RNA–Protein interactions for RNA: ENST00000508885.5

LINC00461-208, long intergenic non-protein coding RNA 461, humanhuman

TSL 4

Gene LINC00461, Length 558 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-208ENST00000508885 PRDM11Q9NQV5 511 aa12.16□□□□□ -0.46
LINC00461-208ENST00000508885 EP400Q96L91 3159 aa12.16□□□□□ -0.46
LINC00461-208ENST00000508885 EIF3AQ14152 1382 aaKnown RBP12.16□□□□□ -0.46
LINC00461-208ENST00000508885 DLC1Q96QB1 1528 aa12.16□□□□□ -0.46
LINC00461-208ENST00000508885 DCAF8L1A6NGE4 600 aa12.15□□□□□ -0.46
LINC00461-208ENST00000508885 EN1Q05925 392 aaPredicted RBP12.15□□□□□ -0.46
LINC00461-208ENST00000508885 SPATA31A5Q5VU36 1347 aa12.14□□□□□ -0.47
LINC00461-208ENST00000508885 SPATA31A7Q8IWB4 1347 aa12.14□□□□□ -0.47
LINC00461-208ENST00000508885 PLCH1Q4KWH8 1693 aa12.14□□□□□ -0.47
LINC00461-208ENST00000508885 CHRNA2Q15822 529 aa12.14□□□□□ -0.47
LINC00461-208ENST00000508885 NUTM2GQ5VZR2 741 aa12.14□□□□□ -0.47
LINC00461-208ENST00000508885 NWD2Q9ULI1 1742 aa12.14□□□□□ -0.47
LINC00461-208ENST00000508885 ZC3H6P61129 1189 aaKnown RBP12.13□□□□□ -0.47
LINC00461-208ENST00000508885 NUDT16Q96DE0 195 aaKnown RBP12.13□□□□□ -0.47
LINC00461-208ENST00000508885 STRN4Q9NRL3 753 aa12.13□□□□□ -0.47
LINC00461-208ENST00000508885 HRCP23327 699 aa12.12□□□□□ -0.47
LINC00461-208ENST00000508885 STAC3Q96MF2 364 aa12.12□□□□□ -0.47
LINC00461-208ENST00000508885 ADGRB1O14514 1584 aa12.12□□□□□ -0.47
LINC00461-208ENST00000508885 TULP4Q9NRJ4 1543 aa12.11□□□□□ -0.47
LINC00461-208ENST00000508885 ADGRB2O60241 1585 aa12.11□□□□□ -0.47
LINC00461-208ENST00000508885 EVA1CP58658 441 aa12.11□□□□□ -0.47
LINC00461-208ENST00000508885 CDK19Q9BWU1 502 aa12.11□□□□□ -0.47
LINC00461-208ENST00000508885 USP35Q9P2H5 1018 aa12.11□□□□□ -0.47
LINC00461-208ENST00000508885 ABCA3Q99758 1704 aa12.11□□□□□ -0.47
LINC00461-208ENST00000508885 KIAA0232Q92628 1395 aa12.1□□□□□ -0.47
LINC00461-208ENST00000508885 TRIM37O94972 964 aa12.1□□□□□ -0.47
LINC00461-208ENST00000508885 R3HDM1Q15032 1099 aaKnown RBP12.1□□□□□ -0.47
LINC00461-208ENST00000508885 TRPM3Q9HCF6 1732 aaPredicted RBP12.09□□□□□ -0.47
LINC00461-208ENST00000508885 EZH2Q15910 746 aaKnown RBP12.09□□□□□ -0.47
LINC00461-208ENST00000508885 SPATA31A1Q5TZJ5 1347 aa12.09□□□□□ -0.47
LINC00461-208ENST00000508885 COL14A1Q05707 1796 aaKnown RBP12.08□□□□□ -0.48
LINC00461-208ENST00000508885 ALS2Q96Q42 1657 aa12.08□□□□□ -0.48
LINC00461-208ENST00000508885 NBPF8Q3BBV2 869 aa12.08□□□□□ -0.48
LINC00461-208ENST00000508885 FAM196AQ6ZSG2 479 aa12.08□□□□□ -0.48
LINC00461-208ENST00000508885 ACEP12821 1306 aa12.08□□□□□ -0.48
LINC00461-208ENST00000508885 APBA3O96018 575 aa12.07□□□□□ -0.48
LINC00461-208ENST00000508885 PDE3BQ13370 1112 aa12.07□□□□□ -0.48
LINC00461-208ENST00000508885 NRAPQ86VF7 1730 aa12.07□□□□□ -0.48
LINC00461-208ENST00000508885 ABTB2Q8N961 1025 aa12.07□□□□□ -0.48
LINC00461-208ENST00000508885 CCDC61Q9Y6R9 512 aa12.07□□□□□ -0.48
LINC00461-208ENST00000508885 LARP1Q6PKG0 1096 aaKnown RBP12.05□□□□□ -0.48
LINC00461-208ENST00000508885 CAMKK2Q96RR4 588 aa12.05□□□□□ -0.48
LINC00461-208ENST00000508885 ATP7BP35670 1465 aa12.05□□□□□ -0.48
LINC00461-208ENST00000508885 PLEKHG3A1L390 1219 aa12.04□□□□□ -0.48
LINC00461-208ENST00000508885 ZBTB7CA1YPR0 619 aa12.04□□□□□ -0.48
LINC00461-208ENST00000508885 SRPK2P78362 688 aaKnown RBP12.04□□□□□ -0.48
LINC00461-208ENST00000508885 NBPF1Q3BBV0 1214 aa12.04□□□□□ -0.48
LINC00461-208ENST00000508885 TCP11L2Q8N4U5 519 aa12.04□□□□□ -0.48
LINC00461-208ENST00000508885 BARGINQ6ZT62 677 aa12.03□□□□□ -0.48
LINC00461-208ENST00000508885 NLRP13Q86W25 1043 aa12.03□□□□□ -0.48
LINC00461-208ENST00000508885 POLR3AO14802 1390 aaPredicted RBP12.03□□□□□ -0.48
LINC00461-208ENST00000508885 DISP2A7MBM2 1401 aa12.03□□□□□ -0.48
LINC00461-208ENST00000508885 LRP5O75197 1615 aa12.02□□□□□ -0.49
LINC00461-208ENST00000508885 GCP02774 474 aa12.02□□□□□ -0.49
LINC00461-208ENST00000508885 CABP2Q9NPB3 220 aa12.02□□□□□ -0.49
LINC00461-208ENST00000508885 SSH2Q76I76 1423 aa12.02□□□□□ -0.49
LINC00461-208ENST00000508885 THSD7AQ9UPZ6 1657 aa12.01□□□□□ -0.49
LINC00461-208ENST00000508885 RGPD1P0DJD0 1748 aa12.01□□□□□ -0.49
LINC00461-208ENST00000508885 ARHGEF28Q8N1W1 1705 aaKnown RBP12□□□□□ -0.49
LINC00461-208ENST00000508885 NBPF14Q5TI25 921 aa12□□□□□ -0.49
LINC00461-208ENST00000508885 CRYBG1Q9Y4K1 1723 aa12□□□□□ -0.49
LINC00461-208ENST00000508885 NLRP6P59044 892 aa11.99□□□□□ -0.49
LINC00461-208ENST00000508885 THRAP3Q9Y2W1 955 aaKnown RBP11.99□□□□□ -0.49
LINC00461-208ENST00000508885 USP19O94966 1318 aa11.99□□□□□ -0.49
LINC00461-208ENST00000508885 CENPJQ9HC77 1338 aaPredicted RBP11.99□□□□□ -0.49
LINC00461-208ENST00000508885 CAMTA1Q9Y6Y1 1673 aa11.99□□□□□ -0.49
LINC00461-208ENST00000508885 ITSN1Q15811 1721 aa11.99□□□□□ -0.49
LINC00461-208ENST00000508885 PPIP5K1Q6PFW1 1433 aa11.98□□□□□ -0.49
LINC00461-208ENST00000508885 CPDO75976 1380 aa11.98□□□□□ -0.49
LINC00461-208ENST00000508885 RNF39Q9H2S5 420 aa11.98□□□□□ -0.49
LINC00461-208ENST00000508885 CABP1Q9NZU7 370 aa11.98□□□□□ -0.49
LINC00461-208ENST00000508885 PHRF1Q9P1Y6 1649 aaKnown RBP11.97□□□□□ -0.49
LINC00461-208ENST00000508885 PARD3Q8TEW0 1356 aa11.97□□□□□ -0.49
LINC00461-208ENST00000508885 HOXD11P31277 338 aaPredicted RBP11.97□□□□□ -0.49
LINC00461-208ENST00000508885 TOM1L2Q6ZVM7 507 aa11.96□□□□□ -0.49
LINC00461-208ENST00000508885 PPP1R1BQ9UD71 204 aaPredicted RBP11.96□□□□□ -0.49
LINC00461-208ENST00000508885 TNS1Q9HBL0 1735 aaKnown RBP11.96□□□□□ -0.49
LINC00461-208ENST00000508885 NRKQ7Z2Y5 1582 aa11.94□□□□□ -0.5
LINC00461-208ENST00000508885 C11orf95C9JLR9 678 aaPredicted RBP11.94□□□□□ -0.5
LINC00461-208ENST00000508885 SOX12O15370 315 aa11.94□□□□□ -0.5
LINC00461-208ENST00000508885 DDB1Q16531 1140 aa11.94□□□□□ -0.5
LINC00461-208ENST00000508885 PPP4R3CPQ6ZMV5 832 aa11.94□□□□□ -0.5
LINC00461-208ENST00000508885 SPON1Q9HCB6 807 aa11.94□□□□□ -0.5
LINC00461-208ENST00000508885 BRD4O60885 1362 aaPredicted RBP11.93□□□□□ -0.5
LINC00461-208ENST00000508885 COL5A2P05997 1499 aaPredicted RBP11.93□□□□□ -0.5
LINC00461-208ENST00000508885 TOPAZ1Q8N9V7 1692 aa11.93□□□□□ -0.5
LINC00461-208ENST00000508885 CRB1P82279 1406 aa11.93□□□□□ -0.5
LINC00461-208ENST00000508885 AATKQ6ZMQ8 1374 aa11.92□□□□□ -0.5
LINC00461-208ENST00000508885 EVC2Q86UK5 1308 aa11.92□□□□□ -0.5
LINC00461-208ENST00000508885 KCNQ2O43526 872 aa11.92□□□□□ -0.5
LINC00461-208ENST00000508885 CSB-PGBD3P0DP91 1061 aa11.92□□□□□ -0.5
LINC00461-208ENST00000508885 YY1P25490 414 aa11.92□□□□□ -0.5
LINC00461-208ENST00000508885 L3MBTL2Q969R5 705 aa11.92□□□□□ -0.5
LINC00461-208ENST00000508885 AXIN2Q9Y2T1 843 aa11.92□□□□□ -0.5
LINC00461-208ENST00000508885 USP6P35125 1406 aa11.92□□□□□ -0.5
LINC00461-208ENST00000508885 LMO7Q8WWI1 1683 aa11.91□□□□□ -0.5
LINC00461-208ENST00000508885 KIAA1210Q9ULL0 1709 aa11.91□□□□□ -0.5
LINC00461-208ENST00000508885 OVOS2A0A0G2JMS6 1433 aa11.9□□□□□ -0.5
LINC00461-208ENST00000508885 OVOS2A0A0J9YW53 1432 aa11.9□□□□□ -0.5
LINC00461-208ENST00000508885 PLSCR1O15162 318 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms