RNA–Protein interactions for RNA: ENST00000511129.2

SCARB2-205, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-205ENST00000511129 PNMA1Q8ND90 353 aa8.62□□□□□ -1.03
SCARB2-205ENST00000511129 PRDM9Q9NQV7 894 aa8.62□□□□□ -1.03
SCARB2-205ENST00000511129 ZNF598Q86UK7 904 aaKnown RBP8.61□□□□□ -1.03
SCARB2-205ENST00000511129 WWC1Q8IX03 1113 aa8.61□□□□□ -1.03
SCARB2-205ENST00000511129 CCDC24Q8N4L8 307 aa8.61□□□□□ -1.03
SCARB2-205ENST00000511129 NUDT12Q9BQG2 462 aa8.61□□□□□ -1.03
SCARB2-205ENST00000511129 CCNYL3P0C7X3 344 aa8.6□□□□□ -1.03
SCARB2-205ENST00000511129 CLUAP1Q96AJ1 413 aa8.6□□□□□ -1.03
SCARB2-205ENST00000511129 HMX1Q9NP08 348 aaPredicted RBP8.6□□□□□ -1.03
SCARB2-205ENST00000511129 NDUFB9Q9Y6M9 179 aa8.6□□□□□ -1.03
SCARB2-205ENST00000511129 NR6A1Q15406 480 aa8.59□□□□□ -1.03
SCARB2-205ENST00000511129 COG6Q9Y2V7 657 aa8.59□□□□□ -1.03
SCARB2-205ENST00000511129 A6NJR5 290 aa8.58□□□□□ -1.04
SCARB2-205ENST00000511129 PRR20EP86478 221 aa8.58□□□□□ -1.04
SCARB2-205ENST00000511129 PRR20CP86479 221 aa8.58□□□□□ -1.04
SCARB2-205ENST00000511129 PRR20DP86480 221 aa8.58□□□□□ -1.04
SCARB2-205ENST00000511129 PRR20BP86481 221 aa8.58□□□□□ -1.04
SCARB2-205ENST00000511129 PRR20AP86496 221 aa8.58□□□□□ -1.04
SCARB2-205ENST00000511129 PLA2G2CQ5R387 149 aa8.58□□□□□ -1.04
SCARB2-205ENST00000511129 ZNF697Q5TEC3 545 aa8.58□□□□□ -1.04
SCARB2-205ENST00000511129 GDPD2Q9HCC8 539 aa8.58□□□□□ -1.04
SCARB2-205ENST00000511129 EVA1BQ9NVM1 165 aa8.58□□□□□ -1.04
SCARB2-205ENST00000511129 ABL2P42684 1182 aa8.57□□□□□ -1.04
SCARB2-205ENST00000511129 KCNH2Q12809 1159 aa8.57□□□□□ -1.04
SCARB2-205ENST00000511129 ZNF787Q6DD87 383 aa8.57□□□□□ -1.04
SCARB2-205ENST00000511129 GJD4Q96KN9 370 aaPredicted RBP8.57□□□□□ -1.04
SCARB2-205ENST00000511129 TRIM34Q9BYJ4 488 aa8.57□□□□□ -1.04
SCARB2-205ENST00000511129 ARMC2Q8NEN0 867 aa8.56□□□□□ -1.04
SCARB2-205ENST00000511129 POM121Q96HA1 1249 aa8.56□□□□□ -1.04
SCARB2-205ENST00000511129 MAP10Q9P2G4 905 aa8.56□□□□□ -1.04
SCARB2-205ENST00000511129 TBC1D2BQ9UPU7 963 aa8.56□□□□□ -1.04
SCARB2-205ENST00000511129 FCF1Q9Y324 198 aaKnown RBP8.56□□□□□ -1.04
SCARB2-205ENST00000511129 GDF9O60383 454 aa8.55□□□□□ -1.04
SCARB2-205ENST00000511129 F12P00748 615 aaPredicted RBP8.55□□□□□ -1.04
SCARB2-205ENST00000511129 PKDCCQ504Y2 493 aa8.55□□□□□ -1.04
SCARB2-205ENST00000511129 PROSER2Q86WR7 435 aaPredicted RBP8.55□□□□□ -1.04
SCARB2-205ENST00000511129 EPS8L1Q8TE68 723 aa8.55□□□□□ -1.04
SCARB2-205ENST00000511129 DGAT1O75907 488 aa8.54□□□□□ -1.04
SCARB2-205ENST00000511129 TNFRSF10AO00220 468 aa8.53□□□□□ -1.04
SCARB2-205ENST00000511129 ZBTB24O43167 697 aaPredicted RBP8.53□□□□□ -1.04
SCARB2-205ENST00000511129 FKBPLQ9UIM3 349 aa8.53□□□□□ -1.04
SCARB2-205ENST00000511129 ZNF330Q9Y3S2 320 aaPredicted RBP8.52□□□□□ -1.05
SCARB2-205ENST00000511129 TRAK2O60296 914 aa8.51□□□□□ -1.05
SCARB2-205ENST00000511129 WASHC4Q2M389 1173 aa8.51□□□□□ -1.05
SCARB2-205ENST00000511129 NBPF14Q5TI25 921 aa8.51□□□□□ -1.05
SCARB2-205ENST00000511129 UNC93B1Q9H1C4 597 aa8.51□□□□□ -1.05
SCARB2-205ENST00000511129 ZC3H4Q9UPT8 1303 aaKnown RBP8.51□□□□□ -1.05
SCARB2-205ENST00000511129 PTCRAQ6ISU1 281 aaPredicted RBP8.5□□□□□ -1.05
SCARB2-205ENST00000511129 GPKOWQ92917 476 aaPredicted RBP eCLIP8.5□□□□□ -1.05
SCARB2-205ENST00000511129 FAM187AA6NFU0 413 aa8.49□□□□□ -1.05
SCARB2-205ENST00000511129 SUPT5HO00267 1087 aaKnown RBP8.49□□□□□ -1.05
SCARB2-205ENST00000511129 PKD2L1Q9P0L9 805 aa8.49□□□□□ -1.05
SCARB2-205ENST00000511129 RPIAP49247 311 aa8.48□□□□□ -1.05
SCARB2-205ENST00000511129 PTK2Q05397 1052 aa8.48□□□□□ -1.05
SCARB2-205ENST00000511129 FNBP4Q8N3X1 1017 aaPredicted RBP8.48□□□□□ -1.05
SCARB2-205ENST00000511129 ZNF775Q96BV0 537 aaPredicted RBP8.48□□□□□ -1.05
SCARB2-205ENST00000511129 FOXC1Q12948 553 aa8.47□□□□□ -1.05
SCARB2-205ENST00000511129 PDXDC2PQ6P474 469 aa8.47□□□□□ -1.05
SCARB2-205ENST00000511129 ABCC9O60706 1549 aa8.47□□□□□ -1.05
SCARB2-205ENST00000511129 CD2BP2O95400 341 aaKnown RBP8.46□□□□□ -1.06
SCARB2-205ENST00000511129 IRF5Q13568 498 aa8.46□□□□□ -1.06
SCARB2-205ENST00000511129 AGERQ15109 404 aa8.46□□□□□ -1.06
SCARB2-205ENST00000511129 BAP1Q92560 729 aa8.46□□□□□ -1.06
SCARB2-205ENST00000511129 ZNF777Q9ULD5 760 aaPredicted RBP8.46□□□□□ -1.06
SCARB2-205ENST00000511129 ZBBXA8MT70 800 aa8.45□□□□□ -1.06
SCARB2-205ENST00000511129 POTECB2RU33 542 aa8.45□□□□□ -1.06
SCARB2-205ENST00000511129 VAC14Q08AM6 782 aa8.45□□□□□ -1.06
SCARB2-205ENST00000511129 LINC01559Q495D7 138 aa8.45□□□□□ -1.06
SCARB2-205ENST00000511129 GPSM3Q9Y4H4 160 aa8.45□□□□□ -1.06
SCARB2-205ENST00000511129 NR1H3Q13133 447 aa8.44□□□□□ -1.06
SCARB2-205ENST00000511129 ZBTB33Q86T24 672 aa8.44□□□□□ -1.06
SCARB2-205ENST00000511129 ST8SIA5O15466 376 aa8.43□□□□□ -1.06
SCARB2-205ENST00000511129 GPR37L1O60883 481 aa8.43□□□□□ -1.06
SCARB2-205ENST00000511129 EIF4G2P78344 907 aaKnown RBP eCLIP8.43□□□□□ -1.06
SCARB2-205ENST00000511129 TRIM32Q13049 653 aa8.43□□□□□ -1.06
SCARB2-205ENST00000511129 BPHLQ86WA6 291 aaPredicted RBP8.43□□□□□ -1.06
SCARB2-205ENST00000511129 ZNF511Q8NB15 262 aa8.43□□□□□ -1.06
SCARB2-205ENST00000511129 ZNF592Q92610 1267 aa8.43□□□□□ -1.06
SCARB2-205ENST00000511129 ARHGAP9Q9BRR9 750 aa8.43□□□□□ -1.06
SCARB2-205ENST00000511129 AAASQ9NRG9 546 aa8.43□□□□□ -1.06
SCARB2-205ENST00000511129 FBXO45P0C2W1 286 aa8.42□□□□□ -1.06
SCARB2-205ENST00000511129 SOX11P35716 441 aa8.42□□□□□ -1.06
SCARB2-205ENST00000511129 TOR4AQ9NXH8 423 aa8.42□□□□□ -1.06
SCARB2-205ENST00000511129 PODXL2Q9NZ53 605 aa8.42□□□□□ -1.06
SCARB2-205ENST00000511129 MAGEB6P1A0A0J9YX57 407 aa8.41□□□□□ -1.06
SCARB2-205ENST00000511129 ARID3CA6NKF2 412 aa8.41□□□□□ -1.06
SCARB2-205ENST00000511129 WNT7BP56706 349 aa8.41□□□□□ -1.06
SCARB2-205ENST00000511129 SEMA3FQ13275 785 aa8.41□□□□□ -1.06
SCARB2-205ENST00000511129 CALR3Q96L12 384 aaKnown RBP8.41□□□□□ -1.06
SCARB2-205ENST00000511129 SH3BP5LQ7L8J4 393 aa8.4□□□□□ -1.06
SCARB2-205ENST00000511129 CARD14Q9BXL6 1004 aa8.4□□□□□ -1.06
SCARB2-205ENST00000511129 POM121CA8CG34 1229 aa8.39□□□□□ -1.07
SCARB2-205ENST00000511129 MCCD1P59942 119 aaPredicted RBP8.39□□□□□ -1.07
SCARB2-205ENST00000511129 SH3BP2P78314 561 aa8.39□□□□□ -1.07
SCARB2-205ENST00000511129 HDGFL1Q5TGJ6 251 aa8.39□□□□□ -1.07
SCARB2-205ENST00000511129 CRIPAKQ8N1N5 446 aa8.39□□□□□ -1.07
SCARB2-205ENST00000511129 FOXJ1Q92949 421 aa8.39□□□□□ -1.07
SCARB2-205ENST00000511129 PCDHB9Q9Y5E1 797 aa8.39□□□□□ -1.07
SCARB2-205ENST00000511129 AVPP01185 164 aa8.38□□□□□ -1.07
SCARB2-205ENST00000511129 DZIP3Q86Y13 1208 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms