RNA–Protein interactions for RNA: ENST00000506430.2

AP3S1-204, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5

Gene AP3S1, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-204ENST00000506430 POLR3AO14802 1390 aaPredicted RBP24.81■■□□□ 1.56
AP3S1-204ENST00000506430 ATAD2Q6PL18 1390 aa24.81■■□□□ 1.56
AP3S1-204ENST00000506430 ITSN1Q15811 1721 aa24.81■■□□□ 1.56
AP3S1-204ENST00000506430 GLI3P10071 1580 aa24.81■■□□□ 1.56
AP3S1-204ENST00000506430 NUTM2GQ5VZR2 741 aa24.79■■□□□ 1.56
AP3S1-204ENST00000506430 BTG4Q9NY30 223 aa24.79■■□□□ 1.56
AP3S1-204ENST00000506430 CCDC9Q9Y3X0 531 aaKnown RBP24.79■■□□□ 1.56
AP3S1-204ENST00000506430 EP400Q96L91 3159 aa24.79■■□□□ 1.56
AP3S1-204ENST00000506430 PLCH1Q4KWH8 1693 aa24.78■■□□□ 1.56
AP3S1-204ENST00000506430 TOPAZ1Q8N9V7 1692 aa24.78■■□□□ 1.56
AP3S1-204ENST00000506430 ROCK2O75116 1388 aaKnown RBP24.78■■□□□ 1.56
AP3S1-204ENST00000506430 TRPM1Q7Z4N2 1603 aa24.77■■□□□ 1.56
AP3S1-204ENST00000506430 PPIP5K1Q6PFW1 1433 aa24.76■■□□□ 1.55
AP3S1-204ENST00000506430 NWD2Q9ULI1 1742 aa24.75■■□□□ 1.55
AP3S1-204ENST00000506430 TRIM26Q12899 539 aaPredicted RBP24.75■■□□□ 1.55
AP3S1-204ENST00000506430 SEPT12Q8IYM1 358 aa24.75■■□□□ 1.55
AP3S1-204ENST00000506430 QRICH2Q9H0J4 1663 aa24.75■■□□□ 1.55
AP3S1-204ENST00000506430 ONECUT3O60422 494 aaPredicted RBP24.73■■□□□ 1.55
AP3S1-204ENST00000506430 PRDM11Q9NQV5 511 aa24.73■■□□□ 1.55
AP3S1-204ENST00000506430 CABP1Q9NZU7 370 aa24.73■■□□□ 1.55
AP3S1-204ENST00000506430 CRYBG1Q9Y4K1 1723 aa24.72■■□□□ 1.55
AP3S1-204ENST00000506430 ABTB2Q8N961 1025 aa24.72■■□□□ 1.55
AP3S1-204ENST00000506430 ZC3H6P61129 1189 aaKnown RBP24.71■■□□□ 1.55
AP3S1-204ENST00000506430 COL14A1Q05707 1796 aaKnown RBP24.7■■□□□ 1.55
AP3S1-204ENST00000506430 KIAA0232Q92628 1395 aa24.7■■□□□ 1.55
AP3S1-204ENST00000506430 CHRNA2Q15822 529 aa24.7■■□□□ 1.54
AP3S1-204ENST00000506430 EVC2Q86UK5 1308 aa24.69■■□□□ 1.54
AP3S1-204ENST00000506430 FAM98CQ17RN3 349 aaKnown RBP24.68■■□□□ 1.54
AP3S1-204ENST00000506430 NRAPQ86VF7 1730 aa24.68■■□□□ 1.54
AP3S1-204ENST00000506430 BRWD3Q6RI45 1802 aa24.65■■□□□ 1.54
AP3S1-204ENST00000506430 SPATA31A5Q5VU36 1347 aa24.65■■□□□ 1.54
AP3S1-204ENST00000506430 SPATA31A7Q8IWB4 1347 aa24.65■■□□□ 1.54
AP3S1-204ENST00000506430 A0A0G2JS52 829 aa24.65■■□□□ 1.54
AP3S1-204ENST00000506430 MYT1Q01538 1121 aa24.65■■□□□ 1.54
AP3S1-204ENST00000506430 TONSLQ96HA7 1378 aa24.65■■□□□ 1.54
AP3S1-204ENST00000506430 PHRF1Q9P1Y6 1649 aaKnown RBP24.64■■□□□ 1.54
AP3S1-204ENST00000506430 KRT27Q7Z3Y8 459 aa24.64■■□□□ 1.54
AP3S1-204ENST00000506430 CCDC125Q86Z20 511 aa24.64■■□□□ 1.54
AP3S1-204ENST00000506430 CARD11Q9BXL7 1154 aa24.64■■□□□ 1.54
AP3S1-204ENST00000506430 NLRP13Q86W25 1043 aa24.63■■□□□ 1.53
AP3S1-204ENST00000506430 STRN4Q9NRL3 753 aa24.63■■□□□ 1.53
AP3S1-204ENST00000506430 USP19O94966 1318 aa24.62■■□□□ 1.53
AP3S1-204ENST00000506430 USP6P35125 1406 aa24.62■■□□□ 1.53
AP3S1-204ENST00000506430 GCP02774 474 aa24.61■■□□□ 1.53
AP3S1-204ENST00000506430 BRD4O60885 1362 aaPredicted RBP24.6■■□□□ 1.53
AP3S1-204ENST00000506430 NLRP6P59044 892 aa24.59■■□□□ 1.53
AP3S1-204ENST00000506430 SSH2Q76I76 1423 aa24.59■■□□□ 1.53
AP3S1-204ENST00000506430 NRKQ7Z2Y5 1582 aa24.59■■□□□ 1.53
AP3S1-204ENST00000506430 SPATA31A1Q5TZJ5 1347 aa24.58■■□□□ 1.52
AP3S1-204ENST00000506430 CPDO75976 1380 aa24.57■■□□□ 1.52
AP3S1-204ENST00000506430 EVA1CP58658 441 aa24.57■■□□□ 1.52
AP3S1-204ENST00000506430 BLMP54132 1417 aaPredicted RBP24.57■■□□□ 1.52
AP3S1-204ENST00000506430 FAM182BQ5T319 152 aa24.55■■□□□ 1.52
AP3S1-204ENST00000506430 DEFB132Q7Z7B7 95 aa24.55■■□□□ 1.52
AP3S1-204ENST00000506430 ZNF692Q9BU19 519 aaPredicted RBP24.55■■□□□ 1.52
AP3S1-204ENST00000506430 USP35Q9P2H5 1018 aa24.55■■□□□ 1.52
AP3S1-204ENST00000506430 CAMTA1Q9Y6Y1 1673 aa24.55■■□□□ 1.52
AP3S1-204ENST00000506430 LARP1Q6PKG0 1096 aaKnown RBP24.54■■□□□ 1.52
AP3S1-204ENST00000506430 SBNO2Q9Y2G9 1366 aa24.54■■□□□ 1.52
AP3S1-204ENST00000506430 TTC21BQ7Z4L5 1316 aa24.53■■□□□ 1.52
AP3S1-204ENST00000506430 ZBTB7CA1YPR0 619 aa24.52■■□□□ 1.52
AP3S1-204ENST00000506430 SRCAPQ6ZRS2 3230 aa24.52■■□□□ 1.52
AP3S1-204ENST00000506430 CPSF1Q10570 1443 aaKnown RBP24.51■■□□□ 1.51
AP3S1-204ENST00000506430 SF3B2Q13435 895 aaKnown RBP24.5■■□□□ 1.51
AP3S1-204ENST00000506430 LMO7Q8WWI1 1683 aa24.5■■□□□ 1.51
AP3S1-204ENST00000506430 THSD7AQ9UPZ6 1657 aa24.5■■□□□ 1.51
AP3S1-204ENST00000506430 ZRANB1Q9UGI0 708 aa24.49■■□□□ 1.51
AP3S1-204ENST00000506430 KTN1Q86UP2 1357 aaKnown RBP24.49■■□□□ 1.51
AP3S1-204ENST00000506430 PIK3C2AO00443 1686 aa24.49■■□□□ 1.51
AP3S1-204ENST00000506430 SLIT3O75094 1523 aa24.48■■□□□ 1.51
AP3S1-204ENST00000506430 BARGINQ6ZT62 677 aa24.47■■□□□ 1.51
AP3S1-204ENST00000506430 TMC1Q8TDI8 760 aa24.47■■□□□ 1.51
AP3S1-204ENST00000506430 SOX12O15370 315 aa24.46■■□□□ 1.51
AP3S1-204ENST00000506430 SLC12A5Q9H2X9 1139 aa24.46■■□□□ 1.51
AP3S1-204ENST00000506430 AKAP12Q02952 1782 aa24.45■■□□□ 1.5
AP3S1-204ENST00000506430 TTC21AQ8NDW8 1320 aa24.45■■□□□ 1.5
AP3S1-204ENST00000506430 TCP11L2Q8N4U5 519 aa24.45■■□□□ 1.5
AP3S1-204ENST00000506430 COL5A2P05997 1499 aaPredicted RBP24.45■■□□□ 1.5
AP3S1-204ENST00000506430 AATKQ6ZMQ8 1374 aa24.44■■□□□ 1.5
AP3S1-204ENST00000506430 ST20-MTHFSA0A0A6YYL1 179 aa24.44■■□□□ 1.5
AP3S1-204ENST00000506430 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.44■■□□□ 1.58e-8■□□□□ 10.9
AP3S1-204ENST00000506430 AXIN2Q9Y2T1 843 aa24.44■■□□□ 1.5
AP3S1-204ENST00000506430 CD163L1Q9NR16 1453 aa24.44■■□□□ 1.5
AP3S1-204ENST00000506430 TESK2Q96S53 571 aa24.43■■□□□ 1.5
AP3S1-204ENST00000506430 ARHGEF25Q86VW2 580 aa24.42■■□□□ 1.5
AP3S1-204ENST00000506430 KCNH5Q8NCM2 988 aa24.41■■□□□ 1.5
AP3S1-204ENST00000506430 THRAP3Q9Y2W1 955 aaKnown RBP24.4■■□□□ 1.5
AP3S1-204ENST00000506430 CRB1P82279 1406 aa24.39■■□□□ 1.5
AP3S1-204ENST00000506430 BAG6P46379 1132 aa24.39■■□□□ 1.49
AP3S1-204ENST00000506430 PDE3BQ13370 1112 aa24.39■■□□□ 1.49
AP3S1-204ENST00000506430 NME9Q86XW9 330 aa24.39■■□□□ 1.49
AP3S1-204ENST00000506430 EN1Q05925 392 aaPredicted RBP24.38■■□□□ 1.49
AP3S1-204ENST00000506430 FAM196AQ6ZSG2 479 aa24.38■■□□□ 1.49
AP3S1-204ENST00000506430 HDGFL2Q7Z4V5 671 aaPredicted RBP24.38■■□□□ 1.49
AP3S1-204ENST00000506430 PUS7Q96PZ0 661 aaKnown RBP24.38■■□□□ 1.49
AP3S1-204ENST00000506430 PCGF6Q9BYE7 350 aa24.38■■□□□ 1.49
AP3S1-204ENST00000506430 COL18A1P39060 1754 aa24.37■■□□□ 1.49
AP3S1-204ENST00000506430 TOM1L2Q6ZVM7 507 aa24.37■■□□□ 1.49
AP3S1-204ENST00000506430 MON2Q7Z3U7 1717 aa24.37■■□□□ 1.49
AP3S1-204ENST00000506430 TRIM37O94972 964 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms