RNA–Protein interactions for RNA: ENST00000511241.5

LINC01088-207, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 679 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-207ENST00000511241 PTPRNQ16849 979 aa13.4□□□□□ -0.26
LINC01088-207ENST00000511241 ZNF516Q92618 1163 aa13.4□□□□□ -0.26
LINC01088-207ENST00000511241 GJD4Q96KN9 370 aaPredicted RBP13.4□□□□□ -0.26
LINC01088-207ENST00000511241 PER1O15534 1290 aaPredicted RBP13.39□□□□□ -0.27
LINC01088-207ENST00000511241 TLL1O43897 1013 aa13.39□□□□□ -0.27
LINC01088-207ENST00000511241 DXOO77932 396 aaKnown RBP13.39□□□□□ -0.27
LINC01088-207ENST00000511241 HMX1Q9NP08 348 aaPredicted RBP13.38□□□□□ -0.27
LINC01088-207ENST00000511241 NDUFB9Q9Y6M9 179 aa13.38□□□□□ -0.27
LINC01088-207ENST00000511241 POM121Q96HA1 1249 aa13.37□□□□□ -0.27
LINC01088-207ENST00000511241 TRIM34Q9BYJ4 488 aa13.37□□□□□ -0.27
LINC01088-207ENST00000511241 SLC6A16Q9GZN6 736 aa13.37□□□□□ -0.27
LINC01088-207ENST00000511241 ITGBL1O95965 494 aaPredicted RBP13.36□□□□□ -0.27
LINC01088-207ENST00000511241 KCNC4Q03721 635 aa13.36□□□□□ -0.27
LINC01088-207ENST00000511241 PROSER2Q86WR7 435 aaPredicted RBP13.36□□□□□ -0.27
LINC01088-207ENST00000511241 MMRN1Q13201 1228 aa13.35□□□□□ -0.27
LINC01088-207ENST00000511241 WWC1Q8IX03 1113 aa13.35□□□□□ -0.27
LINC01088-207ENST00000511241 GDPD2Q9HCC8 539 aa13.35□□□□□ -0.27
LINC01088-207ENST00000511241 TRAK2O60296 914 aa13.34□□□□□ -0.27
LINC01088-207ENST00000511241 PNMA1Q8ND90 353 aa13.34□□□□□ -0.27
LINC01088-207ENST00000511241 NUDT12Q9BQG2 462 aa13.33□□□□□ -0.28
LINC01088-207ENST00000511241 TBC1D2BQ9UPU7 963 aa13.33□□□□□ -0.28
LINC01088-207ENST00000511241 F12P00748 615 aaPredicted RBP13.32□□□□□ -0.28
LINC01088-207ENST00000511241 CCNYL3P0C7X3 344 aa13.32□□□□□ -0.28
LINC01088-207ENST00000511241 NR6A1Q15406 480 aa13.32□□□□□ -0.28
LINC01088-207ENST00000511241 FNBP4Q8N3X1 1017 aaPredicted RBP13.32□□□□□ -0.28
LINC01088-207ENST00000511241 PRDM9Q9NQV7 894 aa13.32□□□□□ -0.28
LINC01088-207ENST00000511241 EVA1BQ9NVM1 165 aa13.32□□□□□ -0.28
LINC01088-207ENST00000511241 NKX2-3Q8TAU0 364 aa13.31□□□□□ -0.28
LINC01088-207ENST00000511241 ZNF608Q9ULD9 1512 aaPredicted RBP13.3□□□□□ -0.28
LINC01088-207ENST00000511241 ABL2P42684 1182 aa13.3□□□□□ -0.28
LINC01088-207ENST00000511241 KCNH2Q12809 1159 aa13.29□□□□□ -0.28
LINC01088-207ENST00000511241 EPS8L1Q8TE68 723 aa13.29□□□□□ -0.28
LINC01088-207ENST00000511241 SUPT5HO00267 1087 aaKnown RBP13.28□□□□□ -0.28
LINC01088-207ENST00000511241 CTHP32929 405 aa13.28□□□□□ -0.28
LINC01088-207ENST00000511241 TOPBP1Q92547 1522 aa13.28□□□□□ -0.28
LINC01088-207ENST00000511241 S1PR4O95977 384 aa13.27□□□□□ -0.29
LINC01088-207ENST00000511241 PRDM2Q13029 1718 aa13.27□□□□□ -0.29
LINC01088-207ENST00000511241 ARMC2Q8NEN0 867 aa13.26□□□□□ -0.29
LINC01088-207ENST00000511241 MAP10Q9P2G4 905 aa13.26□□□□□ -0.29
LINC01088-207ENST00000511241 ZC3H4Q9UPT8 1303 aaKnown RBP13.26□□□□□ -0.29
LINC01088-207ENST00000511241 WASHC4Q2M389 1173 aa13.25□□□□□ -0.29
LINC01088-207ENST00000511241 ZNF330Q9Y3S2 320 aaPredicted RBP13.25□□□□□ -0.29
LINC01088-207ENST00000511241 GGCXP38435 758 aa13.24□□□□□ -0.29
LINC01088-207ENST00000511241 FKBPLQ9UIM3 349 aa13.24□□□□□ -0.29
LINC01088-207ENST00000511241 IFT140Q96RY7 1462 aa13.23□□□□□ -0.29
LINC01088-207ENST00000511241 GPR37L1O60883 481 aa13.23□□□□□ -0.29
LINC01088-207ENST00000511241 IRF5Q13568 498 aa13.23□□□□□ -0.29
LINC01088-207ENST00000511241 CCDC24Q8N4L8 307 aa13.23□□□□□ -0.29
LINC01088-207ENST00000511241 GPKOWQ92917 476 aaPredicted RBP eCLIP13.22□□□□□ -0.29
LINC01088-207ENST00000511241 FCF1Q9Y324 198 aaKnown RBP13.2□□□□□ -0.3
LINC01088-207ENST00000511241 DNMBPQ6XZF7 1577 aa13.2□□□□□ -0.3
LINC01088-207ENST00000511241 IFFO2Q5TF58 517 aa13.19□□□□□ -0.3
LINC01088-207ENST00000511241 AQRO60306 1485 aaKnown RBP eCLIP13.18□□□□□ -0.3
LINC01088-207ENST00000511241 NBPF14Q5TI25 921 aa13.18□□□□□ -0.3
LINC01088-207ENST00000511241 UNC93B1Q9H1C4 597 aa13.18□□□□□ -0.3
LINC01088-207ENST00000511241 ZNF777Q9ULD5 760 aaPredicted RBP13.18□□□□□ -0.3
LINC01088-207ENST00000511241 ANKLE1Q8NAG6 615 aa13.17□□□□□ -0.3
LINC01088-207ENST00000511241 PTCRAQ6ISU1 281 aaPredicted RBP13.16□□□□□ -0.3
LINC01088-207ENST00000511241 PDXDC2PQ6P474 469 aa13.16□□□□□ -0.3
LINC01088-207ENST00000511241 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.16□□□□□ -0.3
LINC01088-207ENST00000511241 GPSM3Q9Y4H4 160 aa13.16□□□□□ -0.3
LINC01088-207ENST00000511241 POLA1P09884 1462 aaPredicted RBP13.16□□□□□ -0.3
LINC01088-207ENST00000511241 RAD54L2Q9Y4B4 1467 aa13.16□□□□□ -0.3
LINC01088-207ENST00000511241 EIF4G3O43432 1585 aaKnown RBP13.15□□□□□ -0.3
LINC01088-207ENST00000511241 ABCC8Q09428 1581 aa13.15□□□□□ -0.3
LINC01088-207ENST00000511241 RNF223E7ERA6 249 aa13.15□□□□□ -0.3
LINC01088-207ENST00000511241 TARBP1Q13395 1621 aaKnown RBP13.14□□□□□ -0.31
LINC01088-207ENST00000511241 ZBBXA8MT70 800 aa13.14□□□□□ -0.31
LINC01088-207ENST00000511241 PPP1R18Q6NYC8 613 aa13.14□□□□□ -0.31
LINC01088-207ENST00000511241 ARID3CA6NKF2 412 aa13.13□□□□□ -0.31
LINC01088-207ENST00000511241 PPEF1O14829 653 aaPredicted RBP13.13□□□□□ -0.31
LINC01088-207ENST00000511241 SOX11P35716 441 aa13.13□□□□□ -0.31
LINC01088-207ENST00000511241 PTK2Q05397 1052 aa13.13□□□□□ -0.31
LINC01088-207ENST00000511241 NR1H3Q13133 447 aa13.13□□□□□ -0.31
LINC01088-207ENST00000511241 ZBTB24O43167 697 aaPredicted RBP13.12□□□□□ -0.31
LINC01088-207ENST00000511241 VAC14Q08AM6 782 aa13.12□□□□□ -0.31
LINC01088-207ENST00000511241 TDRD9Q8NDG6 1382 aaKnown RBP13.11□□□□□ -0.31
LINC01088-207ENST00000511241 C1orf115Q9H7X2 142 aa13.11□□□□□ -0.31
LINC01088-207ENST00000511241 PLSCR2Q9NRY7 297 aa13.11□□□□□ -0.31
LINC01088-207ENST00000511241 CUX1P39880 1505 aa13.1□□□□□ -0.31
LINC01088-207ENST00000511241 SOGA1O94964 1423 aa13.1□□□□□ -0.31
LINC01088-207ENST00000511241 POM121CA8CG34 1229 aa13.09□□□□□ -0.31
LINC01088-207ENST00000511241 FBXO45P0C2W1 286 aa13.09□□□□□ -0.31
LINC01088-207ENST00000511241 EIF4G2P78344 907 aaKnown RBP eCLIP13.09□□□□□ -0.31
LINC01088-207ENST00000511241 BAP1Q92560 729 aa13.08□□□□□ -0.32
LINC01088-207ENST00000511241 ZNF592Q92610 1267 aa13.08□□□□□ -0.32
LINC01088-207ENST00000511241 RIMBP3CA6NJZ7 1639 aa13.08□□□□□ -0.32
LINC01088-207ENST00000511241 RIMBP3BA6NNM3 1639 aa13.08□□□□□ -0.32
LINC01088-207ENST00000511241 RIMBP3Q9UFD9 1639 aa13.08□□□□□ -0.32
LINC01088-207ENST00000511241 FGD5Q6ZNL6 1462 aa13.08□□□□□ -0.32
LINC01088-207ENST00000511241 RPIAP49247 311 aa13.07□□□□□ -0.32
LINC01088-207ENST00000511241 CALR3Q96L12 384 aaKnown RBP13.07□□□□□ -0.32
LINC01088-207ENST00000511241 MCCD1P59942 119 aaPredicted RBP13.06□□□□□ -0.32
LINC01088-207ENST00000511241 SH3BP5LQ7L8J4 393 aa13.06□□□□□ -0.32
LINC01088-207ENST00000511241 GLMNQ92990 594 aa13.06□□□□□ -0.32
LINC01088-207ENST00000511241 SERPINA10Q9UK55 444 aa13.06□□□□□ -0.32
LINC01088-207ENST00000511241 HDGFL1Q5TGJ6 251 aa13.05□□□□□ -0.32
LINC01088-207ENST00000511241 BPHLQ86WA6 291 aaPredicted RBP13.05□□□□□ -0.32
LINC01088-207ENST00000511241 ZNF511Q8NB15 262 aa13.05□□□□□ -0.32
LINC01088-207ENST00000511241 ARHGAP9Q9BRR9 750 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms