RNA–Protein interactions for RNA: ENST00000506820.1

AFP-203, Transcript of alpha fetoprotein, humanhuman

TSL 2

Gene AFP, Length 476 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-203ENST00000506820 ALDH1A1P00352 501 aa7.74□□□□□ -1.17
AFP-203ENST00000506820 SH3BP2P78314 561 aa7.74□□□□□ -1.17
AFP-203ENST00000506820 SKIV2LQ15477 1246 aaKnown RBP7.74□□□□□ -1.17
AFP-203ENST00000506820 AAASQ9NRG9 546 aa7.74□□□□□ -1.17
AFP-203ENST00000506820 VARSP26640 1264 aaKnown RBP7.73□□□□□ -1.17
AFP-203ENST00000506820 ZNF511Q8NB15 262 aa7.73□□□□□ -1.17
AFP-203ENST00000506820 J3QL48 77 aa7.72□□□□□ -1.17
AFP-203ENST00000506820 SMPD1P17405 629 aa7.72□□□□□ -1.17
AFP-203ENST00000506820 SMCPP49901 116 aaPredicted RBP7.72□□□□□ -1.17
AFP-203ENST00000506820 AGERQ15109 404 aa7.72□□□□□ -1.17
AFP-203ENST00000506820 QPCTQ16769 361 aa7.72□□□□□ -1.17
AFP-203ENST00000506820 LINC01559Q495D7 138 aa7.72□□□□□ -1.17
AFP-203ENST00000506820 GPBP1L1Q9HC44 474 aaPredicted RBP7.72□□□□□ -1.17
AFP-203ENST00000506820 ST8SIA5O15466 376 aa7.71□□□□□ -1.18
AFP-203ENST00000506820 SH3D19Q5HYK7 790 aa7.71□□□□□ -1.18
AFP-203ENST00000506820 FAM174AQ8TBP5 190 aa7.71□□□□□ -1.18
AFP-203ENST00000506820 FAM117AQ9C073 453 aa7.7□□□□□ -1.18
AFP-203ENST00000506820 RTL5Q5HYW3 569 aaPredicted RBP7.69□□□□□ -1.18
AFP-203ENST00000506820 NBPF14Q5TI25 921 aa7.69□□□□□ -1.18
AFP-203ENST00000506820 BPHLQ86WA6 291 aaPredicted RBP7.69□□□□□ -1.18
AFP-203ENST00000506820 MAP10Q9P2G4 905 aa7.69□□□□□ -1.18
AFP-203ENST00000506820 SIAH2O43255 324 aa7.68□□□□□ -1.18
AFP-203ENST00000506820 F12P00748 615 aaPredicted RBP7.68□□□□□ -1.18
AFP-203ENST00000506820 NEUROD2Q15784 382 aa7.68□□□□□ -1.18
AFP-203ENST00000506820 MPNDQ8N594 471 aa7.68□□□□□ -1.18
AFP-203ENST00000506820 PNMA1Q8ND90 353 aa7.68□□□□□ -1.18
AFP-203ENST00000506820 SENP2Q9HC62 589 aa7.68□□□□□ -1.18
AFP-203ENST00000506820 PER1O15534 1290 aaPredicted RBP7.67□□□□□ -1.18
AFP-203ENST00000506820 HPS1Q92902 700 aa7.67□□□□□ -1.18
AFP-203ENST00000506820 NISCHQ9Y2I1 1504 aa7.67□□□□□ -1.18
AFP-203ENST00000506820 C11orf95C9JLR9 678 aaPredicted RBP7.66□□□□□ -1.18
AFP-203ENST00000506820 GPKOWQ92917 476 aaPredicted RBP eCLIP7.66□□□□□ -1.18
AFP-203ENST00000506820 PCMTD1Q96MG8 357 aaPredicted RBP7.66□□□□□ -1.18
AFP-203ENST00000506820 ARID5BQ14865 1188 aa7.65□□□□□ -1.18
AFP-203ENST00000506820 KIFC2Q96AC6 838 aa7.65□□□□□ -1.18
AFP-203ENST00000506820 CAPN5O15484 640 aaPredicted RBP7.64□□□□□ -1.19
AFP-203ENST00000506820 CTDSPL2Q05D32 466 aa7.64□□□□□ -1.19
AFP-203ENST00000506820 GOPCQ9HD26 462 aa7.64□□□□□ -1.19
AFP-203ENST00000506820 ATP13A2Q9NQ11 1180 aa7.64□□□□□ -1.19
AFP-203ENST00000506820 AP1G2O75843 785 aa7.63□□□□□ -1.19
AFP-203ENST00000506820 PPP2R2DQ66LE6 453 aa7.63□□□□□ -1.19
AFP-203ENST00000506820 PROCA1Q8NCQ7 364 aaPredicted RBP7.63□□□□□ -1.19
AFP-203ENST00000506820 FOXJ1Q92949 421 aa7.63□□□□□ -1.19
AFP-203ENST00000506820 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.63□□□□□ -1.19
AFP-203ENST00000506820 GMPR2Q9P2T1 348 aaKnown RBP7.63□□□□□ -1.19
AFP-203ENST00000506820 ADH1CP00326 375 aa7.62□□□□□ -1.19
AFP-203ENST00000506820 NR5A1Q13285 461 aa7.62□□□□□ -1.19
AFP-203ENST00000506820 TLL2Q9Y6L7 1015 aa7.62□□□□□ -1.19
AFP-203ENST00000506820 POTECB2RU33 542 aa7.61□□□□□ -1.19
AFP-203ENST00000506820 NNTQ13423 1086 aa7.61□□□□□ -1.19
AFP-203ENST00000506820 TPRNQ4KMQ1 711 aa7.61□□□□□ -1.19
AFP-203ENST00000506820 IL27Q8NEV9 243 aa7.61□□□□□ -1.19
AFP-203ENST00000506820 ZNF775Q96BV0 537 aaPredicted RBP7.61□□□□□ -1.19
AFP-203ENST00000506820 CDK15Q96Q40 435 aa7.61□□□□□ -1.19
AFP-203ENST00000506820 DACH1Q9UI36 760 aa7.61□□□□□ -1.19
AFP-203ENST00000506820 ZC3H4Q9UPT8 1303 aaKnown RBP7.6□□□□□ -1.19
AFP-203ENST00000506820 MAGEB6P1A0A0J9YX57 407 aa7.6□□□□□ -1.19
AFP-203ENST00000506820 PDXDC2PQ6P474 469 aa7.6□□□□□ -1.19
AFP-203ENST00000506820 FKBPLQ9UIM3 349 aa7.6□□□□□ -1.19
AFP-203ENST00000506820 TMEM259Q4ZIN3 620 aa7.59□□□□□ -1.19
AFP-203ENST00000506820 ZBTB33Q86T24 672 aa7.59□□□□□ -1.19
AFP-203ENST00000506820 ARHGAP9Q9BRR9 750 aa7.59□□□□□ -1.19
AFP-203ENST00000506820 WDR4P57081 412 aaKnown RBP7.58□□□□□ -1.2
AFP-203ENST00000506820 PTK2Q05397 1052 aa7.58□□□□□ -1.2
AFP-203ENST00000506820 SCARF1Q14162 830 aa7.58□□□□□ -1.2
AFP-203ENST00000506820 VASH1Q7L8A9 365 aaPredicted RBP7.58□□□□□ -1.2
AFP-203ENST00000506820 LRRN4Q8WUT4 740 aa7.58□□□□□ -1.2
AFP-203ENST00000506820 TRIM47Q96LD4 638 aa7.58□□□□□ -1.2
AFP-203ENST00000506820 CDV3Q9UKY7 258 aaKnown RBP7.58□□□□□ -1.2
AFP-203ENST00000506820 UPP2O95045 317 aa7.57□□□□□ -1.2
AFP-203ENST00000506820 RFC5P40937 340 aa7.57□□□□□ -1.2
AFP-203ENST00000506820 CARD14Q9BXL6 1004 aa7.57□□□□□ -1.2
AFP-203ENST00000506820 NR6A1Q15406 480 aa7.56□□□□□ -1.2
AFP-203ENST00000506820 SH3BP5LQ7L8J4 393 aa7.56□□□□□ -1.2
AFP-203ENST00000506820 SH3RF1Q7Z6J0 888 aa7.56□□□□□ -1.2
AFP-203ENST00000506820 TRMT44Q8IYL2 757 aaKnown RBP7.56□□□□□ -1.2
AFP-203ENST00000506820 TRIM52Q96A61 297 aa7.56□□□□□ -1.2
AFP-203ENST00000506820 GPSM3Q9Y4H4 160 aa7.56□□□□□ -1.2
AFP-203ENST00000506820 MAP4K5Q9Y4K4 846 aa7.56□□□□□ -1.2
AFP-203ENST00000506820 C4orf48Q5BLP8 95 aa7.55□□□□□ -1.2
AFP-203ENST00000506820 SLC10A4Q96EP9 437 aa7.55□□□□□ -1.2
AFP-203ENST00000506820 C1QTNF2Q9BXJ5 285 aa7.55□□□□□ -1.2
AFP-203ENST00000506820 ZIC2O95409 532 aaPredicted RBP7.54□□□□□ -1.2
AFP-203ENST00000506820 USP17L8P0C7I0 530 aa7.54□□□□□ -1.2
AFP-203ENST00000506820 BRPF1P55201 1214 aaPredicted RBP7.54□□□□□ -1.2
AFP-203ENST00000506820 EMILIN1Q9Y6C2 1016 aa7.54□□□□□ -1.2
AFP-203ENST00000506820 TIMP2P16035 220 aa7.53□□□□□ -1.2
AFP-203ENST00000506820 GRM5P41594 1212 aa7.53□□□□□ -1.2
AFP-203ENST00000506820 DHX9Q08211 1270 aaKnown RBP7.53□□□□□ -1.2
AFP-203ENST00000506820 MRPL14Q6P1L8 145 aaKnown RBP7.53□□□□□ -1.2
AFP-203ENST00000506820 APBB1O00213 710 aa7.52□□□□□ -1.21
AFP-203ENST00000506820 BMP1P13497 986 aa7.52□□□□□ -1.21
AFP-203ENST00000506820 SNRPBP14678 240 aaKnown RBP7.52□□□□□ -1.21
AFP-203ENST00000506820 FSHRP23945 695 aa7.52□□□□□ -1.21
AFP-203ENST00000506820 ERFEQ4G0M1 354 aa7.52□□□□□ -1.21
AFP-203ENST00000506820 TREML4Q6UXN2 200 aa7.52□□□□□ -1.21
AFP-203ENST00000506820 CCDC116Q8IYX3 515 aa7.52□□□□□ -1.21
AFP-203ENST00000506820 PGPEP1Q9NXJ5 209 aa7.52□□□□□ -1.21
AFP-203ENST00000506820 SLC16A10Q8TF71 515 aa7.51□□□□□ -1.21
AFP-203ENST00000506820 WFS1O76024 890 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms