RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 HRCP23327 699 aa13.8□□□□□ -0.2
PFDN1-202ENST00000507185 MYSM1Q5VVJ2 828 aa13.8□□□□□ -0.2
PFDN1-202ENST00000507185 DESI1Q6ICB0 168 aa13.8□□□□□ -0.2
PFDN1-202ENST00000507185 PTCRAQ6ISU1 281 aaPredicted RBP13.8□□□□□ -0.2
PFDN1-202ENST00000507185 RIMBP3CA6NJZ7 1639 aa13.79□□□□□ -0.2
PFDN1-202ENST00000507185 RIMBP3BA6NNM3 1639 aa13.79□□□□□ -0.2
PFDN1-202ENST00000507185 RIMBP3Q9UFD9 1639 aa13.79□□□□□ -0.2
PFDN1-202ENST00000507185 WNT7BP56706 349 aa13.79□□□□□ -0.2
PFDN1-202ENST00000507185 PRPF38BQ5VTL8 546 aaKnown RBP13.79□□□□□ -0.2
PFDN1-202ENST00000507185 RSF1Q96T23 1441 aaPredicted RBP13.79□□□□□ -0.2
PFDN1-202ENST00000507185 ZNF608Q9ULD9 1512 aaPredicted RBP13.79□□□□□ -0.2
PFDN1-202ENST00000507185 MRGPRX2Q96LB1 330 aa13.78□□□□□ -0.2
PFDN1-202ENST00000507185 EVA1BQ9NVM1 165 aa13.78□□□□□ -0.2
PFDN1-202ENST00000507185 TOP2AP11388 1531 aaKnown RBP13.77□□□□□ -0.21
PFDN1-202ENST00000507185 RC3H1Q5TC82 1133 aaKnown RBP13.77□□□□□ -0.21
PFDN1-202ENST00000507185 SNIP1Q8TAD8 396 aaKnown RBP13.77□□□□□ -0.21
PFDN1-202ENST00000507185 CABLES1Q8TDN4 633 aa13.77□□□□□ -0.21
PFDN1-202ENST00000507185 RSPH6AQ9H0K4 717 aa13.77□□□□□ -0.21
PFDN1-202ENST00000507185 LIMD1Q9UGP4 676 aa13.77□□□□□ -0.21
PFDN1-202ENST00000507185 ARHGEF11O15085 1522 aa13.76□□□□□ -0.21
PFDN1-202ENST00000507185 IFT140Q96RY7 1462 aa13.76□□□□□ -0.21
PFDN1-202ENST00000507185 SKOR1P84550 965 aa13.76□□□□□ -0.21
PFDN1-202ENST00000507185 NUTM2BA6NNL0 878 aaPredicted RBP13.75□□□□□ -0.21
PFDN1-202ENST00000507185 NUTM2EB1AL46 878 aaPredicted RBP13.75□□□□□ -0.21
PFDN1-202ENST00000507185 CFAP99D6REC4 459 aa13.75□□□□□ -0.21
PFDN1-202ENST00000507185 NUTM2DQ5VT03 806 aaPredicted RBP13.75□□□□□ -0.21
PFDN1-202ENST00000507185 NUTM2AQ8IVF1 878 aaPredicted RBP13.75□□□□□ -0.21
PFDN1-202ENST00000507185 KCNH2Q12809 1159 aa13.74□□□□□ -0.21
PFDN1-202ENST00000507185 TUSC1Q2TAM9 212 aa13.73□□□□□ -0.21
PFDN1-202ENST00000507185 ZNF787Q6DD87 383 aa13.73□□□□□ -0.21
PFDN1-202ENST00000507185 UNC93B1Q9H1C4 597 aa13.73□□□□□ -0.21
PFDN1-202ENST00000507185 LYPD8Q6UX82 237 aa13.72□□□□□ -0.21
PFDN1-202ENST00000507185 GPBP1L1Q9HC44 474 aaPredicted RBP13.72□□□□□ -0.21
PFDN1-202ENST00000507185 CLK2P49760 499 aaKnown RBP13.71□□□□□ -0.21
PFDN1-202ENST00000507185 QPCTQ16769 361 aa13.71□□□□□ -0.21
PFDN1-202ENST00000507185 TSC1Q92574 1164 aa13.71□□□□□ -0.21
PFDN1-202ENST00000507185 KDM4CQ9H3R0 1056 aa13.71□□□□□ -0.21
PFDN1-202ENST00000507185 POLR3EQ9NVU0 708 aa13.71□□□□□ -0.21
PFDN1-202ENST00000507185 ST8SIA5O15466 376 aa13.7□□□□□ -0.22
PFDN1-202ENST00000507185 CTHP32929 405 aa13.7□□□□□ -0.22
PFDN1-202ENST00000507185 AAASQ9NRG9 546 aa13.7□□□□□ -0.22
PFDN1-202ENST00000507185 AVPP01185 164 aa13.69□□□□□ -0.22
PFDN1-202ENST00000507185 EHBP1Q8NDI1 1231 aa13.69□□□□□ -0.22
PFDN1-202ENST00000507185 J3QL48 77 aa13.68□□□□□ -0.22
PFDN1-202ENST00000507185 LILRB3O75022 631 aa13.68□□□□□ -0.22
PFDN1-202ENST00000507185 SMPD1P17405 629 aa13.68□□□□□ -0.22
PFDN1-202ENST00000507185 SH3BP2P78314 561 aa13.68□□□□□ -0.22
PFDN1-202ENST00000507185 TOPBP1Q92547 1522 aa13.68□□□□□ -0.22
PFDN1-202ENST00000507185 LINC01559Q495D7 138 aa13.67□□□□□ -0.22
PFDN1-202ENST00000507185 BAP1Q92560 729 aa13.67□□□□□ -0.22
PFDN1-202ENST00000507185 CCDC88BA6NC98 1476 aa13.67□□□□□ -0.22
PFDN1-202ENST00000507185 AQRO60306 1485 aaKnown RBP eCLIP13.67□□□□□ -0.22
PFDN1-202ENST00000507185 AXIN1O15169 862 aa13.66□□□□□ -0.22
PFDN1-202ENST00000507185 CTC1Q2NKJ3 1217 aa13.66□□□□□ -0.22
PFDN1-202ENST00000507185 CRIPAKQ8N1N5 446 aa13.66□□□□□ -0.22
PFDN1-202ENST00000507185 DDRGK1Q96HY6 314 aa13.66□□□□□ -0.22
PFDN1-202ENST00000507185 FAM117AQ9C073 453 aa13.65□□□□□ -0.22
PFDN1-202ENST00000507185 ALDH1A1P00352 501 aa13.64□□□□□ -0.23
PFDN1-202ENST00000507185 EIF4G3O43432 1585 aaKnown RBP13.63□□□□□ -0.23
PFDN1-202ENST00000507185 RTL5Q5HYW3 569 aaPredicted RBP13.63□□□□□ -0.23
PFDN1-202ENST00000507185 ZNF511Q8NB15 262 aa13.63□□□□□ -0.23
PFDN1-202ENST00000507185 HELBQ8NG08 1087 aaPredicted RBP13.63□□□□□ -0.23
PFDN1-202ENST00000507185 MAP10Q9P2G4 905 aa13.63□□□□□ -0.23
PFDN1-202ENST00000507185 ATP1B4Q9UN42 357 aaPredicted RBP13.63□□□□□ -0.23
PFDN1-202ENST00000507185 ARAP1Q96P48 1450 aa13.62□□□□□ -0.23
PFDN1-202ENST00000507185 PER1O15534 1290 aaPredicted RBP13.62□□□□□ -0.23
PFDN1-202ENST00000507185 SIAH2O43255 324 aa13.61□□□□□ -0.23
PFDN1-202ENST00000507185 F12P00748 615 aaPredicted RBP13.61□□□□□ -0.23
PFDN1-202ENST00000507185 SMCPP49901 116 aaPredicted RBP13.61□□□□□ -0.23
PFDN1-202ENST00000507185 SKIV2LQ15477 1246 aaKnown RBP13.61□□□□□ -0.23
PFDN1-202ENST00000507185 ABCC8Q09428 1581 aa13.59□□□□□ -0.23
PFDN1-202ENST00000507185 POTECB2RU33 542 aa13.59□□□□□ -0.23
PFDN1-202ENST00000507185 SH3D19Q5HYK7 790 aa13.59□□□□□ -0.23
PFDN1-202ENST00000507185 HPS1Q92902 700 aa13.59□□□□□ -0.23
PFDN1-202ENST00000507185 DACH1Q9UI36 760 aa13.58□□□□□ -0.24
PFDN1-202ENST00000507185 VARSP26640 1264 aaKnown RBP13.57□□□□□ -0.24
PFDN1-202ENST00000507185 CHMP7Q8WUX9 453 aaPredicted RBP13.57□□□□□ -0.24
PFDN1-202ENST00000507185 WASF2Q9Y6W5 498 aa13.57□□□□□ -0.24
PFDN1-202ENST00000507185 DNMBPQ6XZF7 1577 aa13.57□□□□□ -0.24
PFDN1-202ENST00000507185 TDRD9Q8NDG6 1382 aaKnown RBP13.57□□□□□ -0.24
PFDN1-202ENST00000507185 PLEKHG3A1L390 1219 aa13.55□□□□□ -0.24
PFDN1-202ENST00000507185 RAD54L2Q9Y4B4 1467 aa13.55□□□□□ -0.24
PFDN1-202ENST00000507185 PROCA1Q8NCQ7 364 aaPredicted RBP13.54□□□□□ -0.24
PFDN1-202ENST00000507185 POLA1P09884 1462 aaPredicted RBP13.53□□□□□ -0.24
PFDN1-202ENST00000507185 CHD1O14646 1710 aa13.53□□□□□ -0.24
PFDN1-202ENST00000507185 AGERQ15109 404 aa13.52□□□□□ -0.25
PFDN1-202ENST00000507185 NEUROD2Q15784 382 aa13.52□□□□□ -0.25
PFDN1-202ENST00000507185 ARMC2Q8NEN0 867 aa13.52□□□□□ -0.25
PFDN1-202ENST00000507185 FOXJ1Q92949 421 aa13.52□□□□□ -0.25
PFDN1-202ENST00000507185 SOGA1O94964 1423 aa13.52□□□□□ -0.25
PFDN1-202ENST00000507185 PRDM2Q13029 1718 aa13.52□□□□□ -0.25
PFDN1-202ENST00000507185 SNAPC4Q5SXM2 1469 aa13.51□□□□□ -0.25
PFDN1-202ENST00000507185 CTDSPL2Q05D32 466 aa13.51□□□□□ -0.25
PFDN1-202ENST00000507185 FAM174AQ8TBP5 190 aa13.51□□□□□ -0.25
PFDN1-202ENST00000507185 TLL2Q9Y6L7 1015 aa13.51□□□□□ -0.25
PFDN1-202ENST00000507185 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.5□□□□□ -0.25
PFDN1-202ENST00000507185 GMPR2Q9P2T1 348 aaKnown RBP13.5□□□□□ -0.25
PFDN1-202ENST00000507185 ATP13A2Q9NQ11 1180 aa13.49□□□□□ -0.25
PFDN1-202ENST00000507185 C11orf95C9JLR9 678 aaPredicted RBP13.48□□□□□ -0.25
PFDN1-202ENST00000507185 BPHLQ86WA6 291 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms