RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 ARSIQ5FYB1 569 aa13.39□□□□□ -0.27
COL4A3BP-206ENST00000508809 PCDHGA4Q9Y5G9 962 aa13.39□□□□□ -0.27
COL4A3BP-206ENST00000508809 ADGRB3O60242 1522 aa13.39□□□□□ -0.27
COL4A3BP-206ENST00000508809 NWD1Q149M9 1564 aa13.38□□□□□ -0.27
COL4A3BP-206ENST00000508809 RPRD2Q5VT52 1461 aaKnown RBP13.38□□□□□ -0.27
COL4A3BP-206ENST00000508809 GPR153Q6NV75 609 aa13.38□□□□□ -0.27
COL4A3BP-206ENST00000508809 ROBO1Q9Y6N7 1651 aa13.37□□□□□ -0.27
COL4A3BP-206ENST00000508809 NKTRP30414 1462 aaKnown RBP13.37□□□□□ -0.27
COL4A3BP-206ENST00000508809 POTEAQ6S8J7 498 aa13.37□□□□□ -0.27
COL4A3BP-206ENST00000508809 PTCD2Q8WV60 388 aaKnown RBP13.37□□□□□ -0.27
COL4A3BP-206ENST00000508809 RBM33Q96EV2 1170 aaKnown RBP13.37□□□□□ -0.27
COL4A3BP-206ENST00000508809 ZFYVE9O95405 1425 aa13.37□□□□□ -0.27
COL4A3BP-206ENST00000508809 CHD2O14647 1828 aaKnown RBP13.36□□□□□ -0.27
COL4A3BP-206ENST00000508809 ZNF316A6NFI3 1004 aaPredicted RBP13.36□□□□□ -0.27
COL4A3BP-206ENST00000508809 HDGFP51858 240 aaKnown RBP13.36□□□□□ -0.27
COL4A3BP-206ENST00000508809 SLAIN2Q9P270 581 aa13.36□□□□□ -0.27
COL4A3BP-206ENST00000508809 ANKRD50Q9ULJ7 1429 aa13.36□□□□□ -0.27
COL4A3BP-206ENST00000508809 PLEKHG1Q9ULL1 1385 aa13.35□□□□□ -0.27
COL4A3BP-206ENST00000508809 MYO5BQ9ULV0 1848 aa13.35□□□□□ -0.27
COL4A3BP-206ENST00000508809 TSHZ2Q9NRE2 1034 aa13.35□□□□□ -0.27
COL4A3BP-206ENST00000508809 TBX22Q9Y458 520 aa13.35□□□□□ -0.27
COL4A3BP-206ENST00000508809 ERBB3P21860 1342 aa13.35□□□□□ -0.27
COL4A3BP-206ENST00000508809 MSH6P52701 1360 aa13.34□□□□□ -0.27
COL4A3BP-206ENST00000508809 UPF1Q92900 1129 aaKnown RBP eCLIP13.34□□□□□ -0.27
COL4A3BP-206ENST00000508809 NCOA3Q9Y6Q9 1424 aa13.33□□□□□ -0.28
COL4A3BP-206ENST00000508809 FAM205CA6NFA0 338 aa13.33□□□□□ -0.28
COL4A3BP-206ENST00000508809 BCANQ96GW7 911 aa13.33□□□□□ -0.28
COL4A3BP-206ENST00000508809 TMEM131LA2VDJ0 1609 aa13.32□□□□□ -0.28
COL4A3BP-206ENST00000508809 RIMS2Q9UQ26 1411 aa13.32□□□□□ -0.28
COL4A3BP-206ENST00000508809 NUDT7P0C024 238 aa13.31□□□□□ -0.28
COL4A3BP-206ENST00000508809 FAM50AQ14320 339 aaKnown RBP13.31□□□□□ -0.28
COL4A3BP-206ENST00000508809 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.31□□□□□ -0.28
COL4A3BP-206ENST00000508809 OXER1Q8TDS5 423 aa13.31□□□□□ -0.28
COL4A3BP-206ENST00000508809 JCADQ9P266 1359 aa13.31□□□□□ -0.28
COL4A3BP-206ENST00000508809 HAP1P54257 671 aaPredicted RBP13.3□□□□□ -0.28
COL4A3BP-206ENST00000508809 PCDH10Q9P2E7 1040 aa13.3□□□□□ -0.28
COL4A3BP-206ENST00000508809 GCC2Q8IWJ2 1684 aa13.3□□□□□ -0.28
COL4A3BP-206ENST00000508809 PHLPP1O60346 1717 aa13.3□□□□□ -0.28
COL4A3BP-206ENST00000508809 PPP1R15AO75807 674 aaPredicted RBP13.29□□□□□ -0.28
COL4A3BP-206ENST00000508809 MAP3K9P80192 1104 aa13.29□□□□□ -0.28
COL4A3BP-206ENST00000508809 PIK3R4Q99570 1358 aa13.29□□□□□ -0.28
COL4A3BP-206ENST00000508809 KHSRPQ92945 711 aaKnown RBP eCLIP13.28□□□□□ -0.281e-9■■□□□ 13.1
COL4A3BP-206ENST00000508809 C19orf44Q9H6X5 657 aa13.28□□□□□ -0.28
COL4A3BP-206ENST00000508809 ADAMTS13Q76LX8 1427 aa13.28□□□□□ -0.28
COL4A3BP-206ENST00000508809 UNC13BO14795 1591 aa13.28□□□□□ -0.28
COL4A3BP-206ENST00000508809 HS3ST6Q96QI5 342 aa13.27□□□□□ -0.29
COL4A3BP-206ENST00000508809 PSDA5PKW4 1024 aaPredicted RBP13.26□□□□□ -0.29
COL4A3BP-206ENST00000508809 E9PCH4 1651 aa13.26□□□□□ -0.29
COL4A3BP-206ENST00000508809 COL16A1Q07092 1604 aaPredicted RBP13.26□□□□□ -0.29
COL4A3BP-206ENST00000508809 ROCK1Q13464 1354 aa13.26□□□□□ -0.29
COL4A3BP-206ENST00000508809 E2F4Q16254 413 aa13.26□□□□□ -0.29
COL4A3BP-206ENST00000508809 SPATA31A6Q5VVP1 1343 aa13.25□□□□□ -0.29
COL4A3BP-206ENST00000508809 CAMK2BQ13554 666 aa13.25□□□□□ -0.29
COL4A3BP-206ENST00000508809 VARS2Q5ST30 1063 aaKnown RBP13.25□□□□□ -0.29
COL4A3BP-206ENST00000508809 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.25□□□□□ -0.29
COL4A3BP-206ENST00000508809 DIP2AQ14689 1571 aa13.24□□□□□ -0.29
COL4A3BP-206ENST00000508809 IQGAP3Q86VI3 1631 aa13.24□□□□□ -0.29
COL4A3BP-206ENST00000508809 ATF3P18847 181 aa13.23□□□□□ -0.29
COL4A3BP-206ENST00000508809 NUTM2DQ5VT03 806 aaPredicted RBP13.23□□□□□ -0.29
COL4A3BP-206ENST00000508809 CDAN1Q8IWY9 1227 aa13.23□□□□□ -0.29
COL4A3BP-206ENST00000508809 AHDC1Q5TGY3 1603 aaPredicted RBP13.22□□□□□ -0.29
COL4A3BP-206ENST00000508809 C14orf37Q86TY3 774 aa13.22□□□□□ -0.29
COL4A3BP-206ENST00000508809 AMOTL2Q9Y2J4 779 aa13.22□□□□□ -0.29
COL4A3BP-206ENST00000508809 PTPRUQ92729 1446 aa13.22□□□□□ -0.29
COL4A3BP-206ENST00000508809 ZNF772Q68DY9 489 aaPredicted RBP13.21□□□□□ -0.29
COL4A3BP-206ENST00000508809 EMILIN3Q9NT22 766 aa13.21□□□□□ -0.29
COL4A3BP-206ENST00000508809 LRP6O75581 1613 aa13.21□□□□□ -0.3
COL4A3BP-206ENST00000508809 NUP155O75694 1391 aa13.2□□□□□ -0.3
COL4A3BP-206ENST00000508809 BRINP3Q76B58 766 aa13.2□□□□□ -0.3
COL4A3BP-206ENST00000508809 LHX6Q9UPM6 363 aa13.2□□□□□ -0.3
COL4A3BP-206ENST00000508809 TRPM2O94759 1503 aa13.19□□□□□ -0.3
COL4A3BP-206ENST00000508809 SHPRHQ149N8 1683 aa13.19□□□□□ -0.3
COL4A3BP-206ENST00000508809 EVI5O60447 810 aa13.19□□□□□ -0.3
COL4A3BP-206ENST00000508809 SETD1AO15047 1707 aaKnown RBP13.19□□□□□ -0.3
COL4A3BP-206ENST00000508809 DCCP43146 1447 aa13.18□□□□□ -0.3
COL4A3BP-206ENST00000508809 NRXN3Q9Y4C0 1643 aa13.17□□□□□ -0.3
COL4A3BP-206ENST00000508809 SETBP1Q9Y6X0 1596 aa13.16□□□□□ -0.3
COL4A3BP-206ENST00000508809 DPYSL4O14531 572 aa13.16□□□□□ -0.3
COL4A3BP-206ENST00000508809 MEX3CQ5U5Q3 659 aaKnown RBP13.16□□□□□ -0.3
COL4A3BP-206ENST00000508809 SETD5Q9C0A6 1442 aa13.15□□□□□ -0.3
COL4A3BP-206ENST00000508809 PPP4R3BQ5MIZ7 849 aa13.15□□□□□ -0.3
COL4A3BP-206ENST00000508809 XRN1Q8IZH2 1706 aaKnown RBP13.15□□□□□ -0.3
COL4A3BP-206ENST00000508809 RXRBP28702 533 aa13.14□□□□□ -0.31
COL4A3BP-206ENST00000508809 ZNF687Q8N1G0 1237 aa13.14□□□□□ -0.31
COL4A3BP-206ENST00000508809 METP08581 1390 aa13.14□□□□□ -0.31
COL4A3BP-206ENST00000508809 MST1RQ04912 1400 aa13.13□□□□□ -0.31
COL4A3BP-206ENST00000508809 LRRC59Q96AG4 307 aaKnown RBP13.13□□□□□ -0.31
COL4A3BP-206ENST00000508809 SPHKAPQ2M3C7 1700 aa13.13□□□□□ -0.31
COL4A3BP-206ENST00000508809 ASXL1Q8IXJ9 1541 aa13.13□□□□□ -0.31
COL4A3BP-206ENST00000508809 CDK12Q9NYV4 1490 aaPredicted RBP13.12□□□□□ -0.31
COL4A3BP-206ENST00000508809 ZNF326Q5BKZ1 582 aaKnown RBP13.12□□□□□ -0.31
COL4A3BP-206ENST00000508809 TRIM52Q96A61 297 aa13.12□□□□□ -0.31
COL4A3BP-206ENST00000508809 NHSL1Q5SYE7 1610 aa13.12□□□□□ -0.31
COL4A3BP-206ENST00000508809 POTEB3A0JP26 581 aa13.11□□□□□ -0.31
COL4A3BP-206ENST00000508809 NUTM2BA6NNL0 878 aaPredicted RBP13.11□□□□□ -0.31
COL4A3BP-206ENST00000508809 SPDYE16A6NNV3 312 aaPredicted RBP13.11□□□□□ -0.31
COL4A3BP-206ENST00000508809 NUTM2EB1AL46 878 aaPredicted RBP13.11□□□□□ -0.31
COL4A3BP-206ENST00000508809 ITGAEP38570 1179 aa13.11□□□□□ -0.31
COL4A3BP-206ENST00000508809 POTEBQ6S5H4 581 aa13.11□□□□□ -0.31
COL4A3BP-206ENST00000508809 NUTM2AQ8IVF1 878 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms