RNA–Protein interactions for RNA: ENST00000508708.1

CSNK1G3-204, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 2

Gene CSNK1G3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-204ENST00000508708 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.39■■■□□ 2.94
CSNK1G3-204ENST00000508708 QTRT2Q9H974 415 aaKnown RBP33.39■■■□□ 2.94
CSNK1G3-204ENST00000508708 EVC2Q86UK5 1308 aa33.38■■■□□ 2.93
CSNK1G3-204ENST00000508708 CLSPNQ9HAW4 1339 aa33.38■■■□□ 2.93
CSNK1G3-204ENST00000508708 RBM6P78332 1123 aaKnown RBP33.35■■■□□ 2.93
CSNK1G3-204ENST00000508708 RGS12O14924 1447 aa33.35■■■□□ 2.93
CSNK1G3-204ENST00000508708 PLCH1Q4KWH8 1693 aa33.33■■■□□ 2.93
CSNK1G3-204ENST00000508708 TRPC5Q9UL62 973 aaPredicted RBP33.33■■■□□ 2.93
CSNK1G3-204ENST00000508708 PAK3O75914 559 aaPredicted RBP33.32■■■□□ 2.92
CSNK1G3-204ENST00000508708 PLEKHG5O94827 1062 aa33.31■■■□□ 2.92
CSNK1G3-204ENST00000508708 HAP1P54257 671 aaPredicted RBP33.31■■■□□ 2.92
CSNK1G3-204ENST00000508708 PHRF1Q9P1Y6 1649 aaKnown RBP33.31■■■□□ 2.92
CSNK1G3-204ENST00000508708 NWD2Q9ULI1 1742 aa33.31■■■□□ 2.92
CSNK1G3-204ENST00000508708 CABP1Q9NZU7 370 aa33.29■■■□□ 2.92
CSNK1G3-204ENST00000508708 USP6P35125 1406 aa33.28■■■□□ 2.92
CSNK1G3-204ENST00000508708 BRD4O60885 1362 aaPredicted RBP33.26■■■□□ 2.92
CSNK1G3-204ENST00000508708 UNC5CLQ8IV45 518 aa33.26■■■□□ 2.91
CSNK1G3-204ENST00000508708 ATAD2Q6PL18 1390 aa33.25■■■□□ 2.91
CSNK1G3-204ENST00000508708 SSH2Q76I76 1423 aa33.25■■■□□ 2.91
CSNK1G3-204ENST00000508708 TIMELESSQ9UNS1 1208 aa33.24■■■□□ 2.91
CSNK1G3-204ENST00000508708 NRAPQ86VF7 1730 aa33.24■■■□□ 2.91
CSNK1G3-204ENST00000508708 COL14A1Q05707 1796 aaKnown RBP33.24■■■□□ 2.91
CSNK1G3-204ENST00000508708 GLI3P10071 1580 aa33.23■■■□□ 2.91
CSNK1G3-204ENST00000508708 NRKQ7Z2Y5 1582 aa33.22■■■□□ 2.91
CSNK1G3-204ENST00000508708 AKAP12Q02952 1782 aa33.22■■■□□ 2.91
CSNK1G3-204ENST00000508708 FAM83GA6ND36 823 aa33.22■■■□□ 2.91
CSNK1G3-204ENST00000508708 USP19O94966 1318 aa33.2■■■□□ 2.91
CSNK1G3-204ENST00000508708 CPSF1Q10570 1443 aaKnown RBP33.19■■■□□ 2.9
CSNK1G3-204ENST00000508708 NUTM2GQ5VZR2 741 aa33.18■■■□□ 2.9
CSNK1G3-204ENST00000508708 GJD4Q96KN9 370 aaPredicted RBP33.18■■■□□ 2.9
CSNK1G3-204ENST00000508708 TESK2Q96S53 571 aa33.18■■■□□ 2.9
CSNK1G3-204ENST00000508708 PIK3C2AO00443 1686 aa33.17■■■□□ 2.9
CSNK1G3-204ENST00000508708 ABTB2Q8N961 1025 aa33.16■■■□□ 2.9
CSNK1G3-204ENST00000508708 CD163L1Q9NR16 1453 aa33.14■■■□□ 2.9
CSNK1G3-204ENST00000508708 KIAA0232Q92628 1395 aa33.14■■■□□ 2.9
CSNK1G3-204ENST00000508708 ST20-MTHFSA0A0A6YYL1 179 aa33.14■■■□□ 2.9
CSNK1G3-204ENST00000508708 VPS72Q15906 364 aa33.14■■■□□ 2.9
CSNK1G3-204ENST00000508708 MON2Q7Z3U7 1717 aa33.14■■■□□ 2.89
CSNK1G3-204ENST00000508708 USP47Q96K76 1375 aa33.13■■■□□ 2.89
CSNK1G3-204ENST00000508708 SLIT3O75094 1523 aa33.12■■■□□ 2.89
CSNK1G3-204ENST00000508708 BTG4Q9NY30 223 aa33.11■■■□□ 2.89
CSNK1G3-204ENST00000508708 PRDM11Q9NQV5 511 aa33.1■■■□□ 2.89
CSNK1G3-204ENST00000508708 PUS7Q96PZ0 661 aaKnown RBP33.09■■■□□ 2.89
CSNK1G3-204ENST00000508708 ZNF692Q9BU19 519 aaPredicted RBP33.09■■■□□ 2.89
CSNK1G3-204ENST00000508708 CPDO75976 1380 aa33.09■■■□□ 2.89
CSNK1G3-204ENST00000508708 NLRP13Q86W25 1043 aa33.08■■■□□ 2.89
CSNK1G3-204ENST00000508708 CCER1Q8TC90 406 aaPredicted RBP33.08■■■□□ 2.89
CSNK1G3-204ENST00000508708 UPF1Q92900 1129 aaKnown RBP eCLIP33.07■■■□□ 2.88
CSNK1G3-204ENST00000508708 TTC21BQ7Z4L5 1316 aa33.06■■■□□ 2.88
CSNK1G3-204ENST00000508708 LMO7Q8WWI1 1683 aa33.06■■■□□ 2.88
CSNK1G3-204ENST00000508708 EP400Q96L91 3159 aa33.06■■■□□ 2.88
CSNK1G3-204ENST00000508708 ZC3H6P61129 1189 aaKnown RBP33.05■■■□□ 2.88
CSNK1G3-204ENST00000508708 KTN1Q86UP2 1357 aaKnown RBP33.05■■■□□ 2.88
CSNK1G3-204ENST00000508708 GCP02774 474 aa33.03■■■□□ 2.88
CSNK1G3-204ENST00000508708 CHRNA2Q15822 529 aa33.03■■■□□ 2.88
CSNK1G3-204ENST00000508708 TTC21AQ8NDW8 1320 aa33.02■■■□□ 2.88
CSNK1G3-204ENST00000508708 NLRP6P59044 892 aa33.01■■■□□ 2.87
CSNK1G3-204ENST00000508708 SLC12A5Q9H2X9 1139 aa33■■■□□ 2.87
CSNK1G3-204ENST00000508708 USP54Q70EL1 1684 aa33■■■□□ 2.87
CSNK1G3-204ENST00000508708 CAMTA1Q9Y6Y1 1673 aa32.99■■■□□ 2.87
CSNK1G3-204ENST00000508708 ONECUT3O60422 494 aaPredicted RBP32.99■■■□□ 2.87
CSNK1G3-204ENST00000508708 SLC24A1O60721 1099 aa32.99■■■□□ 2.87
CSNK1G3-204ENST00000508708 A0A1W2PP64 1363 aa32.98■■■□□ 2.87
CSNK1G3-204ENST00000508708 NINLQ9Y2I6 1382 aa32.98■■■□□ 2.87
CSNK1G3-204ENST00000508708 TMC1Q8TDI8 760 aa32.98■■■□□ 2.87
CSNK1G3-204ENST00000508708 CCDC9Q9Y3X0 531 aaKnown RBP32.98■■■□□ 2.87
CSNK1G3-204ENST00000508708 BRWD3Q6RI45 1802 aa32.98■■■□□ 2.87
CSNK1G3-204ENST00000508708 SPATA31A5Q5VU36 1347 aa32.97■■■□□ 2.87
CSNK1G3-204ENST00000508708 SPATA31A7Q8IWB4 1347 aa32.97■■■□□ 2.87
CSNK1G3-204ENST00000508708 EDC4Q6P2E9 1401 aaKnown RBP32.94■■■□□ 2.86
CSNK1G3-204ENST00000508708 NFAT5O94916 1531 aa32.93■■■□□ 2.86
CSNK1G3-204ENST00000508708 SEPT12Q8IYM1 358 aa32.93■■■□□ 2.86
CSNK1G3-204ENST00000508708 THSD7AQ9UPZ6 1657 aa32.93■■■□□ 2.86
CSNK1G3-204ENST00000508708 USP31Q70CQ4 1352 aa32.93■■■□□ 2.86
CSNK1G3-204ENST00000508708 HDGFL2Q7Z4V5 671 aaPredicted RBP32.92■■■□□ 2.86
CSNK1G3-204ENST00000508708 COL18A1P39060 1754 aa32.91■■■□□ 2.86
CSNK1G3-204ENST00000508708 TMF1P82094 1093 aa32.91■■■□□ 2.86
CSNK1G3-204ENST00000508708 COL5A2P05997 1499 aaPredicted RBP32.91■■■□□ 2.86
CSNK1G3-204ENST00000508708 TERF2IPQ9NYB0 399 aa32.9■■■□□ 2.86
CSNK1G3-204ENST00000508708 AATKQ6ZMQ8 1374 aa32.89■■■□□ 2.86
CSNK1G3-204ENST00000508708 SPATA31A1Q5TZJ5 1347 aa32.89■■■□□ 2.86
CSNK1G3-204ENST00000508708 FAM98CQ17RN3 349 aaKnown RBP32.88■■■□□ 2.85
CSNK1G3-204ENST00000508708 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.88■■■□□ 2.85
CSNK1G3-204ENST00000508708 STRN4Q9NRL3 753 aa32.88■■■□□ 2.85
CSNK1G3-204ENST00000508708 ZRANB1Q9UGI0 708 aa32.87■■■□□ 2.85
CSNK1G3-204ENST00000508708 NME9Q86XW9 330 aa32.86■■■□□ 2.85
CSNK1G3-204ENST00000508708 OVOS2A0A0J9YW53 1432 aa32.85■■■□□ 2.85
CSNK1G3-204ENST00000508708 OVOS2Q6IE36 1432 aa32.85■■■□□ 2.85
CSNK1G3-204ENST00000508708 KCNH5Q8NCM2 988 aa32.85■■■□□ 2.85
CSNK1G3-204ENST00000508708 ANKRD36BQ8N2N9 1353 aa32.84■■■□□ 2.85
CSNK1G3-204ENST00000508708 ARHGEF25Q86VW2 580 aa32.84■■■□□ 2.85
CSNK1G3-204ENST00000508708 MYOM1P52179 1685 aa32.82■■■□□ 2.84
CSNK1G3-204ENST00000508708 LARP1Q6PKG0 1096 aaKnown RBP32.82■■■□□ 2.84
CSNK1G3-204ENST00000508708 ABCC6O95255 1503 aa32.82■■■□□ 2.84
CSNK1G3-204ENST00000508708 EVA1CP58658 441 aa32.79■■■□□ 2.84
CSNK1G3-204ENST00000508708 KRT27Q7Z3Y8 459 aa32.79■■■□□ 2.84
CSNK1G3-204ENST00000508708 ZBTB7CA1YPR0 619 aa32.78■■■□□ 2.84
CSNK1G3-204ENST00000508708 SOX12O15370 315 aa32.78■■■□□ 2.84
CSNK1G3-204ENST00000508708 CDCA8Q53HL2 280 aa32.78■■■□□ 2.84
CSNK1G3-204ENST00000508708 AXIN2Q9Y2T1 843 aa32.77■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms