RNA–Protein interactions for RNA: ENST00000506831.1

CCHCR1-220, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-220ENST00000506831 DEFB132Q7Z7B7 95 aa16.54■□□□□ 0.24
CCHCR1-220ENST00000506831 BTG4Q9NY30 223 aa16.54■□□□□ 0.24
CCHCR1-220ENST00000506831 NGDNQ8NEJ9 315 aaKnown RBP16.53■□□□□ 0.24
CCHCR1-220ENST00000506831 FAM98CQ17RN3 349 aaKnown RBP16.51■□□□□ 0.23
CCHCR1-220ENST00000506831 SPATA31A5Q5VU36 1347 aa16.5■□□□□ 0.23
CCHCR1-220ENST00000506831 SPATA31A7Q8IWB4 1347 aa16.5■□□□□ 0.23
CCHCR1-220ENST00000506831 BAG6P46379 1132 aa16.5■□□□□ 0.23
CCHCR1-220ENST00000506831 ITSN1Q15811 1721 aa16.5■□□□□ 0.23
CCHCR1-220ENST00000506831 CRYBG1Q9Y4K1 1723 aa16.5■□□□□ 0.23
CCHCR1-220ENST00000506831 A0A0G2JS52 829 aa16.49■□□□□ 0.23
CCHCR1-220ENST00000506831 MYT1Q01538 1121 aa16.49■□□□□ 0.23
CCHCR1-220ENST00000506831 ARHGEF28Q8N1W1 1705 aaKnown RBP16.49■□□□□ 0.23
CCHCR1-220ENST00000506831 NUDT16Q96DE0 195 aaKnown RBP16.49■□□□□ 0.23
CCHCR1-220ENST00000506831 PAK3O75914 559 aaPredicted RBP16.48■□□□□ 0.23
CCHCR1-220ENST00000506831 ATP7BP35670 1465 aa16.48■□□□□ 0.23
CCHCR1-220ENST00000506831 PRDM11Q9NQV5 511 aa16.47■□□□□ 0.23
CCHCR1-220ENST00000506831 CDK19Q9BWU1 502 aa16.45■□□□□ 0.22
CCHCR1-220ENST00000506831 CCDC61Q9Y6R9 512 aa16.45■□□□□ 0.22
CCHCR1-220ENST00000506831 POLR3AO14802 1390 aaPredicted RBP16.45■□□□□ 0.22
CCHCR1-220ENST00000506831 KIAA1210Q9ULL0 1709 aa16.45■□□□□ 0.22
CCHCR1-220ENST00000506831 THSD7AQ9UPZ6 1657 aa16.44■□□□□ 0.22
CCHCR1-220ENST00000506831 PLEKHG3A1L390 1219 aa16.44■□□□□ 0.22
CCHCR1-220ENST00000506831 RGPD1P0DJD0 1748 aa16.44■□□□□ 0.22
CCHCR1-220ENST00000506831 LRP5O75197 1615 aa16.44■□□□□ 0.22
CCHCR1-220ENST00000506831 DISP2A7MBM2 1401 aa16.44■□□□□ 0.22
CCHCR1-220ENST00000506831 SPATA31A1Q5TZJ5 1347 aa16.44■□□□□ 0.22
CCHCR1-220ENST00000506831 KIAA0232Q92628 1395 aa16.43■□□□□ 0.22
CCHCR1-220ENST00000506831 NBPF8Q3BBV2 869 aa16.43■□□□□ 0.22
CCHCR1-220ENST00000506831 PCGF6Q9BYE7 350 aa16.42■□□□□ 0.22
CCHCR1-220ENST00000506831 ACEP12821 1306 aa16.42■□□□□ 0.22
CCHCR1-220ENST00000506831 TOPAZ1Q8N9V7 1692 aa16.41■□□□□ 0.22
CCHCR1-220ENST00000506831 PHRF1Q9P1Y6 1649 aaKnown RBP16.41■□□□□ 0.22
CCHCR1-220ENST00000506831 EN1Q05925 392 aaPredicted RBP16.4■□□□□ 0.22
CCHCR1-220ENST00000506831 FAM196AQ6ZSG2 479 aa16.4■□□□□ 0.22
CCHCR1-220ENST00000506831 ZC3H6P61129 1189 aaKnown RBP16.39■□□□□ 0.21
CCHCR1-220ENST00000506831 CHRNA2Q15822 529 aa16.39■□□□□ 0.21
CCHCR1-220ENST00000506831 BARGINQ6ZT62 677 aa16.39■□□□□ 0.21
CCHCR1-220ENST00000506831 BRD4O60885 1362 aaPredicted RBP16.38■□□□□ 0.21
CCHCR1-220ENST00000506831 FAM182BQ5T319 152 aa16.38■□□□□ 0.21
CCHCR1-220ENST00000506831 CPDO75976 1380 aa16.38■□□□□ 0.21
CCHCR1-220ENST00000506831 PSDA5PKW4 1024 aaPredicted RBP16.37■□□□□ 0.21
CCHCR1-220ENST00000506831 EVA1CP58658 441 aa16.37■□□□□ 0.21
CCHCR1-220ENST00000506831 ABTB2Q8N961 1025 aa16.37■□□□□ 0.21
CCHCR1-220ENST00000506831 STRN4Q9NRL3 753 aa16.37■□□□□ 0.21
CCHCR1-220ENST00000506831 USP19O94966 1318 aa16.37■□□□□ 0.21
CCHCR1-220ENST00000506831 SSH2Q76I76 1423 aa16.36■□□□□ 0.21
CCHCR1-220ENST00000506831 TNS1Q9HBL0 1735 aaKnown RBP16.36■□□□□ 0.21
CCHCR1-220ENST00000506831 NBPF1Q3BBV0 1214 aa16.36■□□□□ 0.21
CCHCR1-220ENST00000506831 NUTM2GQ5VZR2 741 aa16.36■□□□□ 0.21
CCHCR1-220ENST00000506831 NLRP13Q86W25 1043 aa16.36■□□□□ 0.21
CCHCR1-220ENST00000506831 PARD3Q8TEW0 1356 aa16.36■□□□□ 0.21
CCHCR1-220ENST00000506831 CAMKK2Q96RR4 588 aa16.35■□□□□ 0.21
CCHCR1-220ENST00000506831 THRAP3Q9Y2W1 955 aaKnown RBP16.35■□□□□ 0.21
CCHCR1-220ENST00000506831 NRKQ7Z2Y5 1582 aa16.34■□□□□ 0.21
CCHCR1-220ENST00000506831 CAMTA1Q9Y6Y1 1673 aa16.34■□□□□ 0.21
CCHCR1-220ENST00000506831 TCP11L2Q8N4U5 519 aa16.34■□□□□ 0.21
CCHCR1-220ENST00000506831 CENPJQ9HC77 1338 aaPredicted RBP16.34■□□□□ 0.21
CCHCR1-220ENST00000506831 TRIM37O94972 964 aa16.33■□□□□ 0.2
CCHCR1-220ENST00000506831 GCP02774 474 aa16.33■□□□□ 0.2
CCHCR1-220ENST00000506831 SRPK2P78362 688 aaKnown RBP16.33■□□□□ 0.2
CCHCR1-220ENST00000506831 PDE3BQ13370 1112 aa16.33■□□□□ 0.2
CCHCR1-220ENST00000506831 EZH2Q15910 746 aaKnown RBP16.33■□□□□ 0.2
CCHCR1-220ENST00000506831 PPIP5K1Q6PFW1 1433 aa16.33■□□□□ 0.2
CCHCR1-220ENST00000506831 LMO7Q8WWI1 1683 aa16.33■□□□□ 0.2
CCHCR1-220ENST00000506831 C11orf95C9JLR9 678 aaPredicted RBP16.32■□□□□ 0.2
CCHCR1-220ENST00000506831 R3HDM1Q15032 1099 aaKnown RBP16.32■□□□□ 0.2
CCHCR1-220ENST00000506831 LARP1Q6PKG0 1096 aaKnown RBP16.32■□□□□ 0.2
CCHCR1-220ENST00000506831 USP35Q9P2H5 1018 aa16.32■□□□□ 0.2
CCHCR1-220ENST00000506831 APBA3O96018 575 aa16.31■□□□□ 0.2
CCHCR1-220ENST00000506831 CABP2Q9NPB3 220 aa16.3■□□□□ 0.2
CCHCR1-220ENST00000506831 COL5A2P05997 1499 aaPredicted RBP16.28■□□□□ 0.2
CCHCR1-220ENST00000506831 USP6P35125 1406 aa16.28■□□□□ 0.2
CCHCR1-220ENST00000506831 CABP1Q9NZU7 370 aa16.27■□□□□ 0.2
CCHCR1-220ENST00000506831 PARP4Q9UKK3 1724 aaKnown RBP16.27■□□□□ 0.19
CCHCR1-220ENST00000506831 CRB1P82279 1406 aa16.27■□□□□ 0.19
CCHCR1-220ENST00000506831 AATKQ6ZMQ8 1374 aa16.26■□□□□ 0.19
CCHCR1-220ENST00000506831 NLRP6P59044 892 aa16.26■□□□□ 0.19
CCHCR1-220ENST00000506831 NBPF14Q5TI25 921 aa16.26■□□□□ 0.19
CCHCR1-220ENST00000506831 QRICH2Q9H0J4 1663 aa16.26■□□□□ 0.19
CCHCR1-220ENST00000506831 RREB1Q92766 1687 aa16.25■□□□□ 0.19
CCHCR1-220ENST00000506831 ZNF692Q9BU19 519 aaPredicted RBP16.25■□□□□ 0.19
CCHCR1-220ENST00000506831 SLIT3O75094 1523 aa16.24■□□□□ 0.19
CCHCR1-220ENST00000506831 EVC2Q86UK5 1308 aa16.24■□□□□ 0.19
CCHCR1-220ENST00000506831 L3MBTL2Q969R5 705 aa16.24■□□□□ 0.19
CCHCR1-220ENST00000506831 NUP188Q5SRE5 1749 aa16.22■□□□□ 0.19
CCHCR1-220ENST00000506831 OVOS2A0A0G2JMS6 1433 aa16.21■□□□□ 0.19
CCHCR1-220ENST00000506831 OVOS2A0A0J9YW53 1432 aa16.21■□□□□ 0.19
CCHCR1-220ENST00000506831 OVOS2Q6IE36 1432 aa16.21■□□□□ 0.19
CCHCR1-220ENST00000506831 PLSCR1O15162 318 aa16.21■□□□□ 0.19
CCHCR1-220ENST00000506831 KCNH5Q8NCM2 988 aa16.21■□□□□ 0.19
CCHCR1-220ENST00000506831 CDCA7Q9BWT1 371 aaPredicted RBP16.21■□□□□ 0.19
CCHCR1-220ENST00000506831 COL18A1P39060 1754 aa16.21■□□□□ 0.18
CCHCR1-220ENST00000506831 DDB1Q16531 1140 aa16.2■□□□□ 0.18
CCHCR1-220ENST00000506831 WDR17Q8IZU2 1322 aa16.19■□□□□ 0.18
CCHCR1-220ENST00000506831 TRPM1Q7Z4N2 1603 aa16.19■□□□□ 0.18
CCHCR1-220ENST00000506831 PEAK1Q9H792 1746 aa16.19■□□□□ 0.18
CCHCR1-220ENST00000506831 PIK3C2AO00443 1686 aa16.19■□□□□ 0.18
CCHCR1-220ENST00000506831 TOM1L2Q6ZVM7 507 aa16.19■□□□□ 0.18
CCHCR1-220ENST00000506831 ARHGEF25Q86VW2 580 aa16.19■□□□□ 0.18
CCHCR1-220ENST00000506831 BCL9O00512 1426 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms