RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 BRINP3Q76B58 766 aa10.87□□□□□ -0.67
SMAD1-209ENST00000511125 EMILIN1Q9Y6C2 1016 aa10.87□□□□□ -0.67
SMAD1-209ENST00000511125 MYOM1P52179 1685 aa10.87□□□□□ -0.67
SMAD1-209ENST00000511125 LTV1Q96GA3 475 aaPredicted RBP10.87□□□□□ -0.67
SMAD1-209ENST00000511125 ZNF692Q9BU19 519 aaPredicted RBP10.87□□□□□ -0.67
SMAD1-209ENST00000511125 RALBP1Q15311 655 aa10.86□□□□□ -0.67
SMAD1-209ENST00000511125 MYBBP1AQ9BQG0 1328 aaKnown RBP10.86□□□□□ -0.67
SMAD1-209ENST00000511125 KNDC1Q76NI1 1749 aa10.86□□□□□ -0.67
SMAD1-209ENST00000511125 ZC3H6P61129 1189 aaKnown RBP10.86□□□□□ -0.67
SMAD1-209ENST00000511125 PUS7Q96PZ0 661 aaKnown RBP10.85□□□□□ -0.67
SMAD1-209ENST00000511125 C1orf167Q5SNV9 1468 aa10.85□□□□□ -0.67
SMAD1-209ENST00000511125 U2SURPO15042 1029 aaKnown RBP10.85□□□□□ -0.67
SMAD1-209ENST00000511125 CCDC146Q8IYE0 955 aa10.85□□□□□ -0.67
SMAD1-209ENST00000511125 HAP1P54257 671 aaPredicted RBP10.84□□□□□ -0.67
SMAD1-209ENST00000511125 HNRNPUQ00839 825 aaKnown RBP eCLIP10.84□□□□□ -0.67
SMAD1-209ENST00000511125 NLRP13Q86W25 1043 aa10.83□□□□□ -0.67
SMAD1-209ENST00000511125 USP32Q8NFA0 1604 aa10.83□□□□□ -0.68
SMAD1-209ENST00000511125 USP6P35125 1406 aa10.83□□□□□ -0.68
SMAD1-209ENST00000511125 MST1RQ04912 1400 aa10.83□□□□□ -0.68
SMAD1-209ENST00000511125 CPSF1Q10570 1443 aaKnown RBP10.83□□□□□ -0.68
SMAD1-209ENST00000511125 NEUROD2Q15784 382 aa10.82□□□□□ -0.68
SMAD1-209ENST00000511125 PARD3Q8TEW0 1356 aa10.82□□□□□ -0.68
SMAD1-209ENST00000511125 NUTM2BA6NNL0 878 aaPredicted RBP10.82□□□□□ -0.68
SMAD1-209ENST00000511125 NUTM2EB1AL46 878 aaPredicted RBP10.82□□□□□ -0.68
SMAD1-209ENST00000511125 CHRNA2Q15822 529 aa10.82□□□□□ -0.68
SMAD1-209ENST00000511125 NUTM2AQ8IVF1 878 aaPredicted RBP10.82□□□□□ -0.68
SMAD1-209ENST00000511125 CCER2I3L3R5 266 aa10.81□□□□□ -0.68
SMAD1-209ENST00000511125 ADAMTS8Q9UP79 889 aa10.81□□□□□ -0.68
SMAD1-209ENST00000511125 NINLQ9Y2I6 1382 aa10.81□□□□□ -0.68
SMAD1-209ENST00000511125 AMPHP49418 695 aa10.81□□□□□ -0.68
SMAD1-209ENST00000511125 WDR43Q15061 677 aaKnown RBP eCLIP10.81□□□□□ -0.68
SMAD1-209ENST00000511125 POLKQ9UBT6 870 aa10.81□□□□□ -0.68
SMAD1-209ENST00000511125 NWD1Q149M9 1564 aa10.81□□□□□ -0.68
SMAD1-209ENST00000511125 HMOX1P09601 288 aa10.8□□□□□ -0.68
SMAD1-209ENST00000511125 HSP90AB2PQ58FF8 381 aa10.8□□□□□ -0.68
SMAD1-209ENST00000511125 EDC4Q6P2E9 1401 aaKnown RBP10.8□□□□□ -0.68
SMAD1-209ENST00000511125 U2AF1L5P0DN76 240 aaPredicted RBP10.8□□□□□ -0.68
SMAD1-209ENST00000511125 U2AF1Q01081 240 aaKnown RBP eCLIP10.8□□□□□ -0.68
SMAD1-209ENST00000511125 NPHP3Q7Z494 1330 aa10.79□□□□□ -0.68
SMAD1-209ENST00000511125 TOM1O60784 492 aa10.79□□□□□ -0.68
SMAD1-209ENST00000511125 PNISRQ8TF01 805 aaKnown RBP10.79□□□□□ -0.68
SMAD1-209ENST00000511125 RRP7AQ9Y3A4 280 aaKnown RBP10.79□□□□□ -0.68
SMAD1-209ENST00000511125 CERKQ8TCT0 537 aa10.79□□□□□ -0.68
SMAD1-209ENST00000511125 CDC42BPGQ6DT37 1551 aa10.78□□□□□ -0.68
SMAD1-209ENST00000511125 ANKARQ7Z5J8 1434 aa10.78□□□□□ -0.68
SMAD1-209ENST00000511125 POLR3AO14802 1390 aaPredicted RBP10.78□□□□□ -0.68
SMAD1-209ENST00000511125 FMN2Q9NZ56 1722 aa10.78□□□□□ -0.68
SMAD1-209ENST00000511125 ADGRB2O60241 1585 aa10.78□□□□□ -0.68
SMAD1-209ENST00000511125 ADAMTS2O95450 1211 aa10.78□□□□□ -0.68
SMAD1-209ENST00000511125 GCP02774 474 aa10.78□□□□□ -0.68
SMAD1-209ENST00000511125 USHBP1Q8N6Y0 703 aa10.78□□□□□ -0.68
SMAD1-209ENST00000511125 XIRP1Q702N8 1843 aaKnown RBP10.78□□□□□ -0.68
SMAD1-209ENST00000511125 MAP3K19Q56UN5 1328 aa10.77□□□□□ -0.69
SMAD1-209ENST00000511125 CFAP53Q96M91 514 aa10.77□□□□□ -0.69
SMAD1-209ENST00000511125 USP35Q9P2H5 1018 aa10.76□□□□□ -0.69
SMAD1-209ENST00000511125 TTC21AQ8NDW8 1320 aa10.76□□□□□ -0.69
SMAD1-209ENST00000511125 LTBP4Q8N2S1 1624 aa10.76□□□□□ -0.69
SMAD1-209ENST00000511125 DIAPH1O60610 1272 aaKnown RBP10.75□□□□□ -0.69
SMAD1-209ENST00000511125 LRRC59Q96AG4 307 aaKnown RBP10.75□□□□□ -0.69
SMAD1-209ENST00000511125 ITSN1Q15811 1721 aa10.74□□□□□ -0.69
SMAD1-209ENST00000511125 AEBP1Q8IUX7 1158 aa10.74□□□□□ -0.69
SMAD1-209ENST00000511125 STRN4Q9NRL3 753 aa10.74□□□□□ -0.69
SMAD1-209ENST00000511125 AXIN2Q9Y2T1 843 aa10.74□□□□□ -0.69
SMAD1-209ENST00000511125 BRD4O60885 1362 aaPredicted RBP10.74□□□□□ -0.69
SMAD1-209ENST00000511125 SPATA31A3Q5VYP0 1347 aa10.73□□□□□ -0.69
SMAD1-209ENST00000511125 APAF1O14727 1248 aa10.73□□□□□ -0.69
SMAD1-209ENST00000511125 CSB-PGBD3P0DP91 1061 aa10.73□□□□□ -0.69
SMAD1-209ENST00000511125 SSH2Q76I76 1423 aa10.73□□□□□ -0.69
SMAD1-209ENST00000511125 EIF4A2Q14240 407 aaKnown RBP10.72□□□□□ -0.69
SMAD1-209ENST00000511125 PRDM11Q9NQV5 511 aa10.72□□□□□ -0.69
SMAD1-209ENST00000511125 NPC1L1Q9UHC9 1359 aa10.72□□□□□ -0.69
SMAD1-209ENST00000511125 NCOA3Q9Y6Q9 1424 aa10.72□□□□□ -0.69
SMAD1-209ENST00000511125 SULT6B1Q6IMI4 303 aa10.72□□□□□ -0.69
SMAD1-209ENST00000511125 TOPAZ1Q8N9V7 1692 aa10.72□□□□□ -0.69
SMAD1-209ENST00000511125 DCCP43146 1447 aa10.71□□□□□ -0.69
SMAD1-209ENST00000511125 NSD2O96028 1365 aa10.71□□□□□ -0.69
SMAD1-209ENST00000511125 HOXC9P31274 260 aa10.71□□□□□ -0.69
SMAD1-209ENST00000511125 NUDCQ9Y266 331 aa10.71□□□□□ -0.69
SMAD1-209ENST00000511125 HSPA1LP34931 641 aa10.71□□□□□ -0.7
SMAD1-209ENST00000511125 SOS2Q07890 1332 aaPredicted RBP10.7□□□□□ -0.7
SMAD1-209ENST00000511125 PRKAR2BP31323 418 aa10.7□□□□□ -0.7
SMAD1-209ENST00000511125 NLRP2Q9NX02 1062 aa10.7□□□□□ -0.7
SMAD1-209ENST00000511125 OVOS2A0A0J9YW53 1432 aa10.7□□□□□ -0.7
SMAD1-209ENST00000511125 OVOS2Q6IE36 1432 aa10.7□□□□□ -0.7
SMAD1-209ENST00000511125 AKAP12Q02952 1782 aa10.7□□□□□ -0.7
SMAD1-209ENST00000511125 KIAA0232Q92628 1395 aa10.7□□□□□ -0.7
SMAD1-209ENST00000511125 KCNH5Q8NCM2 988 aa10.69□□□□□ -0.7
SMAD1-209ENST00000511125 MON2Q7Z3U7 1717 aa10.69□□□□□ -0.7
SMAD1-209ENST00000511125 MAP2P11137 1827 aaKnown RBP10.69□□□□□ -0.7
SMAD1-209ENST00000511125 PHACTR3Q96KR7 559 aa10.69□□□□□ -0.7
SMAD1-209ENST00000511125 PIK3C2AO00443 1686 aa10.69□□□□□ -0.7
SMAD1-209ENST00000511125 IL13P35225 146 aa10.68□□□□□ -0.7
SMAD1-209ENST00000511125 FAM83GA6ND36 823 aa10.68□□□□□ -0.7
SMAD1-209ENST00000511125 EVA1CP58658 441 aa10.68□□□□□ -0.7
SMAD1-209ENST00000511125 ARHGEF25Q86VW2 580 aa10.68□□□□□ -0.7
SMAD1-209ENST00000511125 ANKRD24Q8TF21 1146 aa10.68□□□□□ -0.7
SMAD1-209ENST00000511125 CDCA7LQ96GN5 454 aa10.68□□□□□ -0.7
SMAD1-209ENST00000511125 EYA1Q99502 592 aa10.68□□□□□ -0.7
SMAD1-209ENST00000511125 TNS3Q68CZ2 1445 aa10.68□□□□□ -0.7
SMAD1-209ENST00000511125 KIF20BQ96Q89 1820 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms