RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 JUNDP17535 347 aa9.58□□□□□ -0.88
HMGB1P47-201ENST00000511281 APLP1P51693 650 aa9.58□□□□□ -0.88
HMGB1P47-201ENST00000511281 ELOAQ14241 798 aaKnown RBP9.58□□□□□ -0.88
HMGB1P47-201ENST00000511281 TBC1D9Q6ZT07 1266 aa9.58□□□□□ -0.88
HMGB1P47-201ENST00000511281 SCUBE3Q8IX30 993 aa9.58□□□□□ -0.88
HMGB1P47-201ENST00000511281 NR1I2O75469 434 aa9.57□□□□□ -0.88
HMGB1P47-201ENST00000511281 MSS51Q4VC12 460 aa9.57□□□□□ -0.88
HMGB1P47-201ENST00000511281 TSR3Q9UJK0 312 aaKnown RBP9.57□□□□□ -0.88
HMGB1P47-201ENST00000511281 GPSM3Q9Y4H4 160 aa9.57□□□□□ -0.88
HMGB1P47-201ENST00000511281 PPP4CP60510 307 aa9.56□□□□□ -0.88
HMGB1P47-201ENST00000511281 TMCO4Q5TGY1 634 aa9.56□□□□□ -0.88
HMGB1P47-201ENST00000511281 GPKOWQ92917 476 aaPredicted RBP eCLIP9.56□□□□□ -0.88
HMGB1P47-201ENST00000511281 KANK4Q5T7N3 995 aaPredicted RBP9.55□□□□□ -0.88
HMGB1P47-201ENST00000511281 PLEKHM2Q8IWE5 1019 aa9.55□□□□□ -0.88
HMGB1P47-201ENST00000511281 ZNF592Q92610 1267 aa9.55□□□□□ -0.88
HMGB1P47-201ENST00000511281 GZF1Q9H116 711 aaPredicted RBP9.55□□□□□ -0.88
HMGB1P47-201ENST00000511281 PCDHB3Q9Y5E6 796 aa9.55□□□□□ -0.88
HMGB1P47-201ENST00000511281 MCCD1P59942 119 aaPredicted RBP9.54□□□□□ -0.88
HMGB1P47-201ENST00000511281 RGS22Q8NE09 1264 aa9.54□□□□□ -0.88
HMGB1P47-201ENST00000511281 HPS5Q9UPZ3 1129 aa9.54□□□□□ -0.88
HMGB1P47-201ENST00000511281 DXOO77932 396 aaKnown RBP9.53□□□□□ -0.88
HMGB1P47-201ENST00000511281 MMP16P51512 607 aa9.53□□□□□ -0.88
HMGB1P47-201ENST00000511281 MAP10Q9P2G4 905 aa9.53□□□□□ -0.88
HMGB1P47-201ENST00000511281 PDXDC2PQ6P474 469 aa9.52□□□□□ -0.89
HMGB1P47-201ENST00000511281 ARMC2Q8NEN0 867 aa9.52□□□□□ -0.89
HMGB1P47-201ENST00000511281 VRTNQ9H8Y1 702 aa9.52□□□□□ -0.89
HMGB1P47-201ENST00000511281 EVA1BQ9NVM1 165 aa9.52□□□□□ -0.89
HMGB1P47-201ENST00000511281 GOLGA8CPA6NN73 597 aa9.5□□□□□ -0.89
HMGB1P47-201ENST00000511281 CCNYL3P0C7X3 344 aa9.5□□□□□ -0.89
HMGB1P47-201ENST00000511281 BCAMP50895 628 aa9.5□□□□□ -0.89
HMGB1P47-201ENST00000511281 MFAP1P55081 439 aaKnown RBP9.5□□□□□ -0.89
HMGB1P47-201ENST00000511281 CHIC2Q9UKJ5 165 aa9.5□□□□□ -0.89
HMGB1P47-201ENST00000511281 PIK3CDO00329 1044 aa9.49□□□□□ -0.89
HMGB1P47-201ENST00000511281 KCNH2Q12809 1159 aa9.49□□□□□ -0.89
HMGB1P47-201ENST00000511281 FAM160A2Q8N612 972 aaPredicted RBP9.49□□□□□ -0.89
HMGB1P47-201ENST00000511281 OCSTAMPQ9BR26 566 aa9.49□□□□□ -0.89
HMGB1P47-201ENST00000511281 GNEQ9Y223 722 aaKnown RBP9.49□□□□□ -0.89
HMGB1P47-201ENST00000511281 USP17L3A6NCW0 530 aa9.48□□□□□ -0.89
HMGB1P47-201ENST00000511281 USP17L4A6NCW7 530 aa9.48□□□□□ -0.89
HMGB1P47-201ENST00000511281 FAM196BA6NMK8 535 aa9.48□□□□□ -0.89
HMGB1P47-201ENST00000511281 USP17L5A8MUK1 530 aa9.48□□□□□ -0.89
HMGB1P47-201ENST00000511281 LZTS3O60299 673 aaPredicted RBP9.48□□□□□ -0.89
HMGB1P47-201ENST00000511281 PTK2Q05397 1052 aa9.48□□□□□ -0.89
HMGB1P47-201ENST00000511281 B4GALNT3Q6L9W6 998 aa9.48□□□□□ -0.89
HMGB1P47-201ENST00000511281 USP17L2Q6R6M4 530 aa9.48□□□□□ -0.89
HMGB1P47-201ENST00000511281 USP17L1Q7RTZ2 530 aa9.48□□□□□ -0.89
HMGB1P47-201ENST00000511281 WNT2BQ93097 391 aa9.48□□□□□ -0.89
HMGB1P47-201ENST00000511281 NBPF14Q5TI25 921 aa9.47□□□□□ -0.89
HMGB1P47-201ENST00000511281 PHTF2Q8N3S3 785 aa9.47□□□□□ -0.89
HMGB1P47-201ENST00000511281 FAM174AQ8TBP5 190 aa9.47□□□□□ -0.89
HMGB1P47-201ENST00000511281 NUDT12Q9BQG2 462 aa9.47□□□□□ -0.89
HMGB1P47-201ENST00000511281 ZMIZ1Q9ULJ6 1067 aa9.47□□□□□ -0.89
HMGB1P47-201ENST00000511281 STAC3Q96MF2 364 aa9.46□□□□□ -0.9
HMGB1P47-201ENST00000511281 SPSB2Q99619 263 aa9.46□□□□□ -0.9
HMGB1P47-201ENST00000511281 CEP126Q9P2H0 1117 aa9.46□□□□□ -0.9
HMGB1P47-201ENST00000511281 CARNS1A5YM72 827 aa9.45□□□□□ -0.9
HMGB1P47-201ENST00000511281 CTHP32929 405 aa9.45□□□□□ -0.9
HMGB1P47-201ENST00000511281 CDCA8Q53HL2 280 aa9.45□□□□□ -0.9
HMGB1P47-201ENST00000511281 LCE2DQ5TA82 110 aaPredicted RBP9.45□□□□□ -0.9
HMGB1P47-201ENST00000511281 NYAP1Q6ZVC0 841 aa9.45□□□□□ -0.9
HMGB1P47-201ENST00000511281 SKIP12755 728 aa9.44□□□□□ -0.9
HMGB1P47-201ENST00000511281 WBP1LQ9NX94 342 aa9.44□□□□□ -0.9
HMGB1P47-201ENST00000511281 TMEM164Q5U3C3 297 aa9.43□□□□□ -0.9
HMGB1P47-201ENST00000511281 SND1Q7KZF4 910 aaKnown RBP eCLIP9.43□□□□□ -0.9
HMGB1P47-201ENST00000511281 IVNS1ABPQ9Y6Y0 642 aa9.43□□□□□ -0.9
HMGB1P47-201ENST00000511281 ATP5J2-PTCD1G3V325 749 aa9.42□□□□□ -0.9
HMGB1P47-201ENST00000511281 MAP7D1Q3KQU3 841 aa9.42□□□□□ -0.9
HMGB1P47-201ENST00000511281 SH3BP5LQ7L8J4 393 aa9.42□□□□□ -0.9
HMGB1P47-201ENST00000511281 NOVA2Q9UNW9 492 aaKnown RBP9.42□□□□□ -0.9
HMGB1P47-201ENST00000511281 MTMR7Q9Y216 660 aa9.42□□□□□ -0.9
HMGB1P47-201ENST00000511281 USP17L15C9J2P7 530 aa9.41□□□□□ -0.9
HMGB1P47-201ENST00000511281 USP17L10C9JJH3 530 aa9.41□□□□□ -0.9
HMGB1P47-201ENST00000511281 USP17L13C9JLJ4 530 aa9.41□□□□□ -0.9
HMGB1P47-201ENST00000511281 USP17L12C9JPN9 530 aa9.41□□□□□ -0.9
HMGB1P47-201ENST00000511281 USP17L11C9JVI0 530 aa9.41□□□□□ -0.9
HMGB1P47-201ENST00000511281 USP17L21D6R901 530 aa9.41□□□□□ -0.9
HMGB1P47-201ENST00000511281 USP17L18D6R9N7 530 aa9.41□□□□□ -0.9
HMGB1P47-201ENST00000511281 USP17L22D6RA61 530 aa9.41□□□□□ -0.9
HMGB1P47-201ENST00000511281 USP17L17D6RBQ6 530 aa9.41□□□□□ -0.9
HMGB1P47-201ENST00000511281 USP17L19D6RCP7 530 aa9.41□□□□□ -0.9
HMGB1P47-201ENST00000511281 USP17L20D6RJB6 530 aa9.41□□□□□ -0.9
HMGB1P47-201ENST00000511281 ADH1BP00325 375 aa9.41□□□□□ -0.9
HMGB1P47-201ENST00000511281 USP17L24Q0WX57 530 aa9.41□□□□□ -0.9
HMGB1P47-201ENST00000511281 PTK7Q13308 1070 aa9.41□□□□□ -0.9
HMGB1P47-201ENST00000511281 SLFNL1Q499Z3 407 aa9.41□□□□□ -0.9
HMGB1P47-201ENST00000511281 THSD4Q6ZMP0 1018 aa9.41□□□□□ -0.9
HMGB1P47-201ENST00000511281 ANKRD13DQ6ZTN6 518 aa9.41□□□□□ -0.9
HMGB1P47-201ENST00000511281 STK32AQ8WU08 396 aa9.41□□□□□ -0.9
HMGB1P47-201ENST00000511281 FAM163AQ96GL9 167 aaPredicted RBP9.41□□□□□ -0.9
HMGB1P47-201ENST00000511281 TXNDC2Q86VQ3 553 aa9.4□□□□□ -0.9
HMGB1P47-201ENST00000511281 RNF135Q8IUD6 432 aa9.4□□□□□ -0.9
HMGB1P47-201ENST00000511281 PLPP7Q8NBV4 271 aa9.4□□□□□ -0.9
HMGB1P47-201ENST00000511281 PRDM9Q9NQV7 894 aa9.4□□□□□ -0.9
HMGB1P47-201ENST00000511281 MKRN1Q9UHC7 482 aaKnown RBP9.4□□□□□ -0.9
HMGB1P47-201ENST00000511281 ZPR1O75312 459 aa9.39□□□□□ -0.91
HMGB1P47-201ENST00000511281 FAM69CQ0P6D2 419 aa9.39□□□□□ -0.91
HMGB1P47-201ENST00000511281 NCOA4Q13772 614 aa9.39□□□□□ -0.91
HMGB1P47-201ENST00000511281 CRTC2Q53ET0 693 aaPredicted RBP9.39□□□□□ -0.91
HMGB1P47-201ENST00000511281 TRAF7Q6Q0C0 670 aa9.39□□□□□ -0.91
HMGB1P47-201ENST00000511281 SH3RF1Q7Z6J0 888 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms