RNA–Protein interactions for RNA: ENST00000511649.5

RAB28-207, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 5

Gene RAB28, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-207ENST00000511649 ESF1Q9H501 851 aaKnown RBP10.28□□□□□ -0.76
RAB28-207ENST00000511649 TNRQ92752 1358 aa10.27□□□□□ -0.76
RAB28-207ENST00000511649 MAP3K7O43318 606 aa10.27□□□□□ -0.77
RAB28-207ENST00000511649 KCNK17Q96T54 332 aa10.27□□□□□ -0.77
RAB28-207ENST00000511649 IQSEC2Q5JU85 1478 aa10.27□□□□□ -0.77
RAB28-207ENST00000511649 ZC3H13Q5T200 1668 aaKnown RBP10.27□□□□□ -0.77
RAB28-207ENST00000511649 PTPN23Q9H3S7 1636 aa10.26□□□□□ -0.77
RAB28-207ENST00000511649 ABCC5O15440 1437 aa10.26□□□□□ -0.77
RAB28-207ENST00000511649 ERVK-7P63135 1459 aa10.26□□□□□ -0.77
RAB28-207ENST00000511649 PSEN2P49810 448 aa10.26□□□□□ -0.77
RAB28-207ENST00000511649 CFAP65Q6ZU64 1925 aaKnown RBP10.26□□□□□ -0.77
RAB28-207ENST00000511649 PRDM15P57071 1507 aaPredicted RBP10.26□□□□□ -0.77
RAB28-207ENST00000511649 DEPDC5O75140 1603 aa10.25□□□□□ -0.77
RAB28-207ENST00000511649 TSR1Q2NL82 804 aaKnown RBP10.25□□□□□ -0.77
RAB28-207ENST00000511649 C6orf132Q5T0Z8 1188 aa10.25□□□□□ -0.77
RAB28-207ENST00000511649 SMYD5Q6GMV2 418 aa10.25□□□□□ -0.77
RAB28-207ENST00000511649 ILDR2Q71H61 639 aa10.25□□□□□ -0.77
RAB28-207ENST00000511649 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.25□□□□□ -0.77
RAB28-207ENST00000511649 MIA2Q96PC5 1412 aa10.24□□□□□ -0.77
RAB28-207ENST00000511649 UBR1Q8IWV7 1749 aa10.24□□□□□ -0.77
RAB28-207ENST00000511649 SHANK2Q9UPX8 1470 aa10.24□□□□□ -0.77
RAB28-207ENST00000511649 RNF166Q96A37 237 aaPredicted RBP10.24□□□□□ -0.77
RAB28-207ENST00000511649 UGGT1Q9NYU2 1555 aa10.23□□□□□ -0.77
RAB28-207ENST00000511649 PPP1R3GB7ZBB8 358 aa10.23□□□□□ -0.77
RAB28-207ENST00000511649 LSM11P83369 360 aaKnown RBP eCLIP10.23□□□□□ -0.77
RAB28-207ENST00000511649 DMRTA1Q5VZB9 504 aa10.23□□□□□ -0.77
RAB28-207ENST00000511649 NLRP1Q9C000 1473 aa10.23□□□□□ -0.77
RAB28-207ENST00000511649 DUOX2Q9NRD8 1548 aa10.23□□□□□ -0.77
RAB28-207ENST00000511649 IQGAP1P46940 1657 aa10.22□□□□□ -0.77
RAB28-207ENST00000511649 ANKRD13DQ6ZTN6 518 aa10.22□□□□□ -0.77
RAB28-207ENST00000511649 CDHR5Q9HBB8 845 aa10.22□□□□□ -0.77
RAB28-207ENST00000511649 DAPK1P53355 1430 aa10.22□□□□□ -0.77
RAB28-207ENST00000511649 FGD6Q6ZV73 1430 aa10.22□□□□□ -0.77
RAB28-207ENST00000511649 MED14O60244 1454 aa10.22□□□□□ -0.77
RAB28-207ENST00000511649 COL9A1P20849 921 aa10.21□□□□□ -0.77
RAB28-207ENST00000511649 WASHC2CQ9Y4E1 1318 aa10.21□□□□□ -0.78
RAB28-207ENST00000511649 XIRP1Q702N8 1843 aaKnown RBP10.21□□□□□ -0.78
RAB28-207ENST00000511649 PIK3C2BO00750 1634 aa10.2□□□□□ -0.78
RAB28-207ENST00000511649 SYNMO15061 1565 aa10.2□□□□□ -0.78
RAB28-207ENST00000511649 KIF15Q9NS87 1388 aa10.2□□□□□ -0.78
RAB28-207ENST00000511649 ARHGAP23Q9P227 1491 aa10.19□□□□□ -0.78
RAB28-207ENST00000511649 NPHP4O75161 1426 aaPredicted RBP10.19□□□□□ -0.78
RAB28-207ENST00000511649 TULP1O00294 542 aaPredicted RBP10.19□□□□□ -0.78
RAB28-207ENST00000511649 RBM26Q5T8P6 1007 aaKnown RBP10.19□□□□□ -0.78
RAB28-207ENST00000511649 RSPH4AQ5TD94 716 aa10.19□□□□□ -0.78
RAB28-207ENST00000511649 ERBINQ96RT1 1412 aa10.18□□□□□ -0.78
RAB28-207ENST00000511649 BCANQ96GW7 911 aa10.18□□□□□ -0.78
RAB28-207ENST00000511649 ZBED2Q9BTP6 218 aa10.18□□□□□ -0.78
RAB28-207ENST00000511649 CPS1P31327 1500 aa10.17□□□□□ -0.78
RAB28-207ENST00000511649 DISP3Q9P2K9 1392 aa10.17□□□□□ -0.78
RAB28-207ENST00000511649 SLC4A5Q9BY07 1137 aa10.17□□□□□ -0.78
RAB28-207ENST00000511649 SLIT1O75093 1534 aa10.17□□□□□ -0.78
RAB28-207ENST00000511649 LMTK2Q8IWU2 1503 aa10.17□□□□□ -0.78
RAB28-207ENST00000511649 ARHGAP31Q2M1Z3 1444 aa10.16□□□□□ -0.78
RAB28-207ENST00000511649 TK2O00142 265 aa10.16□□□□□ -0.78
RAB28-207ENST00000511649 TSPY4P0CV99 314 aa10.16□□□□□ -0.78
RAB28-207ENST00000511649 TSPY10P0CW01 314 aa10.16□□□□□ -0.78
RAB28-207ENST00000511649 EFCAB6Q5THR3 1501 aa10.16□□□□□ -0.78
RAB28-207ENST00000511649 LRRC7Q96NW7 1537 aa10.16□□□□□ -0.78
RAB28-207ENST00000511649 ADGRL2O95490 1459 aa10.16□□□□□ -0.78
RAB28-207ENST00000511649 NUTM2FA1L443 756 aa10.15□□□□□ -0.78
RAB28-207ENST00000511649 UBAP1LF5GYI3 381 aa10.15□□□□□ -0.78
RAB28-207ENST00000511649 LTKP29376 864 aa10.15□□□□□ -0.78
RAB28-207ENST00000511649 ADGRD1Q6QNK2 874 aa10.15□□□□□ -0.78
RAB28-207ENST00000511649 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.15□□□□□ -0.78
RAB28-207ENST00000511649 NPDC1Q9NQX5 325 aaPredicted RBP10.15□□□□□ -0.78
RAB28-207ENST00000511649 RRP7BPQ9NSQ0 103 aa10.15□□□□□ -0.78
RAB28-207ENST00000511649 MYO5BQ9ULV0 1848 aa10.14□□□□□ -0.79
RAB28-207ENST00000511649 PROX2Q3B8N5 592 aa10.14□□□□□ -0.79
RAB28-207ENST00000511649 VPS9D1Q9Y2B5 631 aa10.14□□□□□ -0.79
RAB28-207ENST00000511649 MED1Q15648 1581 aaPredicted RBP10.14□□□□□ -0.79
RAB28-207ENST00000511649 SCAF11Q99590 1463 aaKnown RBP10.13□□□□□ -0.79
RAB28-207ENST00000511649 PTGDRQ13258 359 aa10.13□□□□□ -0.79
RAB28-207ENST00000511649 NOS1P29475 1434 aa10.13□□□□□ -0.79
RAB28-207ENST00000511649 GPR37O15354 613 aa10.12□□□□□ -0.79
RAB28-207ENST00000511649 HSPA1LP34931 641 aa10.12□□□□□ -0.79
RAB28-207ENST00000511649 LMOD2Q6P5Q4 547 aa10.12□□□□□ -0.79
RAB28-207ENST00000511649 GPIHBP1Q8IV16 184 aa10.12□□□□□ -0.79
RAB28-207ENST00000511649 CHIC2Q9UKJ5 165 aa10.12□□□□□ -0.79
RAB28-207ENST00000511649 KDM5AP29375 1690 aaKnown RBP10.12□□□□□ -0.79
RAB28-207ENST00000511649 TRIM6-TRIM34B2RNG4 842 aa10.11□□□□□ -0.79
RAB28-207ENST00000511649 HRO43593 1189 aa10.11□□□□□ -0.79
RAB28-207ENST00000511649 ANKLE2Q86XL3 938 aa10.11□□□□□ -0.79
RAB28-207ENST00000511649 RBM27Q9P2N5 1060 aaKnown RBP10.11□□□□□ -0.79
RAB28-207ENST00000511649 TET3O43151 1660 aa10.11□□□□□ -0.79
RAB28-207ENST00000511649 UNC13BO14795 1591 aa10.1□□□□□ -0.79
RAB28-207ENST00000511649 ONECUT3O60422 494 aaPredicted RBP10.1□□□□□ -0.79
RAB28-207ENST00000511649 FCHSD2O94868 740 aa10.1□□□□□ -0.79
RAB28-207ENST00000511649 PRSS12P56730 875 aa10.1□□□□□ -0.79
RAB28-207ENST00000511649 THEMISQ8N1K5 641 aaPredicted RBP10.1□□□□□ -0.79
RAB28-207ENST00000511649 CDCA7LQ96GN5 454 aa10.1□□□□□ -0.79
RAB28-207ENST00000511649 TSKSQ9UJT2 592 aa10.1□□□□□ -0.79
RAB28-207ENST00000511649 ADGRB3O60242 1522 aa10.1□□□□□ -0.79
RAB28-207ENST00000511649 GCC2Q8IWJ2 1684 aa10.09□□□□□ -0.79
RAB28-207ENST00000511649 TMEM2Q9UHN6 1383 aa10.09□□□□□ -0.79
RAB28-207ENST00000511649 E9PCH4 1651 aa10.09□□□□□ -0.79
RAB28-207ENST00000511649 PIP4K2BP78356 416 aa10.08□□□□□ -0.8
RAB28-207ENST00000511649 PADI6Q6TGC4 694 aa10.08□□□□□ -0.8
RAB28-207ENST00000511649 FAM198AQ9UFP1 575 aa10.08□□□□□ -0.8
RAB28-207ENST00000511649 RABGEF1Q9UJ41 708 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms