RNA–Protein interactions for RNA: ENST00000506691.1

SNCA-210, Transcript of synuclein alpha, humanhuman

TSL 5

Gene SNCA, Length 387 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-210ENST00000506691 CRYBG1Q9Y4K1 1723 aa15.48■□□□□ 0.07
SNCA-210ENST00000506691 TULP4Q9NRJ4 1543 aa15.48■□□□□ 0.07
SNCA-210ENST00000506691 CABLES1Q8TDN4 633 aa15.47■□□□□ 0.07
SNCA-210ENST00000506691 PRAM1Q96QH2 718 aa15.47■□□□□ 0.07
SNCA-210ENST00000506691 CCDC9Q9Y3X0 531 aaKnown RBP15.47■□□□□ 0.07
SNCA-210ENST00000506691 SPATA31A5Q5VU36 1347 aa15.46■□□□□ 0.07
SNCA-210ENST00000506691 SPATA31A7Q8IWB4 1347 aa15.46■□□□□ 0.07
SNCA-210ENST00000506691 TNS1Q9HBL0 1735 aaKnown RBP15.46■□□□□ 0.06
SNCA-210ENST00000506691 BTG4Q9NY30 223 aa15.45■□□□□ 0.06
SNCA-210ENST00000506691 CFAP70Q5T0N1 1121 aa15.44■□□□□ 0.06
SNCA-210ENST00000506691 ITSN1Q15811 1721 aa15.43■□□□□ 0.06
SNCA-210ENST00000506691 FAM98CQ17RN3 349 aaKnown RBP15.43■□□□□ 0.06
SNCA-210ENST00000506691 POGKQ9P215 609 aa15.43■□□□□ 0.06
SNCA-210ENST00000506691 ATP7BP35670 1465 aa15.43■□□□□ 0.06
SNCA-210ENST00000506691 C11orf95C9JLR9 678 aaPredicted RBP15.42■□□□□ 0.06
SNCA-210ENST00000506691 KIAA1210Q9ULL0 1709 aa15.41■□□□□ 0.06
SNCA-210ENST00000506691 LMOD2Q6P5Q4 547 aa15.41■□□□□ 0.06
SNCA-210ENST00000506691 FAM196AQ6ZSG2 479 aa15.41■□□□□ 0.06
SNCA-210ENST00000506691 ZEB1P37275 1124 aaPredicted RBP15.4■□□□□ 0.06
SNCA-210ENST00000506691 PMFBP1Q8TBY8 1022 aa15.4■□□□□ 0.06
SNCA-210ENST00000506691 SPATA31A1Q5TZJ5 1347 aa15.4■□□□□ 0.06
SNCA-210ENST00000506691 A0A0G2JS52 829 aa15.39■□□□□ 0.05
SNCA-210ENST00000506691 WASLO00401 505 aaPredicted RBP15.39■□□□□ 0.05
SNCA-210ENST00000506691 MYT1Q01538 1121 aa15.39■□□□□ 0.05
SNCA-210ENST00000506691 EN1Q05925 392 aaPredicted RBP15.39■□□□□ 0.05
SNCA-210ENST00000506691 BARGINQ6ZT62 677 aa15.38■□□□□ 0.05
SNCA-210ENST00000506691 CAMKK2Q96RR4 588 aa15.38■□□□□ 0.05
SNCA-210ENST00000506691 PRDM11Q9NQV5 511 aa15.38■□□□□ 0.05
SNCA-210ENST00000506691 PRR36Q9H6K5 1346 aa15.38■□□□□ 0.05
SNCA-210ENST00000506691 PHRF1Q9P1Y6 1649 aaKnown RBP15.37■□□□□ 0.05
SNCA-210ENST00000506691 PSDA5PKW4 1024 aaPredicted RBP15.37■□□□□ 0.05
SNCA-210ENST00000506691 NBPF8Q3BBV2 869 aa15.37■□□□□ 0.05
SNCA-210ENST00000506691 RREB1Q92766 1687 aa15.37■□□□□ 0.05
SNCA-210ENST00000506691 POLR3AO14802 1390 aaPredicted RBP15.36■□□□□ 0.05
SNCA-210ENST00000506691 BRD4O60885 1362 aaPredicted RBP15.36■□□□□ 0.05
SNCA-210ENST00000506691 CPDO75976 1380 aa15.36■□□□□ 0.05
SNCA-210ENST00000506691 NGDNQ8NEJ9 315 aaKnown RBP15.35■□□□□ 0.05
SNCA-210ENST00000506691 THRAP3Q9Y2W1 955 aaKnown RBP15.35■□□□□ 0.05
SNCA-210ENST00000506691 RGPD3A6NKT7 1758 aaPredicted RBP15.34■□□□□ 0.05
SNCA-210ENST00000506691 RGPD4Q7Z3J3 1758 aa15.34■□□□□ 0.05
SNCA-210ENST00000506691 SLC24A1O60721 1099 aa15.34■□□□□ 0.05
SNCA-210ENST00000506691 SAFB2Q14151 953 aaKnown RBP eCLIP15.34■□□□□ 0.05
SNCA-210ENST00000506691 R3HDM1Q15032 1099 aaKnown RBP15.34■□□□□ 0.05
SNCA-210ENST00000506691 ROCK2O75116 1388 aaKnown RBP15.34■□□□□ 0.05
SNCA-210ENST00000506691 ARHGEF28Q8N1W1 1705 aaKnown RBP15.34■□□□□ 0.05
SNCA-210ENST00000506691 NBPF1Q3BBV0 1214 aa15.33■□□□□ 0.04
SNCA-210ENST00000506691 KIAA0232Q92628 1395 aa15.33■□□□□ 0.04
SNCA-210ENST00000506691 TOPAZ1Q8N9V7 1692 aa15.32■□□□□ 0.04
SNCA-210ENST00000506691 EZH2Q15910 746 aaKnown RBP15.32■□□□□ 0.04
SNCA-210ENST00000506691 TRAK1Q9UPV9 953 aa15.32■□□□□ 0.04
SNCA-210ENST00000506691 SSH2Q76I76 1423 aa15.32■□□□□ 0.04
SNCA-210ENST00000506691 TRPM1Q7Z4N2 1603 aa15.32■□□□□ 0.04
SNCA-210ENST00000506691 LMO7Q8WWI1 1683 aa15.32■□□□□ 0.04
SNCA-210ENST00000506691 CARD11Q9BXL7 1154 aa15.31■□□□□ 0.04
SNCA-210ENST00000506691 MINK1Q8N4C8 1332 aaPredicted RBP15.31■□□□□ 0.04
SNCA-210ENST00000506691 NUP188Q5SRE5 1749 aa15.31■□□□□ 0.04
SNCA-210ENST00000506691 PARP4Q9UKK3 1724 aaKnown RBP15.31■□□□□ 0.04
SNCA-210ENST00000506691 PLEKHG3A1L390 1219 aa15.3■□□□□ 0.04
SNCA-210ENST00000506691 NBPF14Q5TI25 921 aa15.3■□□□□ 0.04
SNCA-210ENST00000506691 NUDT16Q96DE0 195 aaKnown RBP15.3■□□□□ 0.04
SNCA-210ENST00000506691 NINLQ9Y2I6 1382 aa15.3■□□□□ 0.04
SNCA-210ENST00000506691 NRKQ7Z2Y5 1582 aa15.29■□□□□ 0.04
SNCA-210ENST00000506691 PAK3O75914 559 aaPredicted RBP15.29■□□□□ 0.04
SNCA-210ENST00000506691 HIRIP3Q9BW71 556 aaPredicted RBP15.29■□□□□ 0.04
SNCA-210ENST00000506691 CCDC61Q9Y6R9 512 aa15.29■□□□□ 0.04
SNCA-210ENST00000506691 USP19O94966 1318 aa15.28■□□□□ 0.04
SNCA-210ENST00000506691 TRIM37O94972 964 aa15.28■□□□□ 0.04
SNCA-210ENST00000506691 APBA3O96018 575 aa15.28■□□□□ 0.04
SNCA-210ENST00000506691 PDE3BQ13370 1112 aa15.28■□□□□ 0.04
SNCA-210ENST00000506691 TCP11L2Q8N4U5 519 aa15.27■□□□□ 0.04
SNCA-210ENST00000506691 CAMTA1Q9Y6Y1 1673 aa15.27■□□□□ 0.03
SNCA-210ENST00000506691 BCL9O00512 1426 aa15.26■□□□□ 0.03
SNCA-210ENST00000506691 FAM182BQ5T319 152 aa15.26■□□□□ 0.03
SNCA-210ENST00000506691 PLSCR1O15162 318 aa15.25■□□□□ 0.03
SNCA-210ENST00000506691 PLEKHG5O94827 1062 aa15.25■□□□□ 0.03
SNCA-210ENST00000506691 EVA1CP58658 441 aa15.25■□□□□ 0.03
SNCA-210ENST00000506691 SPON1Q9HCB6 807 aa15.25■□□□□ 0.03
SNCA-210ENST00000506691 ACEP12821 1306 aa15.24■□□□□ 0.03
SNCA-210ENST00000506691 PEAK1Q9H792 1746 aa15.24■□□□□ 0.03
SNCA-210ENST00000506691 NLRP13Q86W25 1043 aa15.24■□□□□ 0.03
SNCA-210ENST00000506691 OVOS2A0A0G2JMS6 1433 aa15.24■□□□□ 0.03
SNCA-210ENST00000506691 OVOS2A0A0J9YW53 1432 aa15.24■□□□□ 0.03
SNCA-210ENST00000506691 OVOS2Q6IE36 1432 aa15.24■□□□□ 0.03
SNCA-210ENST00000506691 CENPJQ9HC77 1338 aaPredicted RBP15.23■□□□□ 0.03
SNCA-210ENST00000506691 COL5A2P05997 1499 aaPredicted RBP15.23■□□□□ 0.03
SNCA-210ENST00000506691 DCAF8L1A6NGE4 600 aa15.23■□□□□ 0.03
SNCA-210ENST00000506691 CDK19Q9BWU1 502 aa15.23■□□□□ 0.03
SNCA-210ENST00000506691 STRN4Q9NRL3 753 aa15.23■□□□□ 0.03
SNCA-210ENST00000506691 CRB1P82279 1406 aa15.23■□□□□ 0.03
SNCA-210ENST00000506691 CHRNA2Q15822 529 aa15.22■□□□□ 0.03
SNCA-210ENST00000506691 AATKQ6ZMQ8 1374 aa15.22■□□□□ 0.03
SNCA-210ENST00000506691 KCNQ2O43526 872 aa15.21■□□□□ 0.03
SNCA-210ENST00000506691 GCP02774 474 aa15.21■□□□□ 0.03
SNCA-210ENST00000506691 YY1P25490 414 aa15.21■□□□□ 0.03
SNCA-210ENST00000506691 ZC3H6P61129 1189 aaKnown RBP15.21■□□□□ 0.03
SNCA-210ENST00000506691 EIF4G2P78344 907 aaKnown RBP eCLIP15.21■□□□□ 0.03
SNCA-210ENST00000506691 ABTB2Q8N961 1025 aa15.21■□□□□ 0.03
SNCA-210ENST00000506691 CDCA7Q9BWT1 371 aaPredicted RBP15.21■□□□□ 0.03
SNCA-210ENST00000506691 SBNO2Q9Y2G9 1366 aa15.21■□□□□ 0.02
SNCA-210ENST00000506691 LARP1Q6PKG0 1096 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms