RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 AP1G2O75843 785 aa6.79□□□□□ -1.32
TRAPPC11-207ENST00000511409 TMEM259Q4ZIN3 620 aa6.79□□□□□ -1.32
TRAPPC11-207ENST00000511409 RTL5Q5HYW3 569 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC11-207ENST00000511409 PPP2R2DQ66LE6 453 aa6.79□□□□□ -1.32
TRAPPC11-207ENST00000511409 SYMPKQ92797 1274 aaKnown RBP6.79□□□□□ -1.32
TRAPPC11-207ENST00000511409 ZMYND15Q9H091 742 aa6.79□□□□□ -1.32
TRAPPC11-207ENST00000511409 WFS1O76024 890 aa6.78□□□□□ -1.32
TRAPPC11-207ENST00000511409 UBTFP17480 764 aaKnown RBP6.78□□□□□ -1.32
TRAPPC11-207ENST00000511409 NFX1Q12986 1120 aaKnown RBP6.78□□□□□ -1.32
TRAPPC11-207ENST00000511409 SUPT5HO00267 1087 aaKnown RBP6.77□□□□□ -1.33
TRAPPC11-207ENST00000511409 AXIN1O15169 862 aa6.77□□□□□ -1.33
TRAPPC11-207ENST00000511409 MCM6Q14566 821 aa6.77□□□□□ -1.33
TRAPPC11-207ENST00000511409 BANK1Q8NDB2 785 aa6.77□□□□□ -1.33
TRAPPC11-207ENST00000511409 GMPR2Q9P2T1 348 aaKnown RBP6.77□□□□□ -1.33
TRAPPC11-207ENST00000511409 FOXC1Q12948 553 aa6.76□□□□□ -1.33
TRAPPC11-207ENST00000511409 PTPRNQ16849 979 aa6.76□□□□□ -1.33
TRAPPC11-207ENST00000511409 CYP4X1Q8N118 509 aa6.76□□□□□ -1.33
TRAPPC11-207ENST00000511409 PRR7Q8TB68 274 aa6.76□□□□□ -1.33
TRAPPC11-207ENST00000511409 DACH1Q9UI36 760 aa6.76□□□□□ -1.33
TRAPPC11-207ENST00000511409 RAD21O60216 631 aa6.75□□□□□ -1.33
TRAPPC11-207ENST00000511409 CD2BP2O95400 341 aaKnown RBP6.75□□□□□ -1.33
TRAPPC11-207ENST00000511409 INSM1Q01101 510 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC11-207ENST00000511409 HELBQ8NG08 1087 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC11-207ENST00000511409 CLUAP1Q96AJ1 413 aa6.75□□□□□ -1.33
TRAPPC11-207ENST00000511409 SNRKQ9NRH2 765 aa6.75□□□□□ -1.33
TRAPPC11-207ENST00000511409 NUDT12Q9BQG2 462 aa6.74□□□□□ -1.33
TRAPPC11-207ENST00000511409 C11orf95C9JLR9 678 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC11-207ENST00000511409 ZBTB24O43167 697 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC11-207ENST00000511409 USP17L8P0C7I0 530 aa6.73□□□□□ -1.33
TRAPPC11-207ENST00000511409 CCNYL3P0C7X3 344 aa6.73□□□□□ -1.33
TRAPPC11-207ENST00000511409 LYPD8Q6UX82 237 aa6.73□□□□□ -1.33
TRAPPC11-207ENST00000511409 EVA1BQ9NVM1 165 aa6.73□□□□□ -1.33
TRAPPC11-207ENST00000511409 CFAP99D6REC4 459 aa6.72□□□□□ -1.33
TRAPPC11-207ENST00000511409 WNT7AO00755 349 aa6.72□□□□□ -1.33
TRAPPC11-207ENST00000511409 CTDSPL2Q05D32 466 aa6.72□□□□□ -1.33
TRAPPC11-207ENST00000511409 APBB1O00213 710 aa6.71□□□□□ -1.34
TRAPPC11-207ENST00000511409 WNT7BP56706 349 aa6.71□□□□□ -1.34
TRAPPC11-207ENST00000511409 TRIM32Q13049 653 aa6.71□□□□□ -1.34
TRAPPC11-207ENST00000511409 POM121Q96HA1 1249 aa6.71□□□□□ -1.34
TRAPPC11-207ENST00000511409 PRM3Q9NNZ6 103 aa6.71□□□□□ -1.34
TRAPPC11-207ENST00000511409 KCNH2Q12809 1159 aa6.7□□□□□ -1.34
TRAPPC11-207ENST00000511409 MTMR14Q8NCE2 650 aa6.7□□□□□ -1.34
TRAPPC11-207ENST00000511409 A6NJR5 290 aa6.69□□□□□ -1.34
TRAPPC11-207ENST00000511409 F12P00748 615 aaPredicted RBP6.69□□□□□ -1.34
TRAPPC11-207ENST00000511409 SMPD1P17405 629 aa6.69□□□□□ -1.34
TRAPPC11-207ENST00000511409 LCE2CQ5TA81 110 aa6.69□□□□□ -1.34
TRAPPC11-207ENST00000511409 PTCRAQ6ISU1 281 aaPredicted RBP6.69□□□□□ -1.34
TRAPPC11-207ENST00000511409 CCDC24Q8N4L8 307 aa6.69□□□□□ -1.34
TRAPPC11-207ENST00000511409 SNIP1Q8TAD8 396 aaKnown RBP6.69□□□□□ -1.34
TRAPPC11-207ENST00000511409 TRIM47Q96LD4 638 aa6.69□□□□□ -1.34
TRAPPC11-207ENST00000511409 SENP2Q9HC62 589 aa6.69□□□□□ -1.34
TRAPPC11-207ENST00000511409 GDPD2Q9HCC8 539 aa6.69□□□□□ -1.34
TRAPPC11-207ENST00000511409 ATP13A2Q9NQ11 1180 aa6.69□□□□□ -1.34
TRAPPC11-207ENST00000511409 TTC24A2A3L6 582 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC11-207ENST00000511409 ABL2P42684 1182 aa6.68□□□□□ -1.34
TRAPPC11-207ENST00000511409 LRRN4Q8WUT4 740 aa6.68□□□□□ -1.34
TRAPPC11-207ENST00000511409 COG6Q9Y2V7 657 aa6.68□□□□□ -1.34
TRAPPC11-207ENST00000511409 ARID3CA6NKF2 412 aa6.67□□□□□ -1.34
TRAPPC11-207ENST00000511409 TERTO14746 1132 aaKnown RBP6.67□□□□□ -1.34
TRAPPC11-207ENST00000511409 PROSER2Q86WR7 435 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC11-207ENST00000511409 WWC1Q8IX03 1113 aa6.67□□□□□ -1.34
TRAPPC11-207ENST00000511409 KIFC2Q96AC6 838 aa6.67□□□□□ -1.34
TRAPPC11-207ENST00000511409 UNC93B1Q9H1C4 597 aa6.67□□□□□ -1.34
TRAPPC11-207ENST00000511409 HMX1Q9NP08 348 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC11-207ENST00000511409 PER1O15534 1290 aaPredicted RBP6.66□□□□□ -1.34
TRAPPC11-207ENST00000511409 TRAK2O60296 914 aa6.66□□□□□ -1.34
TRAPPC11-207ENST00000511409 SKOR1P84550 965 aa6.66□□□□□ -1.34
TRAPPC11-207ENST00000511409 TBC1D2BQ9UPU7 963 aa6.66□□□□□ -1.34
TRAPPC11-207ENST00000511409 NDUFB9Q9Y6M9 179 aa6.65□□□□□ -1.34
TRAPPC11-207ENST00000511409 SOCS7O14512 581 aa6.64□□□□□ -1.35
TRAPPC11-207ENST00000511409 SNRPBP14678 240 aaKnown RBP6.64□□□□□ -1.35
TRAPPC11-207ENST00000511409 GJD4Q96KN9 370 aaPredicted RBP6.64□□□□□ -1.35
TRAPPC11-207ENST00000511409 ARID3AQ99856 593 aa6.64□□□□□ -1.35
TRAPPC11-207ENST00000511409 ZNF777Q9ULD5 760 aaPredicted RBP6.64□□□□□ -1.35
TRAPPC11-207ENST00000511409 ZNF330Q9Y3S2 320 aaPredicted RBP6.64□□□□□ -1.35
TRAPPC11-207ENST00000511409 CTHP32929 405 aa6.63□□□□□ -1.35
TRAPPC11-207ENST00000511409 SH3BP2P78314 561 aa6.63□□□□□ -1.35
TRAPPC11-207ENST00000511409 NR6A1Q15406 480 aa6.63□□□□□ -1.35
TRAPPC11-207ENST00000511409 RC3H1Q5TC82 1133 aaKnown RBP6.63□□□□□ -1.35
TRAPPC11-207ENST00000511409 MPNDQ8N594 471 aa6.63□□□□□ -1.35
TRAPPC11-207ENST00000511409 ARMC2Q8NEN0 867 aa6.63□□□□□ -1.35
TRAPPC11-207ENST00000511409 EPS8L1Q8TE68 723 aa6.63□□□□□ -1.35
TRAPPC11-207ENST00000511409 MRGPRX2Q96LB1 330 aa6.63□□□□□ -1.35
TRAPPC11-207ENST00000511409 SIAH2O43255 324 aa6.62□□□□□ -1.35
TRAPPC11-207ENST00000511409 ZNF511Q8NB15 262 aa6.62□□□□□ -1.35
TRAPPC11-207ENST00000511409 TRIM34Q9BYJ4 488 aa6.62□□□□□ -1.35
TRAPPC11-207ENST00000511409 MAP10Q9P2G4 905 aa6.62□□□□□ -1.35
TRAPPC11-207ENST00000511409 NPAS3Q8IXF0 933 aa6.61□□□□□ -1.35
TRAPPC11-207ENST00000511409 FNBP4Q8N3X1 1017 aaPredicted RBP6.61□□□□□ -1.35
TRAPPC11-207ENST00000511409 PNMA1Q8ND90 353 aa6.61□□□□□ -1.35
TRAPPC11-207ENST00000511409 BAP1Q92560 729 aa6.61□□□□□ -1.35
TRAPPC11-207ENST00000511409 GPKOWQ92917 476 aaPredicted RBP eCLIP6.61□□□□□ -1.35
TRAPPC11-207ENST00000511409 FAM181BA6NEQ2 426 aa6.6□□□□□ -1.35
TRAPPC11-207ENST00000511409 J3QL48 77 aa6.6□□□□□ -1.35
TRAPPC11-207ENST00000511409 VARSP26640 1264 aaKnown RBP6.6□□□□□ -1.35
TRAPPC11-207ENST00000511409 ZC3H4Q9UPT8 1303 aaKnown RBP6.59□□□□□ -1.35
TRAPPC11-207ENST00000511409 WASHC4Q2M389 1173 aa6.58□□□□□ -1.36
TRAPPC11-207ENST00000511409 NBPF14Q5TI25 921 aa6.58□□□□□ -1.36
TRAPPC11-207ENST00000511409 SH3RF1Q7Z6J0 888 aa6.58□□□□□ -1.36
TRAPPC11-207ENST00000511409 EHBP1Q8NDI1 1231 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 234.5 ms