RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 MRC1P22897 1456 aa2.79□□□□□ -1.96
TRAPPC13-211ENST00000512009 CERKQ8TCT0 537 aa2.78□□□□□ -1.96
TRAPPC13-211ENST00000512009 PHF23Q9BUL5 403 aaPredicted RBP2.78□□□□□ -1.96
TRAPPC13-211ENST00000512009 SOS2Q07890 1332 aaPredicted RBP2.78□□□□□ -1.96
TRAPPC13-211ENST00000512009 COL4A1P02462 1669 aa2.78□□□□□ -1.96
TRAPPC13-211ENST00000512009 KDRP35968 1356 aa2.78□□□□□ -1.96
TRAPPC13-211ENST00000512009 RGS12O14924 1447 aa2.78□□□□□ -1.96
TRAPPC13-211ENST00000512009 PER1O15534 1290 aaPredicted RBP2.78□□□□□ -1.96
TRAPPC13-211ENST00000512009 FREM2Q5SZK8 3169 aa2.78□□□□□ -1.96
TRAPPC13-211ENST00000512009 KIF20BQ96Q89 1820 aa2.78□□□□□ -1.96
TRAPPC13-211ENST00000512009 CPDO75976 1380 aa2.78□□□□□ -1.96
TRAPPC13-211ENST00000512009 BOD1L1Q8NFC6 3051 aa2.77□□□□□ -1.97
TRAPPC13-211ENST00000512009 FRMPD3Q5JV73 1810 aa2.77□□□□□ -1.97
TRAPPC13-211ENST00000512009 ABCC11Q96J66 1382 aa2.77□□□□□ -1.97
TRAPPC13-211ENST00000512009 IBTKQ9P2D0 1353 aaPredicted RBP2.77□□□□□ -1.97
TRAPPC13-211ENST00000512009 TRANK1O15050 2925 aa2.77□□□□□ -1.97
TRAPPC13-211ENST00000512009 VPS13AQ96RL7 3174 aa2.77□□□□□ -1.97
TRAPPC13-211ENST00000512009 LAMB2P55268 1798 aa2.76□□□□□ -1.97
TRAPPC13-211ENST00000512009 ZBTB22O15209 634 aa2.76□□□□□ -1.97
TRAPPC13-211ENST00000512009 POLR3AO14802 1390 aaPredicted RBP2.76□□□□□ -1.97
TRAPPC13-211ENST00000512009 CHD7Q9P2D1 2997 aa2.76□□□□□ -1.97
TRAPPC13-211ENST00000512009 TNRC6CQ9HCJ0 1690 aaKnown RBP2.76□□□□□ -1.97
TRAPPC13-211ENST00000512009 LAMA4Q16363 1823 aa2.76□□□□□ -1.97
TRAPPC13-211ENST00000512009 CHD9Q3L8U1 2897 aa2.76□□□□□ -1.97
TRAPPC13-211ENST00000512009 TCHHQ07283 1943 aa2.76□□□□□ -1.97
TRAPPC13-211ENST00000512009 DMRT2Q9Y5R5 561 aa2.75□□□□□ -1.97
TRAPPC13-211ENST00000512009 PCGF6Q9BYE7 350 aa2.75□□□□□ -1.97
TRAPPC13-211ENST00000512009 FER1L6Q2WGJ9 1857 aa2.75□□□□□ -1.97
TRAPPC13-211ENST00000512009 TJP1Q07157 1748 aa2.75□□□□□ -1.97
TRAPPC13-211ENST00000512009 TSHZ2Q9NRE2 1034 aa2.75□□□□□ -1.97
TRAPPC13-211ENST00000512009 SBNO1A3KN83 1393 aa2.75□□□□□ -1.97
TRAPPC13-211ENST00000512009 RGPD2P0DJD1 1756 aa2.75□□□□□ -1.97
TRAPPC13-211ENST00000512009 WASHC2AQ641Q2 1341 aa2.75□□□□□ -1.97
TRAPPC13-211ENST00000512009 SCN11AQ9UI33 1791 aa2.75□□□□□ -1.97
TRAPPC13-211ENST00000512009 CCNB3Q8WWL7 1395 aa2.74□□□□□ -1.97
TRAPPC13-211ENST00000512009 FNBP4Q8N3X1 1017 aaPredicted RBP2.74□□□□□ -1.97
TRAPPC13-211ENST00000512009 TBX22Q9Y458 520 aa2.74□□□□□ -1.97
TRAPPC13-211ENST00000512009 ACIN1Q9UKV3 1341 aaKnown RBP2.74□□□□□ -1.97
TRAPPC13-211ENST00000512009 TNRC18O15417 2968 aaPredicted RBP2.74□□□□□ -1.97
TRAPPC13-211ENST00000512009 FAM69CQ0P6D2 419 aa2.74□□□□□ -1.97
TRAPPC13-211ENST00000512009 SCN7AQ01118 1682 aa2.74□□□□□ -1.97
TRAPPC13-211ENST00000512009 SPATA31A6Q5VVP1 1343 aa2.74□□□□□ -1.97
TRAPPC13-211ENST00000512009 BSNQ9UPA5 3926 aa2.73□□□□□ -1.97
TRAPPC13-211ENST00000512009 CSRNP3Q8WYN3 585 aa2.73□□□□□ -1.97
TRAPPC13-211ENST00000512009 WDR90Q96KV7 1748 aa2.73□□□□□ -1.97
TRAPPC13-211ENST00000512009 TRMT2AQ8IZ69 625 aaKnown RBP2.73□□□□□ -1.97
TRAPPC13-211ENST00000512009 MIER1Q8N108 512 aa2.73□□□□□ -1.97
TRAPPC13-211ENST00000512009 PNPLA6Q8IY17 1366 aa2.73□□□□□ -1.97
TRAPPC13-211ENST00000512009 SGIP1Q9BQI5 828 aa2.73□□□□□ -1.97
TRAPPC13-211ENST00000512009 CACNA1FO60840 1977 aa2.73□□□□□ -1.97
TRAPPC13-211ENST00000512009 DDIT3P35638 169 aa2.73□□□□□ -1.97
TRAPPC13-211ENST00000512009 NBPF8Q3BBV2 869 aa2.73□□□□□ -1.97
TRAPPC13-211ENST00000512009 USP31Q70CQ4 1352 aa2.73□□□□□ -1.97
TRAPPC13-211ENST00000512009 TNRQ92752 1358 aa2.73□□□□□ -1.97
TRAPPC13-211ENST00000512009 NSD3Q9BZ95 1437 aa2.73□□□□□ -1.97
TRAPPC13-211ENST00000512009 ANKRD50Q9ULJ7 1429 aa2.72□□□□□ -1.97
TRAPPC13-211ENST00000512009 BTAF1O14981 1849 aa2.72□□□□□ -1.97
TRAPPC13-211ENST00000512009 ANKRD36CQ5JPF3 1778 aa2.72□□□□□ -1.97
TRAPPC13-211ENST00000512009 TESK2Q96S53 571 aa2.72□□□□□ -1.97
TRAPPC13-211ENST00000512009 RIC1Q4ADV7 1423 aa2.72□□□□□ -1.97
TRAPPC13-211ENST00000512009 SUPT5HO00267 1087 aaKnown RBP2.72□□□□□ -1.97
TRAPPC13-211ENST00000512009 PUS7Q96PZ0 661 aaKnown RBP2.72□□□□□ -1.97
TRAPPC13-211ENST00000512009 WDR87Q6ZQQ6 2873 aa2.72□□□□□ -1.97
TRAPPC13-211ENST00000512009 ILDR2Q71H61 639 aa2.71□□□□□ -1.98
TRAPPC13-211ENST00000512009 MYO5AQ9Y4I1 1855 aaKnown RBP2.71□□□□□ -1.98
TRAPPC13-211ENST00000512009 RAPGEF3O95398 923 aa2.71□□□□□ -1.98
TRAPPC13-211ENST00000512009 LTN1O94822 1766 aa2.71□□□□□ -1.98
TRAPPC13-211ENST00000512009 TIAM2Q8IVF5 1701 aa2.71□□□□□ -1.98
TRAPPC13-211ENST00000512009 FRYQ5TBA9 3013 aa2.71□□□□□ -1.98
TRAPPC13-211ENST00000512009 ANKRD31Q8N7Z5 1873 aa2.71□□□□□ -1.98
TRAPPC13-211ENST00000512009 COL2A1P02458 1487 aaPredicted RBP2.7□□□□□ -1.98
TRAPPC13-211ENST00000512009 CSMD1Q96PZ7 3565 aa2.7□□□□□ -1.98
TRAPPC13-211ENST00000512009 COL1A1P02452 1464 aaPredicted RBP2.7□□□□□ -1.98
TRAPPC13-211ENST00000512009 JCADQ9P266 1359 aa2.69□□□□□ -1.98
TRAPPC13-211ENST00000512009 STAC3Q96MF2 364 aa2.69□□□□□ -1.98
TRAPPC13-211ENST00000512009 ARAP2Q8WZ64 1704 aa2.69□□□□□ -1.98
TRAPPC13-211ENST00000512009 TAF1P21675 1872 aa2.69□□□□□ -1.98
TRAPPC13-211ENST00000512009 NPC1L1Q9UHC9 1359 aa2.69□□□□□ -1.98
TRAPPC13-211ENST00000512009 AK9Q5TCS8 1911 aa2.69□□□□□ -1.98
TRAPPC13-211ENST00000512009 SUPT16HQ9Y5B9 1047 aaKnown RBP2.69□□□□□ -1.98
TRAPPC13-211ENST00000512009 NINLQ9Y2I6 1382 aa2.69□□□□□ -1.98
TRAPPC13-211ENST00000512009 IFFO2Q5TF58 517 aa2.68□□□□□ -1.98
TRAPPC13-211ENST00000512009 CDK5RAP2Q96SN8 1893 aa2.68□□□□□ -1.98
TRAPPC13-211ENST00000512009 RIMS2Q9UQ26 1411 aa2.68□□□□□ -1.98
TRAPPC13-211ENST00000512009 KDM2BQ8NHM5 1336 aa2.68□□□□□ -1.98
TRAPPC13-211ENST00000512009 LAMA5O15230 3695 aa2.68□□□□□ -1.98
TRAPPC13-211ENST00000512009 EFCAB2Q5VUJ9 269 aa2.68□□□□□ -1.98
TRAPPC13-211ENST00000512009 COL4A6Q14031 1691 aa2.68□□□□□ -1.98
TRAPPC13-211ENST00000512009 LOC285556D6RIA3 1793 aa2.68□□□□□ -1.98
TRAPPC13-211ENST00000512009 POTEHQ6S545 545 aa2.68□□□□□ -1.98
TRAPPC13-211ENST00000512009 FAM9AQ8IZU1 332 aaPredicted RBP2.67□□□□□ -1.98
TRAPPC13-211ENST00000512009 KCNA6P17658 529 aa2.67□□□□□ -1.98
TRAPPC13-211ENST00000512009 ZNF692Q9BU19 519 aaPredicted RBP2.67□□□□□ -1.98
TRAPPC13-211ENST00000512009 SCN4AP35499 1836 aa2.67□□□□□ -1.98
TRAPPC13-211ENST00000512009 ZNF236Q9UL36 1845 aa2.67□□□□□ -1.98
TRAPPC13-211ENST00000512009 KIF24Q5T7B8 1368 aa2.67□□□□□ -1.98
TRAPPC13-211ENST00000512009 AKAP11Q9UKA4 1901 aa2.67□□□□□ -1.98
TRAPPC13-211ENST00000512009 DOCK2Q92608 1830 aa2.66□□□□□ -1.98
TRAPPC13-211ENST00000512009 WASHC2CQ9Y4E1 1318 aa2.66□□□□□ -1.98
TRAPPC13-211ENST00000512009 SPEF2Q9C093 1822 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms