RNA–Protein interactions for RNA: ENST00000508132.1

CDH6-204, Transcript of cadherin 6, humanhuman

TSL 2

Gene CDH6, Length 678 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-204ENST00000508132 ZNF142P52746 1687 aaPredicted RBP12.19□□□□□ -0.46
CDH6-204ENST00000508132 PTGDRQ13258 359 aa12.19□□□□□ -0.46
CDH6-204ENST00000508132 POTEAQ6S8J7 498 aa12.19□□□□□ -0.46
CDH6-204ENST00000508132 ABCA6Q8N139 1617 aa12.19□□□□□ -0.46
CDH6-204ENST00000508132 MYO3AQ8NEV4 1616 aa12.18□□□□□ -0.46
CDH6-204ENST00000508132 TLL1O43897 1013 aa12.17□□□□□ -0.46
CDH6-204ENST00000508132 LAPTM4AQ15012 233 aa12.16□□□□□ -0.46
CDH6-204ENST00000508132 BLOC1S3Q6QNY0 202 aa12.16□□□□□ -0.46
CDH6-204ENST00000508132 SAMD9Q5K651 1589 aa12.16□□□□□ -0.46
CDH6-204ENST00000508132 KDM5CP41229 1560 aa12.15□□□□□ -0.46
CDH6-204ENST00000508132 REREQ9P2R6 1566 aa12.15□□□□□ -0.46
CDH6-204ENST00000508132 ZPR1O75312 459 aa12.15□□□□□ -0.46
CDH6-204ENST00000508132 TRAF7Q6Q0C0 670 aa12.15□□□□□ -0.46
CDH6-204ENST00000508132 ADGRG1Q9Y653 693 aa12.15□□□□□ -0.46
CDH6-204ENST00000508132 V9GY48 417 aaPredicted RBP12.15□□□□□ -0.46
CDH6-204ENST00000508132 PLA2R1Q13018 1463 aa12.14□□□□□ -0.47
CDH6-204ENST00000508132 NRG2O14511 850 aaPredicted RBP12.14□□□□□ -0.47
CDH6-204ENST00000508132 TOM1O60784 492 aa12.14□□□□□ -0.47
CDH6-204ENST00000508132 EMID1Q96A84 441 aaPredicted RBP12.14□□□□□ -0.47
CDH6-204ENST00000508132 PCDHB3Q9Y5E6 796 aa12.14□□□□□ -0.47
CDH6-204ENST00000508132 NEURL4Q96JN8 1562 aa12.13□□□□□ -0.47
CDH6-204ENST00000508132 CEP170BQ9Y4F5 1589 aaPredicted RBP12.13□□□□□ -0.47
CDH6-204ENST00000508132 MROH2AA6NES4 1674 aa12.13□□□□□ -0.47
CDH6-204ENST00000508132 AGLP35573 1532 aa12.12□□□□□ -0.47
CDH6-204ENST00000508132 NUTM2FA1L443 756 aa12.12□□□□□ -0.47
CDH6-204ENST00000508132 DNAJB2P25686 324 aa12.12□□□□□ -0.47
CDH6-204ENST00000508132 TMEM134Q9H6X4 195 aa12.12□□□□□ -0.47
CDH6-204ENST00000508132 CPS1P31327 1500 aa12.11□□□□□ -0.47
CDH6-204ENST00000508132 STRCP1A6NGW2 1772 aa12.11□□□□□ -0.47
CDH6-204ENST00000508132 VWDEQ8N2E2 1590 aa12.11□□□□□ -0.47
CDH6-204ENST00000508132 SHANK2Q9UPX8 1470 aa12.11□□□□□ -0.47
CDH6-204ENST00000508132 POLR1AO95602 1720 aaPredicted RBP12.11□□□□□ -0.47
CDH6-204ENST00000508132 NPATQ14207 1427 aa12.11□□□□□ -0.47
CDH6-204ENST00000508132 NECTIN2Q92692 538 aa12.1□□□□□ -0.47
CDH6-204ENST00000508132 PLCH2O75038 1416 aa12.1□□□□□ -0.47
CDH6-204ENST00000508132 CEP162Q5TB80 1403 aa12.1□□□□□ -0.47
CDH6-204ENST00000508132 MYO5CQ9NQX4 1742 aa12.09□□□□□ -0.47
CDH6-204ENST00000508132 RCCD1A6NED2 376 aa12.09□□□□□ -0.47
CDH6-204ENST00000508132 SEMA3EO15041 775 aa12.09□□□□□ -0.47
CDH6-204ENST00000508132 AFAP1Q8N556 730 aa12.09□□□□□ -0.47
CDH6-204ENST00000508132 PDZRN3Q9UPQ7 1066 aa12.09□□□□□ -0.47
CDH6-204ENST00000508132 CLTCQ00610 1675 aaKnown RBP12.08□□□□□ -0.48
CDH6-204ENST00000508132 RNF223E7ERA6 249 aa12.08□□□□□ -0.48
CDH6-204ENST00000508132 ZNF518AQ6AHZ1 1483 aa12.08□□□□□ -0.48
CDH6-204ENST00000508132 PLEKHD1A6NEE1 506 aa12.07□□□□□ -0.48
CDH6-204ENST00000508132 PPEF1O14829 653 aaPredicted RBP12.07□□□□□ -0.48
CDH6-204ENST00000508132 RBM46Q8TBY0 533 aaKnown RBP12.07□□□□□ -0.48
CDH6-204ENST00000508132 CDK13Q14004 1512 aaKnown RBP12.06□□□□□ -0.48
CDH6-204ENST00000508132 PTPRKQ15262 1439 aa12.06□□□□□ -0.48
CDH6-204ENST00000508132 CFHP08603 1231 aa12.06□□□□□ -0.48
CDH6-204ENST00000508132 SLC10A3P09131 477 aa12.06□□□□□ -0.48
CDH6-204ENST00000508132 RANGAP1P46060 587 aaPredicted RBP12.06□□□□□ -0.48
CDH6-204ENST00000508132 TRIM67Q6ZTA4 783 aa12.06□□□□□ -0.48
CDH6-204ENST00000508132 DNMT1P26358 1616 aaKnown RBP12.05□□□□□ -0.48
CDH6-204ENST00000508132 GGCXP38435 758 aa12.05□□□□□ -0.48
CDH6-204ENST00000508132 SLC4A3P48751 1232 aa12.05□□□□□ -0.48
CDH6-204ENST00000508132 KIDINS220Q9ULH0 1771 aa12.05□□□□□ -0.48
CDH6-204ENST00000508132 ZMYM3Q14202 1370 aa12.05□□□□□ -0.48
CDH6-204ENST00000508132 CNTLNQ9NXG0 1405 aa12.04□□□□□ -0.48
CDH6-204ENST00000508132 KIF14Q15058 1648 aa12.04□□□□□ -0.48
CDH6-204ENST00000508132 CLIP1P30622 1438 aa12.03□□□□□ -0.48
CDH6-204ENST00000508132 S1PR4O95977 384 aa12.03□□□□□ -0.48
CDH6-204ENST00000508132 TMUB1Q9BVT8 246 aa12.03□□□□□ -0.48
CDH6-204ENST00000508132 PRR14Q9BWN1 585 aa12.03□□□□□ -0.48
CDH6-204ENST00000508132 RNF17Q9BXT8 1623 aaKnown RBP12.03□□□□□ -0.48
CDH6-204ENST00000508132 ACTN4O43707 911 aaKnown RBP12.02□□□□□ -0.49
CDH6-204ENST00000508132 ESF1Q9H501 851 aaKnown RBP12.02□□□□□ -0.49
CDH6-204ENST00000508132 MLH3Q9UHC1 1453 aa12.02□□□□□ -0.49
CDH6-204ENST00000508132 XIRP1Q702N8 1843 aaKnown RBP12.01□□□□□ -0.49
CDH6-204ENST00000508132 LRRC7Q96NW7 1537 aa12.01□□□□□ -0.49
CDH6-204ENST00000508132 FCHSD2O94868 740 aa12□□□□□ -0.49
CDH6-204ENST00000508132 SLC19A1P41440 591 aa11.99□□□□□ -0.49
CDH6-204ENST00000508132 CDC42BPBQ9Y5S2 1711 aa11.99□□□□□ -0.49
CDH6-204ENST00000508132 ITSN2Q9NZM3 1697 aa11.98□□□□□ -0.49
CDH6-204ENST00000508132 FECHP22830 423 aa11.98□□□□□ -0.49
CDH6-204ENST00000508132 KMT5BQ4FZB7 885 aa11.98□□□□□ -0.49
CDH6-204ENST00000508132 RBM26Q5T8P6 1007 aaKnown RBP11.98□□□□□ -0.49
CDH6-204ENST00000508132 EFCAB2Q5VUJ9 269 aa11.98□□□□□ -0.49
CDH6-204ENST00000508132 LIAT1Q6ZQX7 453 aa11.98□□□□□ -0.49
CDH6-204ENST00000508132 PXYLP1Q8TE99 480 aa11.98□□□□□ -0.49
CDH6-204ENST00000508132 A2ML1A8K2U0 1454 aa11.97□□□□□ -0.49
CDH6-204ENST00000508132 ARHGAP5Q13017 1502 aa11.96□□□□□ -0.49
CDH6-204ENST00000508132 PUS10Q3MIT2 529 aaKnown RBP11.96□□□□□ -0.49
CDH6-204ENST00000508132 PLA2G2CQ5R387 149 aa11.96□□□□□ -0.49
CDH6-204ENST00000508132 NLRP7Q8WX94 980 aa11.96□□□□□ -0.49
CDH6-204ENST00000508132 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.95□□□□□ -0.5
CDH6-204ENST00000508132 SPRYD7Q5W111 196 aa11.95□□□□□ -0.5
CDH6-204ENST00000508132 SYNMO15061 1565 aa11.94□□□□□ -0.5
CDH6-204ENST00000508132 ADH1BP00325 375 aa11.94□□□□□ -0.5
CDH6-204ENST00000508132 ANKLE1Q8NAG6 615 aa11.94□□□□□ -0.5
CDH6-204ENST00000508132 ABCC1P33527 1531 aa11.94□□□□□ -0.5
CDH6-204ENST00000508132 METTL3Q86U44 580 aaKnown RBP11.93□□□□□ -0.5
CDH6-204ENST00000508132 IQGAP1P46940 1657 aa11.92□□□□□ -0.5
CDH6-204ENST00000508132 ARHGAP35Q9NRY4 1499 aa11.92□□□□□ -0.5
CDH6-204ENST00000508132 GPR37O15354 613 aa11.92□□□□□ -0.5
CDH6-204ENST00000508132 ZNF787Q6DD87 383 aa11.92□□□□□ -0.5
CDH6-204ENST00000508132 PLXNC1O60486 1568 aa11.91□□□□□ -0.5
CDH6-204ENST00000508132 TESPA1A2RU30 521 aaPredicted RBP11.9□□□□□ -0.5
CDH6-204ENST00000508132 TNFRSF10AO00220 468 aa11.9□□□□□ -0.5
CDH6-204ENST00000508132 ZNF598Q86UK7 904 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms