.49□□□□□ -1.21
PDS5A-209ENST00000512643 DEPDC4Q8N2C3 294 aa7.49□□□□□ -1.21
PDS5A-209ENST00000512643 GNEQ9Y223 722 aaKnown RBP7.49□□□□□ -1.21
PDS5A-209ENST00000512643 JUNDP17535 347 aa7.48□□□□□ -1.21
PDS5A-209ENST00000512643 CTHP32929 405 aa7.48□□□□□ -1.21
PDS5A-209ENST00000512643 EMP3P54852 163 aa7.48□□□□□ -1.21
PDS5A-209ENST00000512643 PTPRNQ16849 979 aa7.48□□□□□ -1.21
PDS5A-209ENST00000512643 BRICD5Q6PL45 260 aa7.48□□□□□ -1.21
PDS5A-209ENST00000512643 FAM174AQ8TBP5 190 aa7.48□□□□□ -1.21
PDS5A-209ENST00000512643 SALL2Q9Y467 1007 aaPredicted RBP7.48□□□□□ -1.21
PDS5A-209ENST00000512643 FAM196BA6NMK8 535 aa7.47□□□□□ -1.21
PDS5A-209ENST00000512643 USP17L15C9J2P7 530 aa7.47□□□□□ -1.21
PDS5A-209ENST00000512643 USP17L10C9JJH3 530 aa7.47□□□□□ -1.21
PDS5A-209ENST00000512643 USP17L13C9JLJ4 530 aa7.47□□□□□ -1.21
PDS5A-209ENST00000512643 USP17L12C9JPN9 530 aa7.47□□□□□ -1.21
PDS5A-209ENST00000512643 USP17L11C9JVI0 530 aa7.47□□□□□ -1.21
PDS5A-209ENST00000512643 USP17L21D6R901 530 aa7.47□□□□□ -1.21
PDS5A-209ENST00000512643 USP17L18D6R9N7 530 aa7.47□□□□□ -1.21
PDS5A-209ENST00000512643 USP17L22D6RA61 530 aa7.47□□□□□ -1.21
PDS5A-209ENST00000512643 USP17L17D6RBQ6 530 aa7.47□□□□□ -1.21
PDS5A-209ENST00000512643 USP17L19D6RCP7 530 aa7.47□□□□□ -1.21
PDS5A-209ENST00000512643 USP17L20D6RJB6 530 aa7.47□□□□□ -1.21
PDS5A-209ENST00000512643 FMNL1O95466 1100 aaPredicted RBP7.47□□□□□ -1.21
PDS5A-209ENST00000512643 USP17L24Q0WX57 530 aa7.47□□□□□ -1.21
PDS5A-209ENST00000512643 E9PSI1 815 aa7.46□□□□□ -1.22
PDS5A-209ENST00000512643 TK2O00142 265 aa7.46□□□□□ -1.22
PDS5A-209ENST00000512643 CRTC2Q53ET0 693 aaPredicted RBP7.46□□□□□ -1.22
PDS5A-209ENST00000512643 ZNF687Q8N1G0 1237 aa7.46□□□□□ -1.22
PDS5A-209ENST00000512643 CCER1Q8TC90 406 aaPredicted RBP7.46□□□□□ -1.22
PDS5A-209ENST00000512643 AMOTL2Q9Y2J4 779 aa7.46□□□□□ -1.22
PDS5A-209ENST00000512643 NR1I2O75469 434 aa7.45□□□□□ -1.22
PDS5A-209ENST00000512643 APLP1P51693 650 aa7.45□□□□□ -1.22
PDS5A-209ENST00000512643 PPP4CP60510 307 aa7.45□□□□□ -1.22
PDS5A-209ENST00000512643 NCOA4Q13772 614 aa7.45□□□□□ -1.22
PDS5A-209ENST00000512643 SLFNL1Q499Z3 407 aa7.45□□□□□ -1.22
PDS5A-209ENST00000512643 LHX8Q68G74 356 aa7.45□□□□□ -1.22
PDS5A-209ENST00000512643 SCUBE3Q8IX30 993 aa7.45□□□□□ -1.22
PDS5A-209ENST00000512643 ANKK1Q8NFD2 765 aa7.45□□□□□ -1.22
PDS5A-209ENST00000512643 THAP11Q96EK4 314 aa7.45□□□□□ -1.22
PDS5A-209ENST00000512643 MKRN1Q9UHC7 482 aaKnown RBP7.45□□□□□ -1.22
PDS5A-209ENST00000512643 MYT1LQ9UL68 1186 aa7.45□□□□□ -1.22
PDS5A-209ENST00000512643 PCDHB3Q9Y5E6 796 aa7.45□□□□□ -1.22
PDS5A-209ENST00000512643 CCNYL3P0C7X3 344 aa7.44□□□□□ -1.22
PDS5A-209ENST00000512643 RASA1P20936 1047 aa7.44□□□□□ -1.22
PDS5A-209ENST00000512643 PTK2Q05397 1052 aa7.44□□□□□ -1.22
PDS5A-209ENST00000512643 LARP1Q6PKG0 1096 aaKnown RBP7.44□□□□□ -1.22
PDS5A-209ENST00000512643 RNF135Q8IUD6 432 aa7.44□□□□□ -1.22
PDS5A-209ENST00000512643 ZNF592Q92610 1267 aa7.44□□□□□ -1.22
PDS5A-209ENST00000512643 MARVELD3Q96A59 401 aa7.44□□□□□ -1.22
PDS5A-209ENST00000512643 HPS5Q9UPZ3 1129 aa7.44□□□□□ -1.22
PDS5A-209ENST00000512643 GPSM3Q9Y4H4 160 aa7.44□□□□□ -1.22
PDS5A-209ENST00000512643 PCDHB9Q9Y5E1 797 aa7.44□□□□□ -1.22
PDS5A-209ENST00000512643 FAM205CA6NFA0 338 aa7.43□□□□□ -1.22
PDS5A-209ENST00000512643 PTK7Q13308 1070 aa7.43□□□□□ -1.22
PDS5A-209ENST00000512643 NBPF14Q5TI25 921 aa7.43□□□□□ -1.22
PDS5A-209ENST00000512643 PHLDB3Q6NSJ2 640 aa7.43□□□□□ -1.22
PDS5A-209ENST00000512643 ADGRD1Q6QNK2 874 aa7.43□□□□□ -1.22
PDS5A-209ENST00000512643 TXNDC2Q86VQ3 553 aa7.43□□□□□ -1.22
PDS5A-209ENST00000512643 OTUD5Q96G74 571 aa7.43□□□□□ -1.22
PDS5A-209ENST00000512643 CEP126Q9P2H0 1117 aa7.43□□□□□ -1.22
PDS5A-209ENST00000512643 GOLGA8CPA6NN73 597 aa7.42□□□□□ -1.22
PDS5A-209ENST00000512643 ATP5J2-PTCD1G3V325 749 aa7.42□□□□□ -1.22
PDS5A-209ENST00000512643 BCAMP50895 628 aa7.42□□□□□ -1.22
PDS5A-209ENST00000512643 PDXDC2PQ6P474 469 aa7.42□□□□□ -1.22
PDS5A-209ENST00000512643 FAM9AQ8IZU1 332 aaPredicted RBP7.42□□□□□ -1.22
PDS5A-209ENST00000512643 PLPP7Q8NBV4 271 aa7.42□□□□□ -1.22
PDS5A-209ENST00000512643 ARMC2Q8NEN0 867 aa7.42□□□□□ -1.22
PDS5A-209ENST00000512643 GPKOWQ92917 476 aaPredicted RBP eCLIP7.42□□□□□ -1.221e-6■■■■■ 26.9
PDS5A-209ENST00000512643 NUDT12Q9BQG2 462 aa7.42□□□□□ -1.22
PDS5A-209ENST00000512643 SOWAHBA6NEL2 793 aa7.41□□□□□ -1.22
PDS5A-209ENST00000512643 ST18O60284 1047 aa7.41□□□□□ -1.22
PDS5A-209ENST00000512643 SSFA2P28290 1259 aa7.41□□□□□ -1.22
PDS5A-209ENST00000512643 MSS51Q4VC12 460 aa7.41□□□□□ -1.22
PDS5A-209ENST00000512643 FAM200AQ8TCP9 573 aa7.41□□□□□ -1.22
PDS5A-209ENST00000512643 OCSTAMPQ9BR26 566 aa7.41□□□□□ -1.22
PDS5A-209ENST00000512643 SLAIN2Q9P270 581 aa7.41□□□□□ -1.22
PDS5A-209ENST00000512643 TSR3Q9UJK0 312 aaKnown RBP7.41□□□□□ -1.22
PDS5A-209ENST00000512643 DXOO77932 396 aaKnown RBP7.4□□□□□ -1.22
PDS5A-209ENST00000512643 ARID4AP29374 1257 aaPredicted RBP7.4□□□□□ -1.22
PDS5A-209ENST00000512643 MCCD1P59942 119 aaPredicted RBP7.4□□□□□ -1.22
PDS5A-209ENST00000512643 LSM11P83369 360 aaKnown RBP eCLIP7.4□□□□□ -1.22
PDS5A-209ENST00000512643 KCNH2Q12809 1159 aa7.4□□□□□ -1.22
PDS5A-209ENST00000512643 EML3Q32P44 896 aa7.4□□□□□ -1.22
PDS5A-209ENST00000512643 ADAM32Q8TC27 787 aa7.4□□□□□ -1.22
PDS5A-209ENST00000512643 CLP1Q92989 425 aaKnown RBP7.4□□□□□ -1.22
PDS5A-209ENST00000512643 PRDM9Q9NQV7 894 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms