RNA–Protein interactions for RNA: ENST00000506137.1

HTT-203, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-203ENST00000506137 PAX3P23760 479 aa11.22□□□□□ -0.61
HTT-203ENST00000506137 ZNF662Q6ZS27 426 aa11.22□□□□□ -0.61
HTT-203ENST00000506137 ZNF335Q9H4Z2 1342 aaPredicted RBP11.22□□□□□ -0.61
HTT-203ENST00000506137 ARHGEF10LQ9HCE6 1279 aa11.22□□□□□ -0.61
HTT-203ENST00000506137 CIZ1Q9ULV3 898 aaPredicted RBP11.22□□□□□ -0.61
HTT-203ENST00000506137 U2SURPO15042 1029 aaKnown RBP11.21□□□□□ -0.61
HTT-203ENST00000506137 IBSPP21815 317 aaPredicted RBP11.21□□□□□ -0.61
HTT-203ENST00000506137 MTA1Q13330 715 aa11.21□□□□□ -0.61
HTT-203ENST00000506137 GJC2Q5T442 439 aaPredicted RBP11.21□□□□□ -0.61
HTT-203ENST00000506137 DDX46Q7L014 1031 aaKnown RBP11.21□□□□□ -0.61
HTT-203ENST00000506137 KRI1Q8N9T8 703 aaKnown RBP11.21□□□□□ -0.61
HTT-203ENST00000506137 RBM46Q8TBY0 533 aaKnown RBP11.21□□□□□ -0.61
HTT-203ENST00000506137 IVNS1ABPQ9Y6Y0 642 aa11.21□□□□□ -0.61
HTT-203ENST00000506137 KIAA0556O60303 1618 aa11.2□□□□□ -0.62
HTT-203ENST00000506137 POGZQ7Z3K3 1410 aa11.2□□□□□ -0.62
HTT-203ENST00000506137 IGF1RP08069 1367 aa11.2□□□□□ -0.62
HTT-203ENST00000506137 hCG_2014768A0A024R1R8 64 aa11.2□□□□□ -0.62
HTT-203ENST00000506137 GOLGA6CA6NDK9 693 aa11.2□□□□□ -0.62
HTT-203ENST00000506137 GOLGA6BA6NDN3 693 aa11.2□□□□□ -0.62
HTT-203ENST00000506137 ZNF500O60304 480 aaPredicted RBP11.2□□□□□ -0.62
HTT-203ENST00000506137 GOLGA6DP0CG33 693 aa11.2□□□□□ -0.62
HTT-203ENST00000506137 NBPF10Q6P3W6 841 aaKnown RBP11.2□□□□□ -0.62
HTT-203ENST00000506137 ANKRD23Q86SG2 305 aa11.2□□□□□ -0.62
HTT-203ENST00000506137 LSM14AQ8ND56 463 aaKnown RBP11.2□□□□□ -0.62
HTT-203ENST00000506137 PMM1Q92871 262 aa11.2□□□□□ -0.62
HTT-203ENST00000506137 GNL3LQ9NVN8 582 aaKnown RBP11.2□□□□□ -0.62
HTT-203ENST00000506137 GOLGA6AQ9NYA3 693 aa11.2□□□□□ -0.62
HTT-203ENST00000506137 TOP2AP11388 1531 aaKnown RBP11.19□□□□□ -0.62
HTT-203ENST00000506137 RUSC2Q8N2Y8 1516 aa11.19□□□□□ -0.62
HTT-203ENST00000506137 FHAD1B1AJZ9 1412 aa11.19□□□□□ -0.62
HTT-203ENST00000506137 CD109Q6YHK3 1445 aa11.19□□□□□ -0.62
HTT-203ENST00000506137 DHX16O60231 1041 aaKnown RBP11.19□□□□□ -0.62
HTT-203ENST00000506137 WDHD1O75717 1129 aaPredicted RBP11.19□□□□□ -0.62
HTT-203ENST00000506137 POU5F1Q01860 360 aaKnown RBP11.19□□□□□ -0.62
HTT-203ENST00000506137 NEUROD1Q13562 356 aa11.19□□□□□ -0.62
HTT-203ENST00000506137 MCM6Q14566 821 aa11.19□□□□□ -0.62
HTT-203ENST00000506137 TBC1D10BQ4KMP7 808 aaPredicted RBP11.19□□□□□ -0.62
HTT-203ENST00000506137 PCGF6Q9BYE7 350 aa11.19□□□□□ -0.62
HTT-203ENST00000506137 PRDM4Q9UKN5 801 aa11.19□□□□□ -0.62
HTT-203ENST00000506137 WWC3Q9ULE0 1092 aa11.19□□□□□ -0.62
HTT-203ENST00000506137 FAN1Q9Y2M0 1017 aa11.19□□□□□ -0.62
HTT-203ENST00000506137 C11orf95C9JLR9 678 aaPredicted RBP11.18□□□□□ -0.62
HTT-203ENST00000506137 ZKSCAN8Q15776 578 aaPredicted RBP11.18□□□□□ -0.62
HTT-203ENST00000506137 FAM117AQ9C073 453 aa11.18□□□□□ -0.62
HTT-203ENST00000506137 KLHL42Q9P2K6 505 aa11.18□□□□□ -0.62
HTT-203ENST00000506137 RPGRIP1LQ68CZ1 1315 aa11.17□□□□□ -0.62
HTT-203ENST00000506137 TRIM66O15016 1216 aa11.17□□□□□ -0.62
HTT-203ENST00000506137 SOX12O15370 315 aa11.17□□□□□ -0.62
HTT-203ENST00000506137 STK10O94804 968 aaKnown RBP11.17□□□□□ -0.62
HTT-203ENST00000506137 ZRSR2Q15696 482 aaKnown RBP11.17□□□□□ -0.62
HTT-203ENST00000506137 RAI14Q9P0K7 980 aa11.17□□□□□ -0.62
HTT-203ENST00000506137 ZRANB1Q9UGI0 708 aa11.17□□□□□ -0.62
HTT-203ENST00000506137 FBXO9Q9UK97 447 aaPredicted RBP11.17□□□□□ -0.62
HTT-203ENST00000506137 SYNPO2Q9UMS6 1093 aa11.17□□□□□ -0.62
HTT-203ENST00000506137 SENP3-EIF4A1A0A087X0R7 540 aa11.16□□□□□ -0.62
HTT-203ENST00000506137 BICDL2A1A5D9 508 aa11.16□□□□□ -0.62
HTT-203ENST00000506137 PEX19P40855 299 aa11.16□□□□□ -0.62
HTT-203ENST00000506137 RHBDL3P58872 404 aa11.16□□□□□ -0.62
HTT-203ENST00000506137 PUS10Q3MIT2 529 aaKnown RBP11.16□□□□□ -0.62
HTT-203ENST00000506137 YY1AP1Q9H869 796 aa11.16□□□□□ -0.62
HTT-203ENST00000506137 ZBTB47Q9UFB7 747 aaPredicted RBP11.16□□□□□ -0.62
HTT-203ENST00000506137 TPX2Q9ULW0 747 aaKnown RBP11.16□□□□□ -0.62
HTT-203ENST00000506137 SETBP1Q9Y6X0 1596 aa11.16□□□□□ -0.62
HTT-203ENST00000506137 PARNO95453 639 aaKnown RBP11.15□□□□□ -0.62
HTT-203ENST00000506137 CDCA8Q53HL2 280 aa11.15□□□□□ -0.62
HTT-203ENST00000506137 DPH6Q7L8W6 267 aa11.15□□□□□ -0.62
HTT-203ENST00000506137 BRINP2Q9C0B6 783 aa11.15□□□□□ -0.62
HTT-203ENST00000506137 RBM28Q9NW13 759 aaKnown RBP11.15□□□□□ -0.62
HTT-203ENST00000506137 PTPRGP23470 1445 aa11.15□□□□□ -0.62
HTT-203ENST00000506137 NCOA1Q15788 1441 aa11.15□□□□□ -0.62
HTT-203ENST00000506137 SBNO2Q9Y2G9 1366 aa11.15□□□□□ -0.63
HTT-203ENST00000506137 UHRF1BP1LA0JNW5 1464 aa11.14□□□□□ -0.63
HTT-203ENST00000506137 VDRP11473 427 aa11.14□□□□□ -0.63
HTT-203ENST00000506137 SCP2P22307 547 aa11.14□□□□□ -0.63
HTT-203ENST00000506137 BDNFP23560 247 aa11.14□□□□□ -0.63
HTT-203ENST00000506137 GYS2P54840 703 aa11.14□□□□□ -0.63
HTT-203ENST00000506137 XPCQ01831 940 aaPredicted RBP11.14□□□□□ -0.63
HTT-203ENST00000506137 PTPROQ16827 1216 aa11.14□□□□□ -0.63
HTT-203ENST00000506137 ICE2Q659A1 982 aa11.14□□□□□ -0.63
HTT-203ENST00000506137 GET4Q7L5D6 327 aaPredicted RBP11.14□□□□□ -0.63
HTT-203ENST00000506137 PCGF5Q86SE9 256 aa11.14□□□□□ -0.63
HTT-203ENST00000506137 KCNB2Q92953 911 aa11.14□□□□□ -0.63
HTT-203ENST00000506137 FANCAO15360 1455 aa11.13□□□□□ -0.63
HTT-203ENST00000506137 CBFA2T2O43439 604 aa11.13□□□□□ -0.63
HTT-203ENST00000506137 YY1P25490 414 aa11.13□□□□□ -0.63
HTT-203ENST00000506137 SEMA3FQ13275 785 aa11.13□□□□□ -0.63
HTT-203ENST00000506137 NAALADL2Q58DX5 795 aa11.13□□□□□ -0.63
HTT-203ENST00000506137 TXNDC2Q86VQ3 553 aa11.13□□□□□ -0.63
HTT-203ENST00000506137 ZCRB1Q8TBF4 217 aaKnown RBP11.13□□□□□ -0.63
HTT-203ENST00000506137 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.13□□□□□ -0.63
HTT-203ENST00000506137 ABCA10Q8WWZ4 1543 aa11.13□□□□□ -0.63
HTT-203ENST00000506137 FAM200BP0CF97 657 aa11.12□□□□□ -0.63
HTT-203ENST00000506137 CSB-PGBD3P0DP91 1061 aa11.12□□□□□ -0.63
HTT-203ENST00000506137 PPP4CP60510 307 aa11.12□□□□□ -0.63
HTT-203ENST00000506137 RBM42Q9BTD8 480 aaKnown RBP11.12□□□□□ -0.63
HTT-203ENST00000506137 PTPRKQ15262 1439 aa11.11□□□□□ -0.63
HTT-203ENST00000506137 ARHGEF40Q8TER5 1519 aa11.11□□□□□ -0.63
HTT-203ENST00000506137 PDAP1Q13442 181 aaKnown RBP11.11□□□□□ -0.63
HTT-203ENST00000506137 LARGE2Q8N3Y3 721 aa11.11□□□□□ -0.63
HTT-203ENST00000506137 CHPF2Q9P2E5 772 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms