RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 ADGRF5Q8IZF2 1346 aa12.4□□□□□ -0.42
POLR2J3-215ENST00000511313 STARD3NLO95772 234 aa12.4□□□□□ -0.42
POLR2J3-215ENST00000511313 PRDM15P57071 1507 aaPredicted RBP12.39□□□□□ -0.43
POLR2J3-215ENST00000511313 CFAP44Q96MT7 982 aa12.39□□□□□ -0.43
POLR2J3-215ENST00000511313 ADGRL3Q9HAR2 1447 aa12.39□□□□□ -0.43
POLR2J3-215ENST00000511313 MYO3AQ8NEV4 1616 aa12.39□□□□□ -0.43
POLR2J3-215ENST00000511313 KIF6Q6ZMV9 814 aa12.38□□□□□ -0.43
POLR2J3-215ENST00000511313 QTRT2Q9H974 415 aaKnown RBP12.38□□□□□ -0.43
POLR2J3-215ENST00000511313 NSD3Q9BZ95 1437 aa12.38□□□□□ -0.43
POLR2J3-215ENST00000511313 WAPLQ7Z5K2 1190 aa12.38□□□□□ -0.43
POLR2J3-215ENST00000511313 TMOD3Q9NYL9 352 aa12.38□□□□□ -0.43
POLR2J3-215ENST00000511313 LTKP29376 864 aa12.37□□□□□ -0.43
POLR2J3-215ENST00000511313 MYOM2P54296 1465 aa12.37□□□□□ -0.43
POLR2J3-215ENST00000511313 MADDQ8WXG6 1647 aa12.37□□□□□ -0.43
POLR2J3-215ENST00000511313 TAF7LQ5H9L4 462 aa12.37□□□□□ -0.43
POLR2J3-215ENST00000511313 ACEP12821 1306 aa12.36□□□□□ -0.43
POLR2J3-215ENST00000511313 ZC3H6P61129 1189 aaKnown RBP12.36□□□□□ -0.43
POLR2J3-215ENST00000511313 TCP11L2Q8N4U5 519 aa12.36□□□□□ -0.43
POLR2J3-215ENST00000511313 PLEKHG3A1L390 1219 aa12.36□□□□□ -0.43
POLR2J3-215ENST00000511313 SBNO1A3KN83 1393 aa12.36□□□□□ -0.43
POLR2J3-215ENST00000511313 PANK3Q9H999 370 aa12.36□□□□□ -0.43
POLR2J3-215ENST00000511313 AK7Q96M32 723 aa12.36□□□□□ -0.43
POLR2J3-215ENST00000511313 WDHD1O75717 1129 aaPredicted RBP12.35□□□□□ -0.43
POLR2J3-215ENST00000511313 HSP90AB3PQ58FF7 597 aa12.35□□□□□ -0.43
POLR2J3-215ENST00000511313 MROH2AA6NES4 1674 aa12.35□□□□□ -0.43
POLR2J3-215ENST00000511313 IL2RBP14784 551 aa12.35□□□□□ -0.43
POLR2J3-215ENST00000511313 KLHL34Q8N239 644 aa12.35□□□□□ -0.43
POLR2J3-215ENST00000511313 USP35Q9P2H5 1018 aa12.35□□□□□ -0.43
POLR2J3-215ENST00000511313 BCORL1Q5H9F3 1711 aa12.35□□□□□ -0.43
POLR2J3-215ENST00000511313 LAS1LQ9Y4W2 734 aaKnown RBP12.34□□□□□ -0.43
POLR2J3-215ENST00000511313 IFNL2Q8IZJ0 200 aa12.34□□□□□ -0.43
POLR2J3-215ENST00000511313 DAXXQ9UER7 740 aaPredicted RBP12.34□□□□□ -0.43
POLR2J3-215ENST00000511313 ANKRD36BQ8N2N9 1353 aa12.34□□□□□ -0.43
POLR2J3-215ENST00000511313 ZNF330Q9Y3S2 320 aaPredicted RBP12.34□□□□□ -0.43
POLR2J3-215ENST00000511313 SMC4Q9NTJ3 1288 aa12.33□□□□□ -0.44
POLR2J3-215ENST00000511313 PDZRN3Q9UPQ7 1066 aa12.33□□□□□ -0.44
POLR2J3-215ENST00000511313 PTCH1Q13635 1447 aa12.33□□□□□ -0.44
POLR2J3-215ENST00000511313 ZNF530Q6P9A1 599 aaPredicted RBP12.33□□□□□ -0.44
POLR2J3-215ENST00000511313 UNC5CLQ8IV45 518 aa12.33□□□□□ -0.44
POLR2J3-215ENST00000511313 CLTCQ00610 1675 aaKnown RBP12.32□□□□□ -0.44
POLR2J3-215ENST00000511313 ABCA6Q8N139 1617 aa12.32□□□□□ -0.44
POLR2J3-215ENST00000511313 ZPR1O75312 459 aa12.32□□□□□ -0.44
POLR2J3-215ENST00000511313 LRRFIP1Q32MZ4 808 aaKnown RBP12.32□□□□□ -0.44
POLR2J3-215ENST00000511313 MYBBP1AQ9BQG0 1328 aaKnown RBP12.32□□□□□ -0.44
POLR2J3-215ENST00000511313 BLMP54132 1417 aaPredicted RBP12.32□□□□□ -0.44
POLR2J3-215ENST00000511313 GNAI1P63096 354 aa12.32□□□□□ -0.44
POLR2J3-215ENST00000511313 PREX1Q8TCU6 1659 aa12.32□□□□□ -0.44
POLR2J3-215ENST00000511313 RNF17Q9BXT8 1623 aaKnown RBP12.31□□□□□ -0.44
POLR2J3-215ENST00000511313 NUTM2GQ5VZR2 741 aa12.31□□□□□ -0.44
POLR2J3-215ENST00000511313 SPATA31D1Q6ZQQ2 1576 aa12.31□□□□□ -0.44
POLR2J3-215ENST00000511313 MTHFSP49914 203 aa12.31□□□□□ -0.44
POLR2J3-215ENST00000511313 DDX54Q8TDD1 881 aaKnown RBP12.31□□□□□ -0.44
POLR2J3-215ENST00000511313 KIF24Q5T7B8 1368 aa12.31□□□□□ -0.44
POLR2J3-215ENST00000511313 CDC42BPBQ9Y5S2 1711 aa12.31□□□□□ -0.44
POLR2J3-215ENST00000511313 FTSJ3Q8IY81 847 aaKnown RBP12.3□□□□□ -0.44
POLR2J3-215ENST00000511313 ZCRB1Q8TBF4 217 aaKnown RBP12.3□□□□□ -0.44
POLR2J3-215ENST00000511313 IQGAP3Q86VI3 1631 aa12.3□□□□□ -0.44
POLR2J3-215ENST00000511313 RBM33Q96EV2 1170 aaKnown RBP12.3□□□□□ -0.44
POLR2J3-215ENST00000511313 COL17A1Q9UMD9 1497 aaPredicted RBP12.3□□□□□ -0.44
POLR2J3-215ENST00000511313 NOL10Q9BSC4 688 aaKnown RBP12.29□□□□□ -0.44
POLR2J3-215ENST00000511313 GCC2Q8IWJ2 1684 aa12.29□□□□□ -0.44
POLR2J3-215ENST00000511313 UNC13BO14795 1591 aa12.29□□□□□ -0.44
POLR2J3-215ENST00000511313 XPCQ01831 940 aaPredicted RBP12.29□□□□□ -0.44
POLR2J3-215ENST00000511313 RBM42Q9BTD8 480 aaKnown RBP12.29□□□□□ -0.44
POLR2J3-215ENST00000511313 KIF1BO60333 1816 aa12.29□□□□□ -0.44
POLR2J3-215ENST00000511313 PCDH11XQ9BZA7 1347 aa12.28□□□□□ -0.44
POLR2J3-215ENST00000511313 PCDH11YQ9BZA8 1340 aa12.28□□□□□ -0.44
POLR2J3-215ENST00000511313 OS9Q13438 667 aaPredicted RBP12.28□□□□□ -0.44
POLR2J3-215ENST00000511313 KRT27Q7Z3Y8 459 aa12.28□□□□□ -0.44
POLR2J3-215ENST00000511313 POLR3AO14802 1390 aaPredicted RBP12.28□□□□□ -0.44
POLR2J3-215ENST00000511313 FAM9BQ8IZU0 186 aa12.28□□□□□ -0.44
POLR2J3-215ENST00000511313 ANKRD24Q8TF21 1146 aa12.28□□□□□ -0.44
POLR2J3-215ENST00000511313 BTG4Q9NY30 223 aa12.28□□□□□ -0.44
POLR2J3-215ENST00000511313 SBNO2Q9Y2G9 1366 aa12.28□□□□□ -0.44
POLR2J3-215ENST00000511313 CCER2I3L3R5 266 aa12.27□□□□□ -0.44
POLR2J3-215ENST00000511313 ATP7BP35670 1465 aa12.27□□□□□ -0.44
POLR2J3-215ENST00000511313 GCP02774 474 aa12.27□□□□□ -0.45
POLR2J3-215ENST00000511313 C16orf71Q8IYS4 520 aaPredicted RBP12.27□□□□□ -0.45
POLR2J3-215ENST00000511313 GGNBP2Q9H3C7 697 aa12.27□□□□□ -0.45
POLR2J3-215ENST00000511313 HMMRO75330 724 aa12.27□□□□□ -0.45
POLR2J3-215ENST00000511313 EDC4Q6P2E9 1401 aaKnown RBP12.27□□□□□ -0.45
POLR2J3-215ENST00000511313 RICTORQ6R327 1708 aa12.26□□□□□ -0.45
POLR2J3-215ENST00000511313 FRMPD1Q5SYB0 1578 aa12.26□□□□□ -0.45
POLR2J3-215ENST00000511313 FLT4P35916 1363 aa12.26□□□□□ -0.45
POLR2J3-215ENST00000511313 HTATSF1O43719 755 aaKnown RBP12.26□□□□□ -0.45
POLR2J3-215ENST00000511313 LAMC1P11047 1609 aa12.25□□□□□ -0.45
POLR2J3-215ENST00000511313 GPATCH3Q96I76 525 aa12.25□□□□□ -0.45
POLR2J3-215ENST00000511313 KIF13AQ9H1H9 1805 aa12.25□□□□□ -0.45
POLR2J3-215ENST00000511313 RALGAPBQ86X10 1494 aa12.25□□□□□ -0.45
POLR2J3-215ENST00000511313 AFF2P51816 1311 aa12.25□□□□□ -0.45
POLR2J3-215ENST00000511313 FCHSD2O94868 740 aa12.25□□□□□ -0.45
POLR2J3-215ENST00000511313 HSPA1LP34931 641 aa12.25□□□□□ -0.45
POLR2J3-215ENST00000511313 IP6K1Q92551 441 aa12.25□□□□□ -0.45
POLR2J3-215ENST00000511313 PRAG1Q86YV5 1406 aa12.25□□□□□ -0.45
POLR2J3-215ENST00000511313 KIDINS220Q9ULH0 1771 aa12.25□□□□□ -0.45
POLR2J3-215ENST00000511313 BRINP3Q76B58 766 aa12.25□□□□□ -0.45
POLR2J3-215ENST00000511313 RUNDC1Q96C34 613 aa12.24□□□□□ -0.45
POLR2J3-215ENST00000511313 CASC1Q6TDU7 716 aa12.24□□□□□ -0.45
POLR2J3-215ENST00000511313 RTL1A6NKG5 1358 aa12.24□□□□□ -0.45
POLR2J3-215ENST00000511313 KCNJ4P48050 445 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms