RNA–Protein interactions for RNA: ENST00000506441.1

RETREG1-203, Transcript of reticulophagy regulator 1, humanhuman

TSL 2

Gene RETREG1, Length 585 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-203ENST00000506441 NBPF14Q5TI25 921 aa14.24□□□□□ -0.13
RETREG1-203ENST00000506441 ZNF592Q92610 1267 aa14.24□□□□□ -0.13
RETREG1-203ENST00000506441 ZBTB24O43167 697 aaPredicted RBP14.23□□□□□ -0.13
RETREG1-203ENST00000506441 EPS8L1Q8TE68 723 aa14.22□□□□□ -0.13
RETREG1-203ENST00000506441 MAP10Q9P2G4 905 aa14.22□□□□□ -0.13
RETREG1-203ENST00000506441 ZNF777Q9ULD5 760 aaPredicted RBP14.21□□□□□ -0.13
RETREG1-203ENST00000506441 FCF1Q9Y324 198 aaKnown RBP14.2□□□□□ -0.14
RETREG1-203ENST00000506441 SOX11P35716 441 aa14.19□□□□□ -0.14
RETREG1-203ENST00000506441 PTK2Q05397 1052 aa14.19□□□□□ -0.14
RETREG1-203ENST00000506441 CCDC180Q9P1Z9 1646 aa14.19□□□□□ -0.14
RETREG1-203ENST00000506441 GPSM3Q9Y4H4 160 aa14.18□□□□□ -0.14
RETREG1-203ENST00000506441 EIF4G2P78344 907 aaKnown RBP eCLIP14.17□□□□□ -0.14
RETREG1-203ENST00000506441 PDXDC2PQ6P474 469 aa14.17□□□□□ -0.14
RETREG1-203ENST00000506441 ANKLE1Q8NAG6 615 aa14.17□□□□□ -0.14
RETREG1-203ENST00000506441 UNC93B1Q9H1C4 597 aa14.17□□□□□ -0.14
RETREG1-203ENST00000506441 ZBBXA8MT70 800 aa14.16□□□□□ -0.14
RETREG1-203ENST00000506441 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.16□□□□□ -0.14
RETREG1-203ENST00000506441 CCDC97Q96F63 343 aaPredicted RBP14.15□□□□□ -0.14
RETREG1-203ENST00000506441 MCCD1P59942 119 aaPredicted RBP14.14□□□□□ -0.15
RETREG1-203ENST00000506441 NR1H3Q13133 447 aa14.14□□□□□ -0.15
RETREG1-203ENST00000506441 IRF5Q13568 498 aa14.14□□□□□ -0.15
RETREG1-203ENST00000506441 CALR3Q96L12 384 aaKnown RBP14.14□□□□□ -0.15
RETREG1-203ENST00000506441 IFFO2Q5TF58 517 aa14.13□□□□□ -0.15
RETREG1-203ENST00000506441 SERPINA10Q9UK55 444 aa14.13□□□□□ -0.15
RETREG1-203ENST00000506441 ARID3CA6NKF2 412 aa14.12□□□□□ -0.15
RETREG1-203ENST00000506441 SEMA3FQ13275 785 aa14.12□□□□□ -0.15
RETREG1-203ENST00000506441 RNF223E7ERA6 249 aa14.11□□□□□ -0.15
RETREG1-203ENST00000506441 VAC14Q08AM6 782 aa14.11□□□□□ -0.15
RETREG1-203ENST00000506441 PPP1R18Q6NYC8 613 aa14.11□□□□□ -0.15
RETREG1-203ENST00000506441 AGERQ15109 404 aa14.1□□□□□ -0.15
RETREG1-203ENST00000506441 CD2BP2O95400 341 aaKnown RBP14.09□□□□□ -0.15
RETREG1-203ENST00000506441 PTCRAQ6ISU1 281 aaPredicted RBP14.09□□□□□ -0.15
RETREG1-203ENST00000506441 ZBTB33Q86T24 672 aa14.09□□□□□ -0.15
RETREG1-203ENST00000506441 BPHLQ86WA6 291 aaPredicted RBP14.09□□□□□ -0.15
RETREG1-203ENST00000506441 ARHGAP9Q9BRR9 750 aa14.09□□□□□ -0.15
RETREG1-203ENST00000506441 PPEF1O14829 653 aaPredicted RBP14.08□□□□□ -0.16
RETREG1-203ENST00000506441 RPIAP49247 311 aa14.07□□□□□ -0.16
RETREG1-203ENST00000506441 HDGFL1Q5TGJ6 251 aa14.07□□□□□ -0.16
RETREG1-203ENST00000506441 PLSCR2Q9NRY7 297 aa14.07□□□□□ -0.16
RETREG1-203ENST00000506441 BAP1Q92560 729 aa14.06□□□□□ -0.16
RETREG1-203ENST00000506441 FBXO45P0C2W1 286 aa14.05□□□□□ -0.16
RETREG1-203ENST00000506441 GLMNQ92990 594 aa14.05□□□□□ -0.16
RETREG1-203ENST00000506441 GPR37L1O60883 481 aa14.04□□□□□ -0.16
RETREG1-203ENST00000506441 POM121CA8CG34 1229 aa14.03□□□□□ -0.16
RETREG1-203ENST00000506441 ZNF511Q8NB15 262 aa14.03□□□□□ -0.16
RETREG1-203ENST00000506441 PLA2G2EQ9NZK7 142 aa14.03□□□□□ -0.16
RETREG1-203ENST00000506441 WNT7BP56706 349 aa14.02□□□□□ -0.17
RETREG1-203ENST00000506441 ARID3AQ99856 593 aa14.02□□□□□ -0.17
RETREG1-203ENST00000506441 LINC01559Q495D7 138 aa14.01□□□□□ -0.17
RETREG1-203ENST00000506441 CCDC82Q8N4S0 544 aa14.01□□□□□ -0.17
RETREG1-203ENST00000506441 TRIM32Q13049 653 aa14□□□□□ -0.17
RETREG1-203ENST00000506441 SH3BP5LQ7L8J4 393 aa14□□□□□ -0.17
RETREG1-203ENST00000506441 DZIP3Q86Y13 1208 aaKnown RBP14□□□□□ -0.17
RETREG1-203ENST00000506441 ALG2Q9H553 416 aa14□□□□□ -0.17
RETREG1-203ENST00000506441 MAGEB6P1A0A0J9YX57 407 aa13.99□□□□□ -0.17
RETREG1-203ENST00000506441 PCDHB9Q9Y5E1 797 aa13.99□□□□□ -0.17
RETREG1-203ENST00000506441 ADAM32Q8TC27 787 aa13.98□□□□□ -0.17
RETREG1-203ENST00000506441 C1orf115Q9H7X2 142 aa13.98□□□□□ -0.17
RETREG1-203ENST00000506441 CDV3Q9UKY7 258 aaKnown RBP13.98□□□□□ -0.17
RETREG1-203ENST00000506441 CARD14Q9BXL6 1004 aa13.97□□□□□ -0.17
RETREG1-203ENST00000506441 VARSP26640 1264 aaKnown RBP13.96□□□□□ -0.17
RETREG1-203ENST00000506441 SLC19A1P41440 591 aa13.95□□□□□ -0.18
RETREG1-203ENST00000506441 SH3BP2P78314 561 aa13.95□□□□□ -0.18
RETREG1-203ENST00000506441 FAM174AQ8TBP5 190 aa13.95□□□□□ -0.18
RETREG1-203ENST00000506441 TRIM52Q96A61 297 aa13.95□□□□□ -0.18
RETREG1-203ENST00000506441 SLC10A4Q96EP9 437 aa13.95□□□□□ -0.18
RETREG1-203ENST00000506441 SH3RF1Q7Z6J0 888 aa13.94□□□□□ -0.18
RETREG1-203ENST00000506441 FOXJ1Q92949 421 aa13.94□□□□□ -0.18
RETREG1-203ENST00000506441 ARXQ96QS3 562 aa13.94□□□□□ -0.18
RETREG1-203ENST00000506441 SLFNL1Q499Z3 407 aa13.93□□□□□ -0.18
RETREG1-203ENST00000506441 CCDC125Q86Z20 511 aa13.93□□□□□ -0.18
RETREG1-203ENST00000506441 PLA2G2CQ5R387 149 aa13.92□□□□□ -0.18
RETREG1-203ENST00000506441 RNF20Q5VTR2 975 aa13.92□□□□□ -0.18
RETREG1-203ENST00000506441 A0A0G2JS52 829 aa13.91□□□□□ -0.18
RETREG1-203ENST00000506441 NBPF20Q3BBV1 942 aa13.91□□□□□ -0.18
RETREG1-203ENST00000506441 EHBP1Q8NDI1 1231 aa13.91□□□□□ -0.18
RETREG1-203ENST00000506441 CEP126Q9P2H0 1117 aa13.9□□□□□ -0.18
RETREG1-203ENST00000506441 ERFEQ4G0M1 354 aa13.89□□□□□ -0.19
RETREG1-203ENST00000506441 NFATC2IPQ8NCF5 419 aa13.89□□□□□ -0.19
RETREG1-203ENST00000506441 ACIN1Q9UKV3 1341 aaKnown RBP13.89□□□□□ -0.19
RETREG1-203ENST00000506441 LIAT1Q6ZQX7 453 aa13.88□□□□□ -0.19
RETREG1-203ENST00000506441 TRMT44Q8IYL2 757 aaKnown RBP13.88□□□□□ -0.19
RETREG1-203ENST00000506441 ADAMTS19Q8TE59 1207 aa13.88□□□□□ -0.19
RETREG1-203ENST00000506441 RC3H1Q5TC82 1133 aaKnown RBP13.87□□□□□ -0.19
RETREG1-203ENST00000506441 OCSTAMPQ9BR26 566 aa13.87□□□□□ -0.19
RETREG1-203ENST00000506441 PPP1R12CQ9BZL4 782 aa13.87□□□□□ -0.19
RETREG1-203ENST00000506441 LZTS3O60299 673 aaPredicted RBP13.86□□□□□ -0.19
RETREG1-203ENST00000506441 RNF135Q8IUD6 432 aa13.86□□□□□ -0.19
RETREG1-203ENST00000506441 C1QTNF2Q9BXJ5 285 aa13.86□□□□□ -0.19
RETREG1-203ENST00000506441 PPP1R15AO75807 674 aaPredicted RBP13.85□□□□□ -0.19
RETREG1-203ENST00000506441 HOMEZQ8IX15 550 aa13.85□□□□□ -0.19
RETREG1-203ENST00000506441 V9GY48 417 aaPredicted RBP13.85□□□□□ -0.19
RETREG1-203ENST00000506441 SEPT12Q8IYM1 358 aa13.84□□□□□ -0.19
RETREG1-203ENST00000506441 TFIP11Q9UBB9 837 aaKnown RBP13.84□□□□□ -0.19
RETREG1-203ENST00000506441 PALM3A6NDB9 673 aaPredicted RBP13.83□□□□□ -0.2
RETREG1-203ENST00000506441 ATP9BO43861 1147 aa13.83□□□□□ -0.2
RETREG1-203ENST00000506441 SKOR1P84550 965 aa13.83□□□□□ -0.2
RETREG1-203ENST00000506441 MAP7D1Q3KQU3 841 aa13.83□□□□□ -0.2
RETREG1-203ENST00000506441 SPRYD7Q5W111 196 aa13.83□□□□□ -0.2
RETREG1-203ENST00000506441 SKIP12755 728 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms