RNA–Protein interactions for RNA: ENST00000506223.1

SMAD5-201, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-201ENST00000506223 LRRIQ1Q96JM4 1722 aa10.21□□□□□ -0.77
SMAD5-201ENST00000506223 PREX2Q70Z35 1606 aa10.21□□□□□ -0.78
SMAD5-201ENST00000506223 MS4A1P11836 297 aa10.2□□□□□ -0.78
SMAD5-201ENST00000506223 RNF17Q9BXT8 1623 aaKnown RBP10.2□□□□□ -0.78
SMAD5-201ENST00000506223 SAMD9LQ8IVG5 1584 aa10.19□□□□□ -0.78
SMAD5-201ENST00000506223 TROQ12816 1431 aaPredicted RBP10.19□□□□□ -0.78
SMAD5-201ENST00000506223 ERICH6Q7L0X2 663 aa10.19□□□□□ -0.78
SMAD5-201ENST00000506223 RBM46Q8TBY0 533 aaKnown RBP10.19□□□□□ -0.78
SMAD5-201ENST00000506223 NLRP7Q8WX94 980 aa10.19□□□□□ -0.78
SMAD5-201ENST00000506223 FAM198AQ9UFP1 575 aa10.19□□□□□ -0.78
SMAD5-201ENST00000506223 KCNK17Q96T54 332 aa10.18□□□□□ -0.78
SMAD5-201ENST00000506223 TSKSQ9UJT2 592 aa10.18□□□□□ -0.78
SMAD5-201ENST00000506223 CDC42BPAQ5VT25 1732 aa10.18□□□□□ -0.78
SMAD5-201ENST00000506223 PLXNC1O60486 1568 aa10.18□□□□□ -0.78
SMAD5-201ENST00000506223 LRRC7Q96NW7 1537 aa10.17□□□□□ -0.78
SMAD5-201ENST00000506223 XIRP1Q702N8 1843 aaKnown RBP10.16□□□□□ -0.78
SMAD5-201ENST00000506223 SRCAPQ6ZRS2 3230 aa10.16□□□□□ -0.78
SMAD5-201ENST00000506223 FMN1Q68DA7 1419 aa10.16□□□□□ -0.78
SMAD5-201ENST00000506223 IQGAP1P46940 1657 aa10.15□□□□□ -0.78
SMAD5-201ENST00000506223 SYNMO15061 1565 aa10.15□□□□□ -0.78
SMAD5-201ENST00000506223 TRIM6-TRIM34B2RNG4 842 aa10.15□□□□□ -0.78
SMAD5-201ENST00000506223 SSTR3P32745 418 aaPredicted RBP10.15□□□□□ -0.78
SMAD5-201ENST00000506223 FAM217BQ9NTX9 383 aaPredicted RBP10.15□□□□□ -0.78
SMAD5-201ENST00000506223 DEPDC5O75140 1603 aa10.15□□□□□ -0.79
SMAD5-201ENST00000506223 ERBB3P21860 1342 aa10.14□□□□□ -0.79
SMAD5-201ENST00000506223 GGT6Q6P531 493 aa10.14□□□□□ -0.79
SMAD5-201ENST00000506223 CDK11AQ9UQ88 783 aaPredicted RBP10.14□□□□□ -0.79
SMAD5-201ENST00000506223 NPHP4O75161 1426 aaPredicted RBP10.14□□□□□ -0.79
SMAD5-201ENST00000506223 CLIP1P30622 1438 aa10.14□□□□□ -0.79
SMAD5-201ENST00000506223 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.14□□□□□ -0.79
SMAD5-201ENST00000506223 ATP7AQ04656 1500 aa10.13□□□□□ -0.79
SMAD5-201ENST00000506223 SYCP2Q9BX26 1530 aa10.13□□□□□ -0.79
SMAD5-201ENST00000506223 MED14O60244 1454 aa10.13□□□□□ -0.79
SMAD5-201ENST00000506223 NBPF26B4DH59 902 aa10.13□□□□□ -0.79
SMAD5-201ENST00000506223 C14orf37Q86TY3 774 aa10.13□□□□□ -0.79
SMAD5-201ENST00000506223 PACS2Q86VP3 889 aa10.13□□□□□ -0.79
SMAD5-201ENST00000506223 EYA1Q99502 592 aa10.13□□□□□ -0.79
SMAD5-201ENST00000506223 INO80Q9ULG1 1556 aaPredicted RBP10.13□□□□□ -0.79
SMAD5-201ENST00000506223 A2MP01023 1474 aa10.12□□□□□ -0.79
SMAD5-201ENST00000506223 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.12□□□□□ -0.79
SMAD5-201ENST00000506223 RCCD1A6NED2 376 aa10.12□□□□□ -0.79
SMAD5-201ENST00000506223 ST18O60284 1047 aa10.12□□□□□ -0.79
SMAD5-201ENST00000506223 PROX2Q3B8N5 592 aa10.12□□□□□ -0.79
SMAD5-201ENST00000506223 VARS2Q5ST30 1063 aaKnown RBP10.12□□□□□ -0.79
SMAD5-201ENST00000506223 NUDT18Q6ZVK8 323 aa10.12□□□□□ -0.79
SMAD5-201ENST00000506223 ANKLE2Q86XL3 938 aa10.12□□□□□ -0.79
SMAD5-201ENST00000506223 SPAG9O60271 1321 aaKnown RBP10.11□□□□□ -0.79
SMAD5-201ENST00000506223 C3orf80F5H4A9 247 aa10.11□□□□□ -0.79
SMAD5-201ENST00000506223 FBXO31Q5XUX0 539 aaPredicted RBP10.11□□□□□ -0.79
SMAD5-201ENST00000506223 TATDN2Q93075 761 aa10.11□□□□□ -0.79
SMAD5-201ENST00000506223 BEGAINQ9BUH8 593 aa10.11□□□□□ -0.79
SMAD5-201ENST00000506223 GOPCQ9HD26 462 aa10.11□□□□□ -0.79
SMAD5-201ENST00000506223 TNRQ92752 1358 aa10.11□□□□□ -0.79
SMAD5-201ENST00000506223 ARHGAP35Q9NRY4 1499 aa10.1□□□□□ -0.79
SMAD5-201ENST00000506223 PSEN2P49810 448 aa10.1□□□□□ -0.79
SMAD5-201ENST00000506223 PNMA3Q9UL41 463 aa10.1□□□□□ -0.79
SMAD5-201ENST00000506223 ZC3H13Q5T200 1668 aaKnown RBP10.09□□□□□ -0.79
SMAD5-201ENST00000506223 ADGBQ8N7X0 1667 aa10.09□□□□□ -0.79
SMAD5-201ENST00000506223 ONECUT3O60422 494 aaPredicted RBP10.09□□□□□ -0.79
SMAD5-201ENST00000506223 EMP3P54852 163 aa10.09□□□□□ -0.79
SMAD5-201ENST00000506223 DNAJB2P25686 324 aa10.08□□□□□ -0.8
SMAD5-201ENST00000506223 HNRNPMP52272 730 aaKnown RBP eCLIP10.08□□□□□ -0.83e-6■■■■■ 28.4
SMAD5-201ENST00000506223 MARVELD3Q96A59 401 aa10.08□□□□□ -0.8
SMAD5-201ENST00000506223 ZBED2Q9BTP6 218 aa10.08□□□□□ -0.8
SMAD5-201ENST00000506223 ZNF777Q9ULD5 760 aaPredicted RBP10.08□□□□□ -0.8
SMAD5-201ENST00000506223 UGGT1Q9NYU2 1555 aa10.08□□□□□ -0.8
SMAD5-201ENST00000506223 ROBO1Q9Y6N7 1651 aa10.07□□□□□ -0.8
SMAD5-201ENST00000506223 PZPP20742 1482 aa10.07□□□□□ -0.8
SMAD5-201ENST00000506223 SMAPO00193 183 aa10.07□□□□□ -0.8
SMAD5-201ENST00000506223 ARHGAP33O14559 1287 aa10.07□□□□□ -0.8
SMAD5-201ENST00000506223 SH3D19Q5HYK7 790 aa10.07□□□□□ -0.8
SMAD5-201ENST00000506223 POTEEQ6S8J3 1075 aa10.06□□□□□ -0.8
SMAD5-201ENST00000506223 THEMISQ8N1K5 641 aaPredicted RBP10.06□□□□□ -0.8
SMAD5-201ENST00000506223 PCMTD1Q96MG8 357 aaPredicted RBP10.06□□□□□ -0.8
SMAD5-201ENST00000506223 RSPH6AQ9H0K4 717 aa10.06□□□□□ -0.8
SMAD5-201ENST00000506223 KIAA1468Q9P260 1216 aa10.06□□□□□ -0.8
SMAD5-201ENST00000506223 FAM135AQ9P2D6 1515 aa10.06□□□□□ -0.8
SMAD5-201ENST00000506223 FAM135BQ49AJ0 1406 aa10.06□□□□□ -0.8
SMAD5-201ENST00000506223 TMEM134Q9H6X4 195 aa10.05□□□□□ -0.8
SMAD5-201ENST00000506223 AXIN2Q9Y2T1 843 aa10.05□□□□□ -0.8
SMAD5-201ENST00000506223 NLRP1Q9C000 1473 aa10.04□□□□□ -0.8
SMAD5-201ENST00000506223 FAM205CA6NFA0 338 aa10.04□□□□□ -0.8
SMAD5-201ENST00000506223 PBX2P40425 430 aa10.04□□□□□ -0.8
SMAD5-201ENST00000506223 MIA2Q96PC5 1412 aa10.04□□□□□ -0.8
SMAD5-201ENST00000506223 CCDC18Q5T9S5 1454 aa10.04□□□□□ -0.8
SMAD5-201ENST00000506223 KDM5DQ9BY66 1539 aa10.03□□□□□ -0.8
SMAD5-201ENST00000506223 DMRTA1Q5VZB9 504 aa10.03□□□□□ -0.8
SMAD5-201ENST00000506223 SULF1Q8IWU6 871 aa10.03□□□□□ -0.8
SMAD5-201ENST00000506223 TRIM52Q96A61 297 aa10.03□□□□□ -0.8
SMAD5-201ENST00000506223 SLC4A5Q9BY07 1137 aa10.03□□□□□ -0.8
SMAD5-201ENST00000506223 GPATCH8Q9UKJ3 1502 aaKnown RBP10.02□□□□□ -0.8
SMAD5-201ENST00000506223 PHLPP1O60346 1717 aa10.02□□□□□ -0.8
SMAD5-201ENST00000506223 SKIV2LQ15477 1246 aaKnown RBP10.02□□□□□ -0.81
SMAD5-201ENST00000506223 ZNF687Q8N1G0 1237 aa10.02□□□□□ -0.81
SMAD5-201ENST00000506223 FAM163AQ96GL9 167 aaPredicted RBP10.02□□□□□ -0.81
SMAD5-201ENST00000506223 RABGEF1Q9UJ41 708 aa10.02□□□□□ -0.81
SMAD5-201ENST00000506223 CASKIN1Q8WXD9 1431 aa10.01□□□□□ -0.81
SMAD5-201ENST00000506223 KIAA1107Q9UPP5 1409 aa10.01□□□□□ -0.81
SMAD5-201ENST00000506223 DDX11L8A8MPP1 907 aa10.01□□□□□ -0.81
SMAD5-201ENST00000506223 CD46P15529 392 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms