RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 NOB1Q9ULX3 412 aaKnown RBP12.66□□□□□ -0.38
NEK1-206ENST00000510533 TTLL5Q6EMB2 1281 aa12.66□□□□□ -0.38
NEK1-206ENST00000510533 RBM33Q96EV2 1170 aaKnown RBP12.66□□□□□ -0.38
NEK1-206ENST00000510533 GAPVD1Q14C86 1478 aa12.66□□□□□ -0.38
NEK1-206ENST00000510533 NCOA2Q15596 1464 aa12.66□□□□□ -0.38
NEK1-206ENST00000510533 GNAI2P04899 355 aa12.66□□□□□ -0.38
NEK1-206ENST00000510533 DNAJC2Q99543 621 aaKnown RBP12.66□□□□□ -0.38
NEK1-206ENST00000510533 TBC1D2BQ9UPU7 963 aa12.66□□□□□ -0.38
NEK1-206ENST00000510533 FILIP1LQ4L180 1135 aa12.65□□□□□ -0.38
NEK1-206ENST00000510533 ERC1Q8IUD2 1116 aa12.65□□□□□ -0.38
NEK1-206ENST00000510533 NLRP2Q9NX02 1062 aa12.65□□□□□ -0.38
NEK1-206ENST00000510533 RRBP1Q9P2E9 1410 aaKnown RBP12.65□□□□□ -0.38
NEK1-206ENST00000510533 ODF2Q5BJF6 829 aa12.65□□□□□ -0.38
NEK1-206ENST00000510533 SMARCE1Q969G3 411 aa12.65□□□□□ -0.38
NEK1-206ENST00000510533 FMNL2Q96PY5 1086 aa12.65□□□□□ -0.38
NEK1-206ENST00000510533 CCDC66A2RUB6 948 aa12.65□□□□□ -0.38
NEK1-206ENST00000510533 BCAR3O75815 825 aa12.65□□□□□ -0.38
NEK1-206ENST00000510533 AKNAQ7Z591 1439 aa12.65□□□□□ -0.38
NEK1-206ENST00000510533 NLRP6P59044 892 aa12.65□□□□□ -0.39
NEK1-206ENST00000510533 SCAPERQ9BY12 1400 aa12.65□□□□□ -0.39
NEK1-206ENST00000510533 FGD5Q6ZNL6 1462 aa12.65□□□□□ -0.39
NEK1-206ENST00000510533 KDM4AO75164 1064 aa12.64□□□□□ -0.39
NEK1-206ENST00000510533 STK38Q15208 465 aa12.64□□□□□ -0.39
NEK1-206ENST00000510533 DCTN1Q14203 1278 aa12.64□□□□□ -0.39
NEK1-206ENST00000510533 CFAP70Q5T0N1 1121 aa12.64□□□□□ -0.39
NEK1-206ENST00000510533 K7ELQ4 463 aaPredicted RBP12.64□□□□□ -0.39
NEK1-206ENST00000510533 ATP2B1P20020 1258 aa12.63□□□□□ -0.39
NEK1-206ENST00000510533 NUTM2GQ5VZR2 741 aa12.63□□□□□ -0.39
NEK1-206ENST00000510533 CCDC192P0DO97 292 aa12.63□□□□□ -0.39
NEK1-206ENST00000510533 AEBP1Q8IUX7 1158 aa12.63□□□□□ -0.39
NEK1-206ENST00000510533 H0YHG0 523 aa12.63□□□□□ -0.39
NEK1-206ENST00000510533 SPC24Q8NBT2 197 aa12.63□□□□□ -0.39
NEK1-206ENST00000510533 CASKIN1Q8WXD9 1431 aa12.63□□□□□ -0.39
NEK1-206ENST00000510533 TSR2Q969E8 191 aaKnown RBP12.63□□□□□ -0.39
NEK1-206ENST00000510533 WDR33Q9C0J8 1336 aaKnown RBP12.63□□□□□ -0.39
NEK1-206ENST00000510533 HSP90AB2PQ58FF8 381 aa12.62□□□□□ -0.39
NEK1-206ENST00000510533 CYP46A1Q9Y6A2 500 aa12.62□□□□□ -0.39
NEK1-206ENST00000510533 CT47B1P0C2W7 299 aaPredicted RBP12.62□□□□□ -0.39
NEK1-206ENST00000510533 DHX8Q14562 1220 aaKnown RBP12.62□□□□□ -0.39
NEK1-206ENST00000510533 PIP4K2AP48426 406 aaPredicted RBP12.62□□□□□ -0.39
NEK1-206ENST00000510533 GRPEL1Q9HAV7 217 aa12.62□□□□□ -0.39
NEK1-206ENST00000510533 MYO6Q9UM54 1294 aa12.62□□□□□ -0.39
NEK1-206ENST00000510533 CEBPZQ03701 1054 aaKnown RBP12.62□□□□□ -0.39
NEK1-206ENST00000510533 IL27Q8NEV9 243 aa12.62□□□□□ -0.39
NEK1-206ENST00000510533 MAGEC2Q9UBF1 373 aaPredicted RBP12.62□□□□□ -0.39
NEK1-206ENST00000510533 TXLNAP40222 546 aa12.61□□□□□ -0.39
NEK1-206ENST00000510533 JMYQ8N9B5 988 aa12.61□□□□□ -0.39
NEK1-206ENST00000510533 RBM10P98175 930 aaKnown RBP12.61□□□□□ -0.39
NEK1-206ENST00000510533 ANKRD1Q15327 319 aa12.61□□□□□ -0.39
NEK1-206ENST00000510533 MTMR7Q9Y216 660 aa12.61□□□□□ -0.39
NEK1-206ENST00000510533 SMG6Q86US8 1419 aaKnown RBP12.61□□□□□ -0.39
NEK1-206ENST00000510533 CCT4P50991 539 aaKnown RBP12.61□□□□□ -0.39
NEK1-206ENST00000510533 SAMD1Q6SPF0 538 aaPredicted RBP12.61□□□□□ -0.39
NEK1-206ENST00000510533 WDR63Q8IWG1 891 aa12.61□□□□□ -0.39
NEK1-206ENST00000510533 PNISRQ8TF01 805 aaKnown RBP12.61□□□□□ -0.39
NEK1-206ENST00000510533 SLC4A2P04920 1241 aa12.61□□□□□ -0.39
NEK1-206ENST00000510533 LRRCC1Q9C099 1032 aa12.61□□□□□ -0.39
NEK1-206ENST00000510533 PLEKHO1Q53GL0 409 aaPredicted RBP12.6□□□□□ -0.39
NEK1-206ENST00000510533 ZFYVE27Q5T4F4 411 aa12.6□□□□□ -0.39
NEK1-206ENST00000510533 TNMDQ9H2S6 317 aa12.6□□□□□ -0.39
NEK1-206ENST00000510533 BRPF1P55201 1214 aaPredicted RBP12.6□□□□□ -0.39
NEK1-206ENST00000510533 MVPQ14764 893 aaKnown RBP12.6□□□□□ -0.39
NEK1-206ENST00000510533 ATF7IPQ6VMQ6 1270 aa12.6□□□□□ -0.39
NEK1-206ENST00000510533 CCDC191Q8NCU4 936 aa12.6□□□□□ -0.39
NEK1-206ENST00000510533 SERPINC1P01008 464 aa12.6□□□□□ -0.39
NEK1-206ENST00000510533 KRT85P78386 507 aa12.59□□□□□ -0.39
NEK1-206ENST00000510533 NBPF1Q3BBV0 1214 aa12.59□□□□□ -0.39
NEK1-206ENST00000510533 FBXO3Q9UK99 471 aa12.59□□□□□ -0.39
NEK1-206ENST00000510533 LEKR1Q6ZMV7 388 aa12.59□□□□□ -0.39
NEK1-206ENST00000510533 RAD54L2Q9Y4B4 1467 aa12.59□□□□□ -0.39
NEK1-206ENST00000510533 ATF3P18847 181 aa12.59□□□□□ -0.39
NEK1-206ENST00000510533 CYB5RLQ6IPT4 315 aa12.59□□□□□ -0.39
NEK1-206ENST00000510533 CDK5RAP3Q96JB5 506 aa12.59□□□□□ -0.39
NEK1-206ENST00000510533 CIZ1Q9ULV3 898 aaPredicted RBP12.59□□□□□ -0.39
NEK1-206ENST00000510533 HFM1A2PYH4 1435 aa12.59□□□□□ -0.39
NEK1-206ENST00000510533 PRDM2Q13029 1718 aa12.59□□□□□ -0.39
NEK1-206ENST00000510533 CHD1LQ86WJ1 897 aa12.58□□□□□ -0.39
NEK1-206ENST00000510533 CCDC112Q8NEF3 446 aa12.58□□□□□ -0.39
NEK1-206ENST00000510533 SLC3A2P08195 630 aaKnown RBP12.58□□□□□ -0.4
NEK1-206ENST00000510533 RDXP35241 583 aaKnown RBP12.58□□□□□ -0.4
NEK1-206ENST00000510533 CCDC158Q5M9N0 1113 aa12.58□□□□□ -0.4
NEK1-206ENST00000510533 HDGFL1Q5TGJ6 251 aa12.58□□□□□ -0.4
NEK1-206ENST00000510533 CALRP27797 417 aaKnown RBP12.58□□□□□ -0.4
NEK1-206ENST00000510533 AXDND1Q5T1B0 1012 aaPredicted RBP12.58□□□□□ -0.4
NEK1-206ENST00000510533 ZNHIT6Q9NWK9 470 aaKnown RBP12.58□□□□□ -0.4
NEK1-206ENST00000510533 STK3Q13188 491 aa12.57□□□□□ -0.4
NEK1-206ENST00000510533 TTC39AQ5SRH9 613 aa12.57□□□□□ -0.4
NEK1-206ENST00000510533 ABTB2Q8N961 1025 aa12.57□□□□□ -0.4
NEK1-206ENST00000510533 ME1P48163 572 aa12.57□□□□□ -0.4
NEK1-206ENST00000510533 DACH1Q9UI36 760 aa12.57□□□□□ -0.4
NEK1-206ENST00000510533 LARP1BQ659C4 914 aaKnown RBP12.57□□□□□ -0.4
NEK1-206ENST00000510533 MCM4P33991 863 aa12.57□□□□□ -0.4
NEK1-206ENST00000510533 KIF6Q6ZMV9 814 aa12.57□□□□□ -0.4
NEK1-206ENST00000510533 SRCIN1Q9C0H9 1055 aa12.57□□□□□ -0.4
NEK1-206ENST00000510533 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.57□□□□□ -0.42e-6■■■■■ 52.4
NEK1-206ENST00000510533 PPFIBP1Q86W92 1011 aa12.57□□□□□ -0.4
NEK1-206ENST00000510533 CCAR1Q8IX12 1150 aaKnown RBP12.57□□□□□ -0.4
NEK1-206ENST00000510533 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.57□□□□□ -0.43e-6■■□□□ 12.4
NEK1-206ENST00000510533 SLC12A5Q9H2X9 1139 aa12.57□□□□□ -0.4
NEK1-206ENST00000510533 GPRASP1Q5JY77 1395 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms