RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 ZC3H4Q9UPT8 1303 aaKnown RBP12.38□□□□□ -0.43
COL6A4P1-204ENST00000508169 NR1H3Q13133 447 aa12.37□□□□□ -0.43
COL6A4P1-204ENST00000508169 IL21Q9HBE4 155 aa12.37□□□□□ -0.43
COL6A4P1-204ENST00000508169 EVA1BQ9NVM1 165 aa12.37□□□□□ -0.43
COL6A4P1-204ENST00000508169 ZBBXA8MT70 800 aa12.36□□□□□ -0.43
COL6A4P1-204ENST00000508169 EIF4G2P78344 907 aaKnown RBP eCLIP12.36□□□□□ -0.43
COL6A4P1-204ENST00000508169 KCNH2Q12809 1159 aa12.36□□□□□ -0.43
COL6A4P1-204ENST00000508169 SEMA3FQ13275 785 aa12.36□□□□□ -0.43
COL6A4P1-204ENST00000508169 TJAP1Q5JTD0 557 aa12.36□□□□□ -0.43
COL6A4P1-204ENST00000508169 FBXO45P0C2W1 286 aa12.34□□□□□ -0.43
COL6A4P1-204ENST00000508169 ARMC2Q8NEN0 867 aa12.34□□□□□ -0.43
COL6A4P1-204ENST00000508169 ZNF516Q92618 1163 aa12.34□□□□□ -0.43
COL6A4P1-204ENST00000508169 MYT1LQ9UL68 1186 aa12.34□□□□□ -0.43
COL6A4P1-204ENST00000508169 SLC6A16Q9GZN6 736 aa12.33□□□□□ -0.44
COL6A4P1-204ENST00000508169 PPP1R15AO75807 674 aaPredicted RBP12.31□□□□□ -0.44
COL6A4P1-204ENST00000508169 GPKOWQ92917 476 aaPredicted RBP eCLIP12.31□□□□□ -0.44
COL6A4P1-204ENST00000508169 PPP1R12CQ9BZL4 782 aa12.31□□□□□ -0.44
COL6A4P1-204ENST00000508169 NBPF14Q5TI25 921 aa12.3□□□□□ -0.44
COL6A4P1-204ENST00000508169 CCDC24Q8N4L8 307 aa12.3□□□□□ -0.44
COL6A4P1-204ENST00000508169 CFAP70Q5T0N1 1121 aa12.29□□□□□ -0.44
COL6A4P1-204ENST00000508169 PDXDC2PQ6P474 469 aa12.29□□□□□ -0.44
COL6A4P1-204ENST00000508169 UCN2Q96RP3 112 aa12.29□□□□□ -0.44
COL6A4P1-204ENST00000508169 GPSM3Q9Y4H4 160 aa12.29□□□□□ -0.44
COL6A4P1-204ENST00000508169 PDIA4P13667 645 aaKnown RBP12.28□□□□□ -0.44
COL6A4P1-204ENST00000508169 PTK2Q05397 1052 aa12.28□□□□□ -0.44
COL6A4P1-204ENST00000508169 PALM3A6NDB9 673 aaPredicted RBP12.27□□□□□ -0.45
COL6A4P1-204ENST00000508169 RFX1P22670 979 aa12.27□□□□□ -0.45
COL6A4P1-204ENST00000508169 UNC93B1Q9H1C4 597 aa12.27□□□□□ -0.45
COL6A4P1-204ENST00000508169 NKX2-3Q8TAU0 364 aa12.26□□□□□ -0.45
COL6A4P1-204ENST00000508169 PBXIP1Q96AQ6 731 aa12.26□□□□□ -0.45
COL6A4P1-204ENST00000508169 S1PR4O95977 384 aa12.25□□□□□ -0.45
COL6A4P1-204ENST00000508169 PTCRAQ6ISU1 281 aaPredicted RBP12.25□□□□□ -0.45
COL6A4P1-204ENST00000508169 TFIP11Q9UBB9 837 aaKnown RBP12.25□□□□□ -0.45
COL6A4P1-204ENST00000508169 ACIN1Q9UKV3 1341 aaKnown RBP12.24□□□□□ -0.45
COL6A4P1-204ENST00000508169 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.23□□□□□ -0.45
COL6A4P1-204ENST00000508169 LMOD1P29536 600 aaPredicted RBP12.23□□□□□ -0.45
COL6A4P1-204ENST00000508169 RETREG2Q8NC44 543 aa12.23□□□□□ -0.45
COL6A4P1-204ENST00000508169 ZNF592Q92610 1267 aa12.23□□□□□ -0.45
COL6A4P1-204ENST00000508169 ARHGAP9Q9BRR9 750 aa12.23□□□□□ -0.45
COL6A4P1-204ENST00000508169 TBC1D9Q6ZT07 1266 aa12.22□□□□□ -0.45
COL6A4P1-204ENST00000508169 OCSTAMPQ9BR26 566 aa12.22□□□□□ -0.45
COL6A4P1-204ENST00000508169 HCSTQ9UBK5 93 aa12.21□□□□□ -0.45
COL6A4P1-204ENST00000508169 FCF1Q9Y324 198 aaKnown RBP12.21□□□□□ -0.45
COL6A4P1-204ENST00000508169 MAFBQ9Y5Q3 323 aaPredicted RBP12.21□□□□□ -0.45
COL6A4P1-204ENST00000508169 ATP9BO43861 1147 aa12.2□□□□□ -0.46
COL6A4P1-204ENST00000508169 PCDHB9Q9Y5E1 797 aa12.2□□□□□ -0.46
COL6A4P1-204ENST00000508169 MCCD1P59942 119 aaPredicted RBP12.19□□□□□ -0.46
COL6A4P1-204ENST00000508169 SRPK2P78362 688 aaKnown RBP12.19□□□□□ -0.46
COL6A4P1-204ENST00000508169 SH3BP5LQ7L8J4 393 aa12.19□□□□□ -0.46
COL6A4P1-204ENST00000508169 ADAM32Q8TC27 787 aa12.19□□□□□ -0.46
COL6A4P1-204ENST00000508169 PIK3CDO00329 1044 aa12.18□□□□□ -0.46
COL6A4P1-204ENST00000508169 KCNC4Q03721 635 aa12.18□□□□□ -0.46
COL6A4P1-204ENST00000508169 ZBTB33Q86T24 672 aa12.18□□□□□ -0.46
COL6A4P1-204ENST00000508169 NFATC2IPQ8NCF5 419 aa12.18□□□□□ -0.46
COL6A4P1-204ENST00000508169 RNF166Q96A37 237 aaPredicted RBP12.18□□□□□ -0.46
COL6A4P1-204ENST00000508169 TRAIPQ9BWF2 469 aa12.18□□□□□ -0.46
COL6A4P1-204ENST00000508169 BAP1Q92560 729 aa12.17□□□□□ -0.46
COL6A4P1-204ENST00000508169 ITGBL1O95965 494 aaPredicted RBP12.16□□□□□ -0.46
COL6A4P1-204ENST00000508169 CEP126Q9P2H0 1117 aa12.16□□□□□ -0.46
COL6A4P1-204ENST00000508169 SKIP12755 728 aa12.15□□□□□ -0.46
COL6A4P1-204ENST00000508169 LINC01559Q495D7 138 aa12.15□□□□□ -0.46
COL6A4P1-204ENST00000508169 SH3RF1Q7Z6J0 888 aa12.15□□□□□ -0.46
COL6A4P1-204ENST00000508169 CARD14Q9BXL6 1004 aa12.15□□□□□ -0.46
COL6A4P1-204ENST00000508169 MAGEB6P1A0A0J9YX57 407 aa12.14□□□□□ -0.47
COL6A4P1-204ENST00000508169 TRIM26Q12899 539 aaPredicted RBP12.14□□□□□ -0.47
COL6A4P1-204ENST00000508169 AGERQ15109 404 aa12.14□□□□□ -0.47
COL6A4P1-204ENST00000508169 SLFNL1Q499Z3 407 aa12.14□□□□□ -0.47
COL6A4P1-204ENST00000508169 BPHLQ86WA6 291 aaPredicted RBP12.14□□□□□ -0.47
COL6A4P1-204ENST00000508169 ZNF511Q8NB15 262 aa12.14□□□□□ -0.47
COL6A4P1-204ENST00000508169 PDE4CQ08493 712 aa12.13□□□□□ -0.47
COL6A4P1-204ENST00000508169 DZIP3Q86Y13 1208 aaKnown RBP12.13□□□□□ -0.47
COL6A4P1-204ENST00000508169 FAM174AQ8TBP5 190 aa12.13□□□□□ -0.47
COL6A4P1-204ENST00000508169 PCDH10Q9P2E7 1040 aa12.13□□□□□ -0.47
COL6A4P1-204ENST00000508169 PPEF1O14829 653 aaPredicted RBP12.12□□□□□ -0.47
COL6A4P1-204ENST00000508169 CDCA8Q53HL2 280 aa12.12□□□□□ -0.47
COL6A4P1-204ENST00000508169 FOXJ1Q92949 421 aa12.12□□□□□ -0.47
COL6A4P1-204ENST00000508169 USP17L3A6NCW0 530 aa12.11□□□□□ -0.47
COL6A4P1-204ENST00000508169 USP17L4A6NCW7 530 aa12.11□□□□□ -0.47
COL6A4P1-204ENST00000508169 USP17L5A8MUK1 530 aa12.11□□□□□ -0.47
COL6A4P1-204ENST00000508169 CSB-PGBD3P0DP91 1061 aa12.11□□□□□ -0.47
COL6A4P1-204ENST00000508169 USP17L2Q6R6M4 530 aa12.11□□□□□ -0.47
COL6A4P1-204ENST00000508169 USP17L1Q7RTZ2 530 aa12.11□□□□□ -0.47
COL6A4P1-204ENST00000508169 RNF135Q8IUD6 432 aa12.11□□□□□ -0.47
COL6A4P1-204ENST00000508169 SPNS2Q8IVW8 549 aa12.11□□□□□ -0.47
COL6A4P1-204ENST00000508169 GGCXP38435 758 aa12.1□□□□□ -0.47
COL6A4P1-204ENST00000508169 PLEKHM2Q8IWE5 1019 aa12.1□□□□□ -0.47
COL6A4P1-204ENST00000508169 VRTNQ9H8Y1 702 aa12.1□□□□□ -0.47
COL6A4P1-204ENST00000508169 RNF223E7ERA6 249 aa12.09□□□□□ -0.47
COL6A4P1-204ENST00000508169 ZBTB24O43167 697 aaPredicted RBP12.09□□□□□ -0.47
COL6A4P1-204ENST00000508169 ATG7O95352 703 aa12.09□□□□□ -0.47
COL6A4P1-204ENST00000508169 ERFEQ4G0M1 354 aa12.09□□□□□ -0.47
COL6A4P1-204ENST00000508169 PHTF2Q8N3S3 785 aa12.09□□□□□ -0.47
COL6A4P1-204ENST00000508169 USTQ9Y2C2 406 aa12.09□□□□□ -0.47
COL6A4P1-204ENST00000508169 C4orf48Q5BLP8 95 aa12.08□□□□□ -0.48
COL6A4P1-204ENST00000508169 ANKLE1Q8NAG6 615 aa12.08□□□□□ -0.48
COL6A4P1-204ENST00000508169 ZBTB7CA1YPR0 619 aa12.07□□□□□ -0.48
COL6A4P1-204ENST00000508169 SH3BP2P78314 561 aa12.07□□□□□ -0.48
COL6A4P1-204ENST00000508169 KANK4Q5T7N3 995 aaPredicted RBP12.07□□□□□ -0.48
COL6A4P1-204ENST00000508169 PLPP7Q8NBV4 271 aa12.07□□□□□ -0.48
COL6A4P1-204ENST00000508169 SLC10A4Q96EP9 437 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms