RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 CCNYL3P0C7X3 344 aa9.31□□□□□ -0.92
NFKB1-208ENST00000509165 PTCRAQ6ISU1 281 aaPredicted RBP9.31□□□□□ -0.92
NFKB1-208ENST00000509165 PCMTD1Q96MG8 357 aaPredicted RBP9.31□□□□□ -0.92
NFKB1-208ENST00000509165 EVA1BQ9NVM1 165 aa9.31□□□□□ -0.92
NFKB1-208ENST00000509165 CCDC24Q8N4L8 307 aa9.3□□□□□ -0.92
NFKB1-208ENST00000509165 C11orf95C9JLR9 678 aaPredicted RBP9.29□□□□□ -0.92
NFKB1-208ENST00000509165 F12P00748 615 aaPredicted RBP9.29□□□□□ -0.92
NFKB1-208ENST00000509165 RFC5P40937 340 aa9.27□□□□□ -0.93
NFKB1-208ENST00000509165 CTDSPL2Q05D32 466 aa9.27□□□□□ -0.93
NFKB1-208ENST00000509165 KCNH2Q12809 1159 aa9.27□□□□□ -0.93
NFKB1-208ENST00000509165 TRIM32Q13049 653 aa9.27□□□□□ -0.93
NFKB1-208ENST00000509165 LCE2CQ5TA81 110 aa9.27□□□□□ -0.93
NFKB1-208ENST00000509165 ZBTB24O43167 697 aaPredicted RBP9.26□□□□□ -0.93
NFKB1-208ENST00000509165 HELBQ8NG08 1087 aaPredicted RBP9.26□□□□□ -0.93
NFKB1-208ENST00000509165 TSC1Q92574 1164 aa9.26□□□□□ -0.93
NFKB1-208ENST00000509165 CD2BP2O95400 341 aaKnown RBP9.25□□□□□ -0.93
NFKB1-208ENST00000509165 FOXC1Q12948 553 aa9.25□□□□□ -0.93
NFKB1-208ENST00000509165 MAP10Q9P2G4 905 aa9.25□□□□□ -0.93
NFKB1-208ENST00000509165 CRIPAKQ8N1N5 446 aa9.24□□□□□ -0.93
NFKB1-208ENST00000509165 UNC93B1Q9H1C4 597 aa9.24□□□□□ -0.93
NFKB1-208ENST00000509165 PKD2L1Q9P0L9 805 aa9.24□□□□□ -0.93
NFKB1-208ENST00000509165 ATP1B4Q9UN42 357 aaPredicted RBP9.24□□□□□ -0.93
NFKB1-208ENST00000509165 SKOR1P84550 965 aa9.23□□□□□ -0.93
NFKB1-208ENST00000509165 AXIN1O15169 862 aa9.22□□□□□ -0.93
NFKB1-208ENST00000509165 LRRN4Q8WUT4 740 aa9.22□□□□□ -0.93
NFKB1-208ENST00000509165 AP1G2O75843 785 aa9.21□□□□□ -0.94
NFKB1-208ENST00000509165 USP17L8P0C7I0 530 aa9.2□□□□□ -0.94
NFKB1-208ENST00000509165 CTHP32929 405 aa9.2□□□□□ -0.94
NFKB1-208ENST00000509165 WNT7BP56706 349 aa9.2□□□□□ -0.94
NFKB1-208ENST00000509165 WNT7AO00755 349 aa9.19□□□□□ -0.94
NFKB1-208ENST00000509165 AVPP01185 164 aa9.19□□□□□ -0.94
NFKB1-208ENST00000509165 SH3BP2P78314 561 aa9.19□□□□□ -0.94
NFKB1-208ENST00000509165 TMEM259Q4ZIN3 620 aa9.19□□□□□ -0.94
NFKB1-208ENST00000509165 BAP1Q92560 729 aa9.19□□□□□ -0.94
NFKB1-208ENST00000509165 HMX1Q9NP08 348 aaPredicted RBP9.18□□□□□ -0.94
NFKB1-208ENST00000509165 LINC01559Q495D7 138 aa9.17□□□□□ -0.94
NFKB1-208ENST00000509165 RC3H1Q5TC82 1133 aaKnown RBP9.17□□□□□ -0.94
NFKB1-208ENST00000509165 TERTO14746 1132 aaKnown RBP9.16□□□□□ -0.94
NFKB1-208ENST00000509165 ZNF511Q8NB15 262 aa9.16□□□□□ -0.94
NFKB1-208ENST00000509165 NR6A1Q15406 480 aa9.15□□□□□ -0.94
NFKB1-208ENST00000509165 EPS8L1Q8TE68 723 aa9.15□□□□□ -0.94
NFKB1-208ENST00000509165 MRGPRX2Q96LB1 330 aa9.15□□□□□ -0.94
NFKB1-208ENST00000509165 TOR4AQ9NXH8 423 aa9.15□□□□□ -0.94
NFKB1-208ENST00000509165 SNRPBP14678 240 aaKnown RBP9.14□□□□□ -0.95
NFKB1-208ENST00000509165 SUZ12Q15022 739 aaKnown RBP9.14□□□□□ -0.95
NFKB1-208ENST00000509165 BANK1Q8NDB2 785 aa9.14□□□□□ -0.95
NFKB1-208ENST00000509165 TRIM34Q9BYJ4 488 aa9.14□□□□□ -0.95
NFKB1-208ENST00000509165 SIAH2O43255 324 aa9.13□□□□□ -0.95
NFKB1-208ENST00000509165 TMEM132AQ24JP5 1023 aa9.13□□□□□ -0.95
NFKB1-208ENST00000509165 CTC1Q2NKJ3 1217 aa9.13□□□□□ -0.95
NFKB1-208ENST00000509165 C4orf48Q5BLP8 95 aa9.12□□□□□ -0.95
NFKB1-208ENST00000509165 ARMC2Q8NEN0 867 aa9.12□□□□□ -0.95
NFKB1-208ENST00000509165 FOXJ1Q92949 421 aa9.12□□□□□ -0.95
NFKB1-208ENST00000509165 GJD4Q96KN9 370 aaPredicted RBP9.12□□□□□ -0.95
NFKB1-208ENST00000509165 SH3RF1Q7Z6J0 888 aa9.11□□□□□ -0.95
NFKB1-208ENST00000509165 CYP4X1Q8N118 509 aa9.11□□□□□ -0.95
NFKB1-208ENST00000509165 FAM181BA6NEQ2 426 aa9.1□□□□□ -0.95
NFKB1-208ENST00000509165 SOCS7O14512 581 aa9.1□□□□□ -0.95
NFKB1-208ENST00000509165 SMCPP49901 116 aaPredicted RBP9.1□□□□□ -0.95
NFKB1-208ENST00000509165 SH3BP5LQ7L8J4 393 aa9.1□□□□□ -0.95
NFKB1-208ENST00000509165 MTMR14Q8NCE2 650 aa9.1□□□□□ -0.95
NFKB1-208ENST00000509165 GPKOWQ92917 476 aaPredicted RBP eCLIP9.1□□□□□ -0.95
NFKB1-208ENST00000509165 SNRKQ9NRH2 765 aa9.1□□□□□ -0.95
NFKB1-208ENST00000509165 FKBPLQ9UIM3 349 aa9.1□□□□□ -0.95
NFKB1-208ENST00000509165 VARSP26640 1264 aaKnown RBP9.09□□□□□ -0.95
NFKB1-208ENST00000509165 NBPF14Q5TI25 921 aa9.09□□□□□ -0.95
NFKB1-208ENST00000509165 EHBP1Q8NDI1 1231 aa9.09□□□□□ -0.95
NFKB1-208ENST00000509165 SNIP1Q8TAD8 396 aaKnown RBP9.09□□□□□ -0.95
NFKB1-208ENST00000509165 PDXDC2PQ6P474 469 aa9.08□□□□□ -0.96
NFKB1-208ENST00000509165 ZC3H4Q9UPT8 1303 aaKnown RBP9.07□□□□□ -0.96
NFKB1-208ENST00000509165 J3QL48 77 aa9.07□□□□□ -0.96
NFKB1-208ENST00000509165 GPR37L1O60883 481 aa9.07□□□□□ -0.96
NFKB1-208ENST00000509165 SMPD1P17405 629 aa9.07□□□□□ -0.96
NFKB1-208ENST00000509165 BPHLQ86WA6 291 aaPredicted RBP9.07□□□□□ -0.96
NFKB1-208ENST00000509165 OCSTAMPQ9BR26 566 aa9.07□□□□□ -0.96
NFKB1-208ENST00000509165 C1QTNF2Q9BXJ5 285 aa9.07□□□□□ -0.96
NFKB1-208ENST00000509165 ATP13A2Q9NQ11 1180 aa9.07□□□□□ -0.96
NFKB1-208ENST00000509165 MPNDQ8N594 471 aa9.06□□□□□ -0.96
NFKB1-208ENST00000509165 TTC24A2A3L6 582 aaPredicted RBP9.05□□□□□ -0.96
NFKB1-208ENST00000509165 LORP23490 312 aaPredicted RBP9.05□□□□□ -0.96
NFKB1-208ENST00000509165 ZSCAN1Q8NBB4 408 aa9.04□□□□□ -0.96
NFKB1-208ENST00000509165 TLL2Q9Y6L7 1015 aa9.04□□□□□ -0.96
NFKB1-208ENST00000509165 AGERQ15109 404 aa9.03□□□□□ -0.96
NFKB1-208ENST00000509165 FAM174AQ8TBP5 190 aa9.03□□□□□ -0.96
NFKB1-208ENST00000509165 TRIM47Q96LD4 638 aa9.03□□□□□ -0.96
NFKB1-208ENST00000509165 CDK15Q96Q40 435 aa9.03□□□□□ -0.96
NFKB1-208ENST00000509165 GPSM3Q9Y4H4 160 aa9.03□□□□□ -0.96
NFKB1-208ENST00000509165 ALDH1A1P00352 501 aa9.02□□□□□ -0.97
NFKB1-208ENST00000509165 TRMT44Q8IYL2 757 aaKnown RBP9.02□□□□□ -0.97
NFKB1-208ENST00000509165 GMPRP36959 345 aa9.01□□□□□ -0.97
NFKB1-208ENST00000509165 MCM6Q14566 821 aa9.01□□□□□ -0.97
NFKB1-208ENST00000509165 ERFEQ4G0M1 354 aa9.01□□□□□ -0.97
NFKB1-208ENST00000509165 ARHGAP9Q9BRR9 750 aa9.01□□□□□ -0.97
NFKB1-208ENST00000509165 MAGEB6P1A0A0J9YX57 407 aa9□□□□□ -0.97
NFKB1-208ENST00000509165 PTK2Q05397 1052 aa9□□□□□ -0.97
NFKB1-208ENST00000509165 PNMA1Q8ND90 353 aa9□□□□□ -0.97
NFKB1-208ENST00000509165 HPS1Q92902 700 aa9□□□□□ -0.97
NFKB1-208ENST00000509165 SENP2Q9HC62 589 aa9□□□□□ -0.97
NFKB1-208ENST00000509165 CARD14Q9BXL6 1004 aa8.99□□□□□ -0.97
NFKB1-208ENST00000509165 MAP4K5Q9Y4K4 846 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms