RNA–Protein interactions for RNA: ENST00000511633.5

NEK1-207, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-207ENST00000511633 SKOR2Q2VWA4 1001 aaPredicted RBP10.99□□□□□ -0.65
NEK1-207ENST00000511633 ZNF530Q6P9A1 599 aaPredicted RBP10.99□□□□□ -0.65
NEK1-207ENST00000511633 CABP4P57796 275 aa10.99□□□□□ -0.65
NEK1-207ENST00000511633 FSD1Q9BTV5 496 aa10.99□□□□□ -0.65
NEK1-207ENST00000511633 SMC3Q9UQE7 1217 aa10.99□□□□□ -0.65
NEK1-207ENST00000511633 CCDC141Q6ZP82 1450 aa10.99□□□□□ -0.65
NEK1-207ENST00000511633 DNAJC2Q99543 621 aaKnown RBP10.99□□□□□ -0.65
NEK1-207ENST00000511633 CAMSAP2Q08AD1 1489 aa10.99□□□□□ -0.65
NEK1-207ENST00000511633 HDGFL1Q5TGJ6 251 aa10.99□□□□□ -0.65
NEK1-207ENST00000511633 ANKRD30BQ9BXX2 1392 aa10.99□□□□□ -0.65
NEK1-207ENST00000511633 AAMPQ13685 434 aa10.98□□□□□ -0.65
NEK1-207ENST00000511633 CD109Q6YHK3 1445 aa10.98□□□□□ -0.65
NEK1-207ENST00000511633 BICRAQ9NZM4 1560 aa10.98□□□□□ -0.65
NEK1-207ENST00000511633 TPM3P06753 285 aa10.98□□□□□ -0.65
NEK1-207ENST00000511633 RALYLQ86SE5 291 aaKnown RBP10.98□□□□□ -0.65
NEK1-207ENST00000511633 CLASRPQ8N2M8 674 aaKnown RBP10.98□□□□□ -0.65
NEK1-207ENST00000511633 BICD2Q8TD16 824 aa10.98□□□□□ -0.65
NEK1-207ENST00000511633 CNTROBQ8N137 903 aa10.98□□□□□ -0.65
NEK1-207ENST00000511633 NINLQ9Y2I6 1382 aa10.98□□□□□ -0.65
NEK1-207ENST00000511633 NAIPQ13075 1403 aa10.97□□□□□ -0.65
NEK1-207ENST00000511633 MTMR7Q9Y216 660 aa10.97□□□□□ -0.65
NEK1-207ENST00000511633 CUL7Q14999 1698 aa10.97□□□□□ -0.65
NEK1-207ENST00000511633 KDM4AO75164 1064 aa10.97□□□□□ -0.65
NEK1-207ENST00000511633 WAPLQ7Z5K2 1190 aa10.97□□□□□ -0.65
NEK1-207ENST00000511633 MYL6BP14649 208 aa10.96□□□□□ -0.65
NEK1-207ENST00000511633 PIP4K2BP78356 416 aa10.96□□□□□ -0.65
NEK1-207ENST00000511633 CHMP5Q9NZZ3 219 aa10.96□□□□□ -0.65
NEK1-207ENST00000511633 WDR97A6NE52 1622 aa10.96□□□□□ -0.65
NEK1-207ENST00000511633 ATAD2Q6PL18 1390 aa10.96□□□□□ -0.65
NEK1-207ENST00000511633 SPG7Q9UQ90 795 aa10.96□□□□□ -0.65
NEK1-207ENST00000511633 GRIN2AQ12879 1464 aa10.96□□□□□ -0.65
NEK1-207ENST00000511633 GNAI2P04899 355 aa10.96□□□□□ -0.66
NEK1-207ENST00000511633 NUDT16Q96DE0 195 aaKnown RBP10.96□□□□□ -0.66
NEK1-207ENST00000511633 CEP89Q96ST8 783 aa10.96□□□□□ -0.66
NEK1-207ENST00000511633 PRDM11Q9NQV5 511 aa10.96□□□□□ -0.66
NEK1-207ENST00000511633 PDZRN3Q9UPQ7 1066 aa10.96□□□□□ -0.66
NEK1-207ENST00000511633 KIF14Q15058 1648 aa10.96□□□□□ -0.66
NEK1-207ENST00000511633 NSD3Q9BZ95 1437 aa10.96□□□□□ -0.66
NEK1-207ENST00000511633 TSR1Q2NL82 804 aaKnown RBP10.95□□□□□ -0.66
NEK1-207ENST00000511633 TPM2P07951 284 aa10.95□□□□□ -0.66
NEK1-207ENST00000511633 ADGRL1O94910 1474 aa10.95□□□□□ -0.66
NEK1-207ENST00000511633 PNISRQ8TF01 805 aaKnown RBP10.95□□□□□ -0.66
NEK1-207ENST00000511633 PTPN23Q9H3S7 1636 aa10.95□□□□□ -0.66
NEK1-207ENST00000511633 ZC3H6P61129 1189 aaKnown RBP10.95□□□□□ -0.66
NEK1-207ENST00000511633 GSE1Q14687 1217 aa10.95□□□□□ -0.66
NEK1-207ENST00000511633 AKNAQ7Z591 1439 aa10.95□□□□□ -0.66
NEK1-207ENST00000511633 SIL1Q9H173 461 aa10.95□□□□□ -0.66
NEK1-207ENST00000511633 CCDC184Q52MB2 194 aa10.94□□□□□ -0.66
NEK1-207ENST00000511633 CNNM1Q9NRU3 951 aa10.94□□□□□ -0.66
NEK1-207ENST00000511633 TBC1D2BQ9UPU7 963 aa10.94□□□□□ -0.66
NEK1-207ENST00000511633 PCMTD1Q96MG8 357 aaPredicted RBP10.94□□□□□ -0.66
NEK1-207ENST00000511633 ABCC5O15440 1437 aa10.94□□□□□ -0.66
NEK1-207ENST00000511633 SAFBQ15424 915 aaKnown RBP eCLIP10.93□□□□□ -0.66
NEK1-207ENST00000511633 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.93□□□□□ -0.66
NEK1-207ENST00000511633 A0A0U1RQG5 324 aaPredicted RBP10.93□□□□□ -0.66
NEK1-207ENST00000511633 TPM1P09493 284 aa10.93□□□□□ -0.66
NEK1-207ENST00000511633 WDR63Q8IWG1 891 aa10.93□□□□□ -0.66
NEK1-207ENST00000511633 BTBD11A6QL63 1104 aa10.92□□□□□ -0.66
NEK1-207ENST00000511633 PDE3AQ14432 1141 aa10.92□□□□□ -0.66
NEK1-207ENST00000511633 TTC39AQ5SRH9 613 aa10.92□□□□□ -0.66
NEK1-207ENST00000511633 CCT4P50991 539 aaKnown RBP10.92□□□□□ -0.66
NEK1-207ENST00000511633 NUCB2P80303 420 aa10.92□□□□□ -0.66
NEK1-207ENST00000511633 CCDC47Q96A33 483 aaKnown RBP10.92□□□□□ -0.66
NEK1-207ENST00000511633 SRCIN1Q9C0H9 1055 aa10.92□□□□□ -0.66
NEK1-207ENST00000511633 FANCIQ9NVI1 1328 aa10.92□□□□□ -0.66
NEK1-207ENST00000511633 PSMA5P28066 241 aa10.92□□□□□ -0.66
NEK1-207ENST00000511633 FBXO31Q5XUX0 539 aaPredicted RBP10.92□□□□□ -0.66
NEK1-207ENST00000511633 WWC1Q8IX03 1113 aa10.92□□□□□ -0.66
NEK1-207ENST00000511633 CCDC61Q9Y6R9 512 aa10.92□□□□□ -0.66
NEK1-207ENST00000511633 ERC1Q8IUD2 1116 aa10.92□□□□□ -0.66
NEK1-207ENST00000511633 GCC1Q96CN9 775 aa10.92□□□□□ -0.66
NEK1-207ENST00000511633 MAP4K4O95819 1239 aaPredicted RBP10.91□□□□□ -0.66
NEK1-207ENST00000511633 PRM3Q9NNZ6 103 aa10.91□□□□□ -0.66
NEK1-207ENST00000511633 URB2Q14146 1524 aaKnown RBP10.91□□□□□ -0.66
NEK1-207ENST00000511633 CWC22Q9HCG8 908 aaKnown RBP10.91□□□□□ -0.66
NEK1-207ENST00000511633 HOOK1Q9UJC3 728 aaKnown RBP10.91□□□□□ -0.66
NEK1-207ENST00000511633 CCAR2Q8N163 923 aaKnown RBP10.91□□□□□ -0.66
NEK1-207ENST00000511633 MIS18AQ9NYP9 233 aa10.91□□□□□ -0.66
NEK1-207ENST00000511633 PPP1R1BQ9UD71 204 aaPredicted RBP10.91□□□□□ -0.66
NEK1-207ENST00000511633 ZNF608Q9ULD9 1512 aaPredicted RBP10.9□□□□□ -0.66
NEK1-207ENST00000511633 CEBPAP49715 358 aaPredicted RBP10.9□□□□□ -0.66
NEK1-207ENST00000511633 CCDC158Q5M9N0 1113 aa10.9□□□□□ -0.66
NEK1-207ENST00000511633 ATF7IPQ6VMQ6 1270 aa10.9□□□□□ -0.66
NEK1-207ENST00000511633 FCHSD2O94868 740 aa10.9□□□□□ -0.66
NEK1-207ENST00000511633 RRP12Q5JTH9 1297 aaKnown RBP10.9□□□□□ -0.66
NEK1-207ENST00000511633 CCDC73Q6ZRK6 1079 aa10.9□□□□□ -0.67
NEK1-207ENST00000511633 CCDC43Q96MW1 224 aaKnown RBP10.9□□□□□ -0.67
NEK1-207ENST00000511633 LRRCC1Q9C099 1032 aa10.9□□□□□ -0.67
NEK1-207ENST00000511633 NEK4P51957 841 aa10.89□□□□□ -0.67
NEK1-207ENST00000511633 IKQ13123 557 aaPredicted RBP10.89□□□□□ -0.67
NEK1-207ENST00000511633 SASS6Q6UVJ0 657 aa10.89□□□□□ -0.67
NEK1-207ENST00000511633 THUMPD2Q9BTF0 503 aaKnown RBP10.89□□□□□ -0.67
NEK1-207ENST00000511633 GOLGA6L1Q8N7Z2 621 aa10.89□□□□□ -0.67
NEK1-207ENST00000511633 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.89□□□□□ -0.67
NEK1-207ENST00000511633 ADGRF5Q8IZF2 1346 aa10.89□□□□□ -0.67
NEK1-207ENST00000511633 MVPQ14764 893 aaKnown RBP10.89□□□□□ -0.67
NEK1-207ENST00000511633 NFE2L2Q16236 605 aa10.89□□□□□ -0.67
NEK1-207ENST00000511633 STK11IPQ8N1F8 1099 aa10.89□□□□□ -0.67
NEK1-207ENST00000511633 ANKRD20A12PQ8NF67 263 aa10.89□□□□□ -0.67
NEK1-207ENST00000511633 ZNF592Q92610 1267 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms