RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 SLIT2O94813 1529 aa21.21■□□□□ 0.99
UBE2D3-228ENST00000508974 NBPF8Q3BBV2 869 aa21.21■□□□□ 0.99
UBE2D3-228ENST00000508974 CABP2Q9NPB3 220 aa21.21■□□□□ 0.99
UBE2D3-228ENST00000508974 TONSLQ96HA7 1378 aa21.21■□□□□ 0.99
UBE2D3-228ENST00000508974 MAPK8IP2Q13387 824 aaPredicted RBP21.2■□□□□ 0.98
UBE2D3-228ENST00000508974 NWD2Q9ULI1 1742 aa21.19■□□□□ 0.98
UBE2D3-228ENST00000508974 ACEP12821 1306 aa21.19■□□□□ 0.98
UBE2D3-228ENST00000508974 PPIP5K1Q6PFW1 1433 aa21.19■□□□□ 0.98
UBE2D3-228ENST00000508974 UNC5CLQ8IV45 518 aa21.18■□□□□ 0.98
UBE2D3-228ENST00000508974 UPF1Q92900 1129 aaKnown RBP eCLIP21.18■□□□□ 0.98
UBE2D3-228ENST00000508974 CCDC61Q9Y6R9 512 aa21.18■□□□□ 0.98
UBE2D3-228ENST00000508974 GLI3P10071 1580 aa21.18■□□□□ 0.98
UBE2D3-228ENST00000508974 PHRF1Q9P1Y6 1649 aaKnown RBP21.18■□□□□ 0.98
UBE2D3-228ENST00000508974 NUTM2GQ5VZR2 741 aa21.17■□□□□ 0.98
UBE2D3-228ENST00000508974 POLR3AO14802 1390 aaPredicted RBP21.16■□□□□ 0.98
UBE2D3-228ENST00000508974 RALGAPBQ86X10 1494 aa21.15■□□□□ 0.98
UBE2D3-228ENST00000508974 GJD4Q96KN9 370 aaPredicted RBP21.15■□□□□ 0.98
UBE2D3-228ENST00000508974 COL14A1Q05707 1796 aaKnown RBP21.15■□□□□ 0.98
UBE2D3-228ENST00000508974 NRAPQ86VF7 1730 aa21.15■□□□□ 0.98
UBE2D3-228ENST00000508974 FAM83GA6ND36 823 aa21.14■□□□□ 0.97
UBE2D3-228ENST00000508974 CCDC9Q9Y3X0 531 aaKnown RBP21.14■□□□□ 0.97
UBE2D3-228ENST00000508974 PLEKHG3A1L390 1219 aa21.13■□□□□ 0.97
UBE2D3-228ENST00000508974 BRWD3Q6RI45 1802 aa21.12■□□□□ 0.97
UBE2D3-228ENST00000508974 EVC2Q86UK5 1308 aa21.11■□□□□ 0.97
UBE2D3-228ENST00000508974 CARD11Q9BXL7 1154 aa21.11■□□□□ 0.97
UBE2D3-228ENST00000508974 BTG4Q9NY30 223 aa21.1■□□□□ 0.97
UBE2D3-228ENST00000508974 CABP1Q9NZU7 370 aa21.1■□□□□ 0.97
UBE2D3-228ENST00000508974 ATAD2Q6PL18 1390 aa21.09■□□□□ 0.97
UBE2D3-228ENST00000508974 ABTB2Q8N961 1025 aa21.08■□□□□ 0.97
UBE2D3-228ENST00000508974 PRDM11Q9NQV5 511 aa21.08■□□□□ 0.97
UBE2D3-228ENST00000508974 NRKQ7Z2Y5 1582 aa21.07■□□□□ 0.96
UBE2D3-228ENST00000508974 ZC3H6P61129 1189 aaKnown RBP21.07■□□□□ 0.96
UBE2D3-228ENST00000508974 VPS72Q15906 364 aa21.07■□□□□ 0.96
UBE2D3-228ENST00000508974 KIAA0232Q92628 1395 aa21.07■□□□□ 0.96
UBE2D3-228ENST00000508974 AKAP12Q02952 1782 aa21.06■□□□□ 0.96
UBE2D3-228ENST00000508974 CHRNA2Q15822 529 aa21.06■□□□□ 0.96
UBE2D3-228ENST00000508974 EP400Q96L91 3159 aa21.05■□□□□ 0.96
UBE2D3-228ENST00000508974 USP6P35125 1406 aa21.04■□□□□ 0.96
UBE2D3-228ENST00000508974 A0A0G2JS52 829 aa21.04■□□□□ 0.96
UBE2D3-228ENST00000508974 MYT1Q01538 1121 aa21.04■□□□□ 0.96
UBE2D3-228ENST00000508974 PPP4R3CPQ6ZMV5 832 aa21.03■□□□□ 0.96
UBE2D3-228ENST00000508974 PCGF6Q9BYE7 350 aa21.03■□□□□ 0.96
UBE2D3-228ENST00000508974 PIK3C2AO00443 1686 aa21.02■□□□□ 0.96
UBE2D3-228ENST00000508974 SEPT12Q8IYM1 358 aa21.02■□□□□ 0.96
UBE2D3-228ENST00000508974 ZBTB7CA1YPR0 619 aa21■□□□□ 0.95
UBE2D3-228ENST00000508974 FAM98CQ17RN3 349 aaKnown RBP21■□□□□ 0.95
UBE2D3-228ENST00000508974 STRN4Q9NRL3 753 aa21■□□□□ 0.95
UBE2D3-228ENST00000508974 NLRP13Q86W25 1043 aa20.99■□□□□ 0.95
UBE2D3-228ENST00000508974 USP19O94966 1318 aa20.99■□□□□ 0.95
UBE2D3-228ENST00000508974 MON2Q7Z3U7 1717 aa20.98■□□□□ 0.95
UBE2D3-228ENST00000508974 SBNO2Q9Y2G9 1366 aa20.97■□□□□ 0.95
UBE2D3-228ENST00000508974 NLRP6P59044 892 aa20.97■□□□□ 0.95
UBE2D3-228ENST00000508974 BRD4O60885 1362 aaPredicted RBP20.97■□□□□ 0.95
UBE2D3-228ENST00000508974 LMO7Q8WWI1 1683 aa20.96■□□□□ 0.95
UBE2D3-228ENST00000508974 SPATA31A5Q5VU36 1347 aa20.96■□□□□ 0.95
UBE2D3-228ENST00000508974 SPATA31A7Q8IWB4 1347 aa20.96■□□□□ 0.95
UBE2D3-228ENST00000508974 SSH2Q76I76 1423 aa20.95■□□□□ 0.95
UBE2D3-228ENST00000508974 GCP02774 474 aa20.95■□□□□ 0.94
UBE2D3-228ENST00000508974 CAMTA1Q9Y6Y1 1673 aa20.95■□□□□ 0.94
UBE2D3-228ENST00000508974 KTN1Q86UP2 1357 aaKnown RBP20.95■□□□□ 0.94
UBE2D3-228ENST00000508974 SLIT3O75094 1523 aa20.94■□□□□ 0.94
UBE2D3-228ENST00000508974 TMC1Q8TDI8 760 aa20.94■□□□□ 0.94
UBE2D3-228ENST00000508974 USP35Q9P2H5 1018 aa20.94■□□□□ 0.94
UBE2D3-228ENST00000508974 THSD7AQ9UPZ6 1657 aa20.93■□□□□ 0.94
UBE2D3-228ENST00000508974 SOX12O15370 315 aa20.93■□□□□ 0.94
UBE2D3-228ENST00000508974 ONECUT3O60422 494 aaPredicted RBP20.93■□□□□ 0.94
UBE2D3-228ENST00000508974 EVA1CP58658 441 aa20.93■□□□□ 0.94
UBE2D3-228ENST00000508974 KRT27Q7Z3Y8 459 aa20.93■□□□□ 0.94
UBE2D3-228ENST00000508974 TTC21BQ7Z4L5 1316 aa20.93■□□□□ 0.94
UBE2D3-228ENST00000508974 CPSF1Q10570 1443 aaKnown RBP20.93■□□□□ 0.94
UBE2D3-228ENST00000508974 ST20-MTHFSA0A0A6YYL1 179 aa20.92■□□□□ 0.94
UBE2D3-228ENST00000508974 ZNF692Q9BU19 519 aaPredicted RBP20.92■□□□□ 0.94
UBE2D3-228ENST00000508974 CPDO75976 1380 aa20.92■□□□□ 0.94
UBE2D3-228ENST00000508974 SPATA31A1Q5TZJ5 1347 aa20.91■□□□□ 0.94
UBE2D3-228ENST00000508974 RGPD5Q99666 1765 aa20.9■□□□□ 0.94
UBE2D3-228ENST00000508974 CD163L1Q9NR16 1453 aa20.9■□□□□ 0.94
UBE2D3-228ENST00000508974 FAM182BQ5T319 152 aa20.9■□□□□ 0.94
UBE2D3-228ENST00000508974 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.9■□□□□ 0.94
UBE2D3-228ENST00000508974 LARP1Q6PKG0 1096 aaKnown RBP20.89■□□□□ 0.93
UBE2D3-228ENST00000508974 SLC12A5Q9H2X9 1139 aa20.88■□□□□ 0.93
UBE2D3-228ENST00000508974 COL5A2P05997 1499 aaPredicted RBP20.88■□□□□ 0.93
UBE2D3-228ENST00000508974 BLMP54132 1417 aaPredicted RBP20.87■□□□□ 0.93
UBE2D3-228ENST00000508974 TTC21AQ8NDW8 1320 aa20.87■□□□□ 0.93
UBE2D3-228ENST00000508974 TESK2Q96S53 571 aa20.87■□□□□ 0.93
UBE2D3-228ENST00000508974 ZRANB1Q9UGI0 708 aa20.87■□□□□ 0.93
UBE2D3-228ENST00000508974 COL18A1P39060 1754 aa20.87■□□□□ 0.93
UBE2D3-228ENST00000508974 USP47Q96K76 1375 aa20.86■□□□□ 0.93
UBE2D3-228ENST00000508974 HDGFL2Q7Z4V5 671 aaPredicted RBP20.86■□□□□ 0.93
UBE2D3-228ENST00000508974 CCDC125Q86Z20 511 aa20.85■□□□□ 0.93
UBE2D3-228ENST00000508974 A0A1W2PP64 1363 aa20.85■□□□□ 0.93
UBE2D3-228ENST00000508974 SF3B2Q13435 895 aaKnown RBP20.84■□□□□ 0.93
UBE2D3-228ENST00000508974 NME9Q86XW9 330 aa20.84■□□□□ 0.93
UBE2D3-228ENST00000508974 LTN1O94822 1766 aa20.83■□□□□ 0.93
UBE2D3-228ENST00000508974 DEFB132Q7Z7B7 95 aa20.83■□□□□ 0.93
UBE2D3-228ENST00000508974 AATKQ6ZMQ8 1374 aa20.83■□□□□ 0.92
UBE2D3-228ENST00000508974 NFAT5O94916 1531 aa20.83■□□□□ 0.92
UBE2D3-228ENST00000508974 USP54Q70EL1 1684 aa20.83■□□□□ 0.92
UBE2D3-228ENST00000508974 RGPD1P0DJD0 1748 aa20.82■□□□□ 0.92
UBE2D3-228ENST00000508974 KCNH5Q8NCM2 988 aa20.82■□□□□ 0.92
UBE2D3-228ENST00000508974 CCER1Q8TC90 406 aaPredicted RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms