RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 GOLGA6L10A6NI86 522 aa8.7□□□□□ -1.02
UBE2D3-224ENST00000508474 TERF1P54274 439 aa8.7□□□□□ -1.02
UBE2D3-224ENST00000508474 ANKRD1Q15327 319 aa8.7□□□□□ -1.02
UBE2D3-224ENST00000508474 CHD1LQ86WJ1 897 aa8.7□□□□□ -1.02
UBE2D3-224ENST00000508474 KRT222Q8N1A0 295 aa8.7□□□□□ -1.02
UBE2D3-224ENST00000508474 IRX3P78415 501 aaPredicted RBP8.69□□□□□ -1.02
UBE2D3-224ENST00000508474 TAF7LQ5H9L4 462 aa8.69□□□□□ -1.02
UBE2D3-224ENST00000508474 CTR9Q6PD62 1173 aa8.69□□□□□ -1.02
UBE2D3-224ENST00000508474 CEP57L1Q8IYX8 460 aa8.69□□□□□ -1.02
UBE2D3-224ENST00000508474 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.69□□□□□ -1.02
UBE2D3-224ENST00000508474 ZSCAN31Q96LW9 406 aaPredicted RBP8.69□□□□□ -1.02
UBE2D3-224ENST00000508474 SHTN1A0MZ66 631 aa8.69□□□□□ -1.02
UBE2D3-224ENST00000508474 SOX12O15370 315 aa8.69□□□□□ -1.02
UBE2D3-224ENST00000508474 BCAR3O75815 825 aa8.69□□□□□ -1.02
UBE2D3-224ENST00000508474 KIF20AO95235 890 aa8.69□□□□□ -1.02
UBE2D3-224ENST00000508474 FBXW7Q969H0 707 aa8.69□□□□□ -1.02
UBE2D3-224ENST00000508474 INCENPQ9NQS7 918 aa8.69□□□□□ -1.02
UBE2D3-224ENST00000508474 DACH1Q9UI36 760 aa8.69□□□□□ -1.02
UBE2D3-224ENST00000508474 MAP3K11Q16584 847 aa8.69□□□□□ -1.02
UBE2D3-224ENST00000508474 ERICH3Q5RHP9 1530 aa8.69□□□□□ -1.02
UBE2D3-224ENST00000508474 PLEKHG5O94827 1062 aa8.69□□□□□ -1.02
UBE2D3-224ENST00000508474 PLPPR3Q6T4P5 718 aa8.69□□□□□ -1.02
UBE2D3-224ENST00000508474 TCP11L2Q8N4U5 519 aa8.69□□□□□ -1.02
UBE2D3-224ENST00000508474 MCM3P25205 808 aa8.68□□□□□ -1.02
UBE2D3-224ENST00000508474 TRDNQ13061 729 aa8.68□□□□□ -1.02
UBE2D3-224ENST00000508474 CCDC184Q52MB2 194 aa8.68□□□□□ -1.02
UBE2D3-224ENST00000508474 TOMM22Q9NS69 142 aa8.68□□□□□ -1.02
UBE2D3-224ENST00000508474 SMTNL1A8MU46 457 aa8.68□□□□□ -1.02
UBE2D3-224ENST00000508474 POTEB2H3BUK9 544 aa8.68□□□□□ -1.02
UBE2D3-224ENST00000508474 ZSCAN12O43309 604 aa8.68□□□□□ -1.02
UBE2D3-224ENST00000508474 SERPINC1P01008 464 aa8.68□□□□□ -1.02
UBE2D3-224ENST00000508474 TNNT1P13805 278 aa8.68□□□□□ -1.02
UBE2D3-224ENST00000508474 CCDC102AQ96A19 550 aa8.68□□□□□ -1.02
UBE2D3-224ENST00000508474 LRRCC1Q9C099 1032 aa8.68□□□□□ -1.02
UBE2D3-224ENST00000508474 FYCO1Q9BQS8 1478 aa8.68□□□□□ -1.02
UBE2D3-224ENST00000508474 NAP1L1P55209 391 aaKnown RBP8.68□□□□□ -1.02
UBE2D3-224ENST00000508474 GNAI3P08754 354 aa8.67□□□□□ -1.02
UBE2D3-224ENST00000508474 JMYQ8N9B5 988 aa8.67□□□□□ -1.02
UBE2D3-224ENST00000508474 ZKSCAN5Q9Y2L8 839 aa8.67□□□□□ -1.02
UBE2D3-224ENST00000508474 GTF2A1P52655 376 aaPredicted RBP8.67□□□□□ -1.02
UBE2D3-224ENST00000508474 SLFN5Q08AF3 891 aa8.67□□□□□ -1.02
UBE2D3-224ENST00000508474 G3BP1Q13283 466 aaKnown RBP eCLIP8.67□□□□□ -1.02
UBE2D3-224ENST00000508474 MAPK8IP2Q13387 824 aaPredicted RBP8.67□□□□□ -1.02
UBE2D3-224ENST00000508474 MAP9Q49MG5 647 aa8.67□□□□□ -1.02
UBE2D3-224ENST00000508474 PPFIBP1Q86W92 1011 aa8.67□□□□□ -1.02
UBE2D3-224ENST00000508474 MPNDQ8N594 471 aa8.67□□□□□ -1.02
UBE2D3-224ENST00000508474 ZNF428Q96B54 188 aa8.67□□□□□ -1.02
UBE2D3-224ENST00000508474 FEZ1Q99689 392 aa8.67□□□□□ -1.02
UBE2D3-224ENST00000508474 CFAP45Q9UL16 551 aa8.67□□□□□ -1.02
UBE2D3-224ENST00000508474 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.67□□□□□ -1.02
UBE2D3-224ENST00000508474 HFM1A2PYH4 1435 aa8.67□□□□□ -1.02
UBE2D3-224ENST00000508474 MICALCLQ6ZW33 695 aa8.66□□□□□ -1.02
UBE2D3-224ENST00000508474 TBC1D32Q96NH3 1257 aa8.66□□□□□ -1.02
UBE2D3-224ENST00000508474 PPP6R1Q9UPN7 881 aa8.66□□□□□ -1.02
UBE2D3-224ENST00000508474 CYP46A1Q9Y6A2 500 aa8.66□□□□□ -1.02
UBE2D3-224ENST00000508474 MARCH6O60337 910 aa8.66□□□□□ -1.02
UBE2D3-224ENST00000508474 GTF2F1P35269 517 aaKnown RBP eCLIP8.66□□□□□ -1.02
UBE2D3-224ENST00000508474 ATF7IPQ6VMQ6 1270 aa8.66□□□□□ -1.02
UBE2D3-224ENST00000508474 TRAK1Q9UPV9 953 aa8.66□□□□□ -1.02
UBE2D3-224ENST00000508474 ERLIN2O94905 339 aa8.66□□□□□ -1.02
UBE2D3-224ENST00000508474 IVLP07476 585 aa8.66□□□□□ -1.02
UBE2D3-224ENST00000508474 RBM25P49756 843 aaKnown RBP8.66□□□□□ -1.02
UBE2D3-224ENST00000508474 HNRNPMP52272 730 aaKnown RBP eCLIP8.66□□□□□ -1.024e-13■■■■■ 32.7
UBE2D3-224ENST00000508474 SRCIN1Q9C0H9 1055 aa8.66□□□□□ -1.02
UBE2D3-224ENST00000508474 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.66□□□□□ -1.02
UBE2D3-224ENST00000508474 DHX16O60231 1041 aaKnown RBP8.66□□□□□ -1.02
UBE2D3-224ENST00000508474 LMOD2Q6P5Q4 547 aa8.66□□□□□ -1.02
UBE2D3-224ENST00000508474 SPATA32Q96LK8 384 aa8.66□□□□□ -1.02
UBE2D3-224ENST00000508474 C9orf78Q9NZ63 289 aaPredicted RBP8.66□□□□□ -1.02
UBE2D3-224ENST00000508474 STK38Q15208 465 aa8.65□□□□□ -1.02
UBE2D3-224ENST00000508474 COG3Q96JB2 828 aa8.65□□□□□ -1.02
UBE2D3-224ENST00000508474 CASKIN1Q8WXD9 1431 aa8.65□□□□□ -1.02
UBE2D3-224ENST00000508474 UPF3BQ9BZI7 483 aaKnown RBP8.65□□□□□ -1.02
UBE2D3-224ENST00000508474 ZNHIT6Q9NWK9 470 aaKnown RBP8.65□□□□□ -1.02
UBE2D3-224ENST00000508474 CAVIN2O95810 425 aa8.65□□□□□ -1.02
UBE2D3-224ENST00000508474 SFPQP23246 707 aaKnown RBP eCLIP8.65□□□□□ -1.02
UBE2D3-224ENST00000508474 GSDMDP57764 484 aa8.65□□□□□ -1.02
UBE2D3-224ENST00000508474 EXOSC9Q06265 439 aaKnown RBP8.65□□□□□ -1.02
UBE2D3-224ENST00000508474 NEXNQ0ZGT2 675 aa8.65□□□□□ -1.02
UBE2D3-224ENST00000508474 TTLL5Q6EMB2 1281 aa8.65□□□□□ -1.02
UBE2D3-224ENST00000508474 LRSAM1Q6UWE0 723 aa8.65□□□□□ -1.02
UBE2D3-224ENST00000508474 NOB1Q9ULX3 412 aaKnown RBP8.65□□□□□ -1.02
UBE2D3-224ENST00000508474 SPDYE4A6NLX3 237 aa8.65□□□□□ -1.03
UBE2D3-224ENST00000508474 TUBB4AP04350 444 aa8.65□□□□□ -1.03
UBE2D3-224ENST00000508474 FKBP5Q13451 457 aaPredicted RBP8.65□□□□□ -1.03
UBE2D3-224ENST00000508474 FMNL2Q96PY5 1086 aa8.65□□□□□ -1.03
UBE2D3-224ENST00000508474 CRACR2AQ9BSW2 395 aa8.65□□□□□ -1.03
UBE2D3-224ENST00000508474 BAG4O95429 457 aaKnown RBP8.64□□□□□ -1.03
UBE2D3-224ENST00000508474 SSFA2P28290 1259 aa8.64□□□□□ -1.03
UBE2D3-224ENST00000508474 LARP1BQ659C4 914 aaKnown RBP8.64□□□□□ -1.03
UBE2D3-224ENST00000508474 POLA1P09884 1462 aaPredicted RBP8.64□□□□□ -1.03
UBE2D3-224ENST00000508474 CCDC171Q6TFL3 1326 aa8.64□□□□□ -1.03
UBE2D3-224ENST00000508474 NOLC1Q14978 699 aaKnown RBP eCLIP8.64□□□□□ -1.03
UBE2D3-224ENST00000508474 GPATCH11Q8N954 259 aa8.64□□□□□ -1.03
UBE2D3-224ENST00000508474 LUC7LQ9NQ29 371 aaKnown RBP8.64□□□□□ -1.03
UBE2D3-224ENST00000508474 AMPHP49418 695 aa8.64□□□□□ -1.03
UBE2D3-224ENST00000508474 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.64□□□□□ -1.03
UBE2D3-224ENST00000508474 OGFRQ9NZT2 677 aa8.64□□□□□ -1.03
UBE2D3-224ENST00000508474 USP25Q9UHP3 1055 aa8.64□□□□□ -1.03
UBE2D3-224ENST00000508474 LRPPRCP42704 1394 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms