RNA–Protein interactions for RNA: ENST00000507638.1

VEGFC-201, Transcript of vascular endothelial growth factor C, humanhuman

TSL 3

Gene VEGFC, Length 759 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-201ENST00000507638 ADGRD1Q6QNK2 874 aa9.27□□□□□ -0.93
VEGFC-201ENST00000507638 POTEEQ6S8J3 1075 aa9.27□□□□□ -0.93
VEGFC-201ENST00000507638 ANKRD13DQ6ZTN6 518 aa9.27□□□□□ -0.93
VEGFC-201ENST00000507638 ZBED2Q9BTP6 218 aa9.27□□□□□ -0.93
VEGFC-201ENST00000507638 NBPF3Q9H094 633 aa9.27□□□□□ -0.93
VEGFC-201ENST00000507638 AXIN2Q9Y2T1 843 aa9.27□□□□□ -0.93
VEGFC-201ENST00000507638 KIDINS220Q9ULH0 1771 aa9.27□□□□□ -0.93
VEGFC-201ENST00000507638 TMEM94Q12767 1356 aa9.26□□□□□ -0.93
VEGFC-201ENST00000507638 MYO5CQ9NQX4 1742 aa9.26□□□□□ -0.93
VEGFC-201ENST00000507638 FGD6Q6ZV73 1430 aa9.26□□□□□ -0.93
VEGFC-201ENST00000507638 PROSER2Q86WR7 435 aaPredicted RBP9.26□□□□□ -0.93
VEGFC-201ENST00000507638 ZNF784Q8NCA9 323 aaPredicted RBP9.26□□□□□ -0.93
VEGFC-201ENST00000507638 C8orf37Q96NL8 207 aa9.26□□□□□ -0.93
VEGFC-201ENST00000507638 COL16A1Q07092 1604 aaPredicted RBP9.26□□□□□ -0.93
VEGFC-201ENST00000507638 KDM5DQ9BY66 1539 aa9.26□□□□□ -0.93
VEGFC-201ENST00000507638 FAM135AQ9P2D6 1515 aa9.25□□□□□ -0.93
VEGFC-201ENST00000507638 RABGEF1Q9UJ41 708 aa9.24□□□□□ -0.93
VEGFC-201ENST00000507638 VPS9D1Q9Y2B5 631 aa9.24□□□□□ -0.93
VEGFC-201ENST00000507638 UGGT1Q9NYU2 1555 aa9.24□□□□□ -0.93
VEGFC-201ENST00000507638 LRRC9Q6ZRR7 1453 aa9.23□□□□□ -0.93
VEGFC-201ENST00000507638 FCHSD2O94868 740 aa9.23□□□□□ -0.93
VEGFC-201ENST00000507638 MMRN1Q13201 1228 aa9.23□□□□□ -0.93
VEGFC-201ENST00000507638 DMRTA1Q5VZB9 504 aa9.23□□□□□ -0.93
VEGFC-201ENST00000507638 LAPTM4BQ86VI4 370 aa9.23□□□□□ -0.93
VEGFC-201ENST00000507638 PACS2Q86VP3 889 aa9.23□□□□□ -0.93
VEGFC-201ENST00000507638 ARHGAP5Q13017 1502 aa9.22□□□□□ -0.93
VEGFC-201ENST00000507638 EP400Q96L91 3159 aa9.22□□□□□ -0.93
VEGFC-201ENST00000507638 PRSS12P56730 875 aa9.22□□□□□ -0.93
VEGFC-201ENST00000507638 SPNS2Q8IVW8 549 aa9.22□□□□□ -0.93
VEGFC-201ENST00000507638 BCANQ96GW7 911 aa9.22□□□□□ -0.93
VEGFC-201ENST00000507638 NHSL1Q5SYE7 1610 aa9.22□□□□□ -0.93
VEGFC-201ENST00000507638 SHPRHQ149N8 1683 aa9.22□□□□□ -0.93
VEGFC-201ENST00000507638 ZC3H13Q5T200 1668 aaKnown RBP9.22□□□□□ -0.93
VEGFC-201ENST00000507638 TRIM6-TRIM34B2RNG4 842 aa9.21□□□□□ -0.94
VEGFC-201ENST00000507638 COL9A1P20849 921 aa9.21□□□□□ -0.94
VEGFC-201ENST00000507638 TSR1Q2NL82 804 aaKnown RBP9.21□□□□□ -0.94
VEGFC-201ENST00000507638 NUTM2FA1L443 756 aa9.2□□□□□ -0.94
VEGFC-201ENST00000507638 HRO43593 1189 aa9.2□□□□□ -0.94
VEGFC-201ENST00000507638 LTKP29376 864 aa9.19□□□□□ -0.94
VEGFC-201ENST00000507638 PTGDRQ13258 359 aa9.19□□□□□ -0.94
VEGFC-201ENST00000507638 SF3B2Q13435 895 aaKnown RBP9.19□□□□□ -0.94
VEGFC-201ENST00000507638 HIC1Q14526 733 aa9.19□□□□□ -0.94
VEGFC-201ENST00000507638 MRPL50Q8N5N7 158 aaKnown RBP9.19□□□□□ -0.94
VEGFC-201ENST00000507638 CDCA7LQ96GN5 454 aa9.19□□□□□ -0.94
VEGFC-201ENST00000507638 MIA2Q96PC5 1412 aa9.19□□□□□ -0.94
VEGFC-201ENST00000507638 NWD1Q149M9 1564 aa9.19□□□□□ -0.94
VEGFC-201ENST00000507638 NBPF26B4DH59 902 aa9.18□□□□□ -0.94
VEGFC-201ENST00000507638 SUPT5HO00267 1087 aaKnown RBP9.18□□□□□ -0.94
VEGFC-201ENST00000507638 KCNA6P17658 529 aa9.18□□□□□ -0.94
VEGFC-201ENST00000507638 RANGAP1P46060 587 aaPredicted RBP9.18□□□□□ -0.94
VEGFC-201ENST00000507638 MSH6P52701 1360 aa9.18□□□□□ -0.94
VEGFC-201ENST00000507638 TXNDC2Q86VQ3 553 aa9.18□□□□□ -0.94
VEGFC-201ENST00000507638 ATP7AQ04656 1500 aa9.17□□□□□ -0.94
VEGFC-201ENST00000507638 MAP3K1Q13233 1512 aa9.17□□□□□ -0.94
VEGFC-201ENST00000507638 BLMP54132 1417 aaPredicted RBP9.17□□□□□ -0.94
VEGFC-201ENST00000507638 BHMG1C9JSJ3 638 aaPredicted RBP9.17□□□□□ -0.94
VEGFC-201ENST00000507638 GPIHBP1Q8IV16 184 aa9.17□□□□□ -0.94
VEGFC-201ENST00000507638 TRPC5Q9UL62 973 aaPredicted RBP9.17□□□□□ -0.94
VEGFC-201ENST00000507638 BCL9LQ86UU0 1499 aa9.16□□□□□ -0.94
VEGFC-201ENST00000507638 NLRP1Q9C000 1473 aa9.16□□□□□ -0.94
VEGFC-201ENST00000507638 SPAG9O60271 1321 aaKnown RBP9.16□□□□□ -0.94
VEGFC-201ENST00000507638 GOLGA8CPA6NN73 597 aa9.16□□□□□ -0.94
VEGFC-201ENST00000507638 PRIM1P49642 420 aaKnown RBP9.16□□□□□ -0.94
VEGFC-201ENST00000507638 NPDC1Q9NQX5 325 aaPredicted RBP9.16□□□□□ -0.94
VEGFC-201ENST00000507638 USP21Q9UK80 565 aa9.16□□□□□ -0.94
VEGFC-201ENST00000507638 CEP350Q5VT06 3117 aa9.16□□□□□ -0.94
VEGFC-201ENST00000507638 ADAMTS2O95450 1211 aa9.15□□□□□ -0.94
VEGFC-201ENST00000507638 R3HDM1Q15032 1099 aaKnown RBP9.15□□□□□ -0.94
VEGFC-201ENST00000507638 KIAA1468Q9P260 1216 aa9.15□□□□□ -0.94
VEGFC-201ENST00000507638 SAMD9Q5K651 1589 aa9.15□□□□□ -0.95
VEGFC-201ENST00000507638 CDC42BPBQ9Y5S2 1711 aa9.14□□□□□ -0.95
VEGFC-201ENST00000507638 FAM98CQ17RN3 349 aaKnown RBP9.14□□□□□ -0.95
VEGFC-201ENST00000507638 RBM26Q5T8P6 1007 aaKnown RBP9.14□□□□□ -0.95
VEGFC-201ENST00000507638 TTC13Q8NBP0 860 aa9.14□□□□□ -0.95
VEGFC-201ENST00000507638 CDHR5Q9HBB8 845 aa9.14□□□□□ -0.95
VEGFC-201ENST00000507638 ATP1B4Q9UN42 357 aaPredicted RBP9.14□□□□□ -0.95
VEGFC-201ENST00000507638 A2MP01023 1474 aa9.14□□□□□ -0.95
VEGFC-201ENST00000507638 PROX2Q3B8N5 592 aa9.13□□□□□ -0.95
VEGFC-201ENST00000507638 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.13□□□□□ -0.95
VEGFC-201ENST00000507638 NECTIN2Q92692 538 aa9.13□□□□□ -0.95
VEGFC-201ENST00000507638 RNF166Q96A37 237 aaPredicted RBP9.13□□□□□ -0.95
VEGFC-201ENST00000507638 GNPATO15228 680 aa9.12□□□□□ -0.95
VEGFC-201ENST00000507638 SLC4A3P48751 1232 aa9.12□□□□□ -0.95
VEGFC-201ENST00000507638 HDGFP51858 240 aaKnown RBP9.12□□□□□ -0.95
VEGFC-201ENST00000507638 HNRNPMP52272 730 aaKnown RBP eCLIP9.12□□□□□ -0.95
VEGFC-201ENST00000507638 PZPP20742 1482 aa9.12□□□□□ -0.95
VEGFC-201ENST00000507638 SCAF11Q99590 1463 aaKnown RBP9.12□□□□□ -0.95
VEGFC-201ENST00000507638 KIF14Q15058 1648 aa9.12□□□□□ -0.95
VEGFC-201ENST00000507638 OATP04181 439 aa9.11□□□□□ -0.95
VEGFC-201ENST00000507638 TSKSQ9UJT2 592 aa9.11□□□□□ -0.95
VEGFC-201ENST00000507638 CDK11AQ9UQ88 783 aaPredicted RBP9.11□□□□□ -0.95
VEGFC-201ENST00000507638 EID1Q9Y6B2 187 aa9.11□□□□□ -0.95
VEGFC-201ENST00000507638 AHDC1Q5TGY3 1603 aaPredicted RBP9.11□□□□□ -0.95
VEGFC-201ENST00000507638 DIP2AQ14689 1571 aa9.11□□□□□ -0.95
VEGFC-201ENST00000507638 SAMD9LQ8IVG5 1584 aa9.11□□□□□ -0.95
VEGFC-201ENST00000507638 PRDM15P57071 1507 aaPredicted RBP9.1□□□□□ -0.95
VEGFC-201ENST00000507638 WASHC2CQ9Y4E1 1318 aa9.1□□□□□ -0.95
VEGFC-201ENST00000507638 LMOD2Q6P5Q4 547 aa9.1□□□□□ -0.95
VEGFC-201ENST00000507638 ANKK1Q8NFD2 765 aa9.1□□□□□ -0.95
VEGFC-201ENST00000507638 RBM46Q8TBY0 533 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms