RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 KRT27Q7Z3Y8 459 aa16.56■□□□□ 0.24
SIL1-208ENST00000505945 DEFB132Q7Z7B7 95 aa16.56■□□□□ 0.24
SIL1-208ENST00000505945 ALS2Q96Q42 1657 aa16.56■□□□□ 0.24
SIL1-208ENST00000505945 FAM98CQ17RN3 349 aaKnown RBP16.55■□□□□ 0.24
SIL1-208ENST00000505945 CDK19Q9BWU1 502 aa16.55■□□□□ 0.24
SIL1-208ENST00000505945 ARHGEF28Q8N1W1 1705 aaKnown RBP16.54■□□□□ 0.24
SIL1-208ENST00000505945 SF3B2Q13435 895 aaKnown RBP16.53■□□□□ 0.24
SIL1-208ENST00000505945 NBPF1Q3BBV0 1214 aa16.53■□□□□ 0.24
SIL1-208ENST00000505945 ATP7BP35670 1465 aa16.53■□□□□ 0.24
SIL1-208ENST00000505945 PRDM11Q9NQV5 511 aa16.52■□□□□ 0.24
SIL1-208ENST00000505945 COL14A1Q05707 1796 aaKnown RBP16.51■□□□□ 0.23
SIL1-208ENST00000505945 NRAPQ86VF7 1730 aa16.51■□□□□ 0.23
SIL1-208ENST00000505945 NUTM2GQ5VZR2 741 aa16.51■□□□□ 0.23
SIL1-208ENST00000505945 SPATA31A5Q5VU36 1347 aa16.5■□□□□ 0.23
SIL1-208ENST00000505945 SPATA31A7Q8IWB4 1347 aa16.5■□□□□ 0.23
SIL1-208ENST00000505945 CHRNA2Q15822 529 aa16.5■□□□□ 0.23
SIL1-208ENST00000505945 NBPF8Q3BBV2 869 aa16.5■□□□□ 0.23
SIL1-208ENST00000505945 CCDC61Q9Y6R9 512 aa16.5■□□□□ 0.23
SIL1-208ENST00000505945 ACEP12821 1306 aa16.49■□□□□ 0.23
SIL1-208ENST00000505945 ZC3H6P61129 1189 aaKnown RBP16.49■□□□□ 0.23
SIL1-208ENST00000505945 ITSN1Q15811 1721 aa16.49■□□□□ 0.23
SIL1-208ENST00000505945 FAM182BQ5T319 152 aa16.49■□□□□ 0.23
SIL1-208ENST00000505945 KIAA0232Q92628 1395 aa16.49■□□□□ 0.23
SIL1-208ENST00000505945 CRYBG1Q9Y4K1 1723 aa16.48■□□□□ 0.23
SIL1-208ENST00000505945 PLEKHG3A1L390 1219 aa16.47■□□□□ 0.23
SIL1-208ENST00000505945 POLR3AO14802 1390 aaPredicted RBP16.47■□□□□ 0.23
SIL1-208ENST00000505945 KIAA1210Q9ULL0 1709 aa16.47■□□□□ 0.23
SIL1-208ENST00000505945 STRN4Q9NRL3 753 aa16.46■□□□□ 0.23
SIL1-208ENST00000505945 SRPK2P78362 688 aaKnown RBP16.45■□□□□ 0.22
SIL1-208ENST00000505945 ABTB2Q8N961 1025 aa16.45■□□□□ 0.22
SIL1-208ENST00000505945 SPATA31A1Q5TZJ5 1347 aa16.45■□□□□ 0.22
SIL1-208ENST00000505945 BAG6P46379 1132 aa16.44■□□□□ 0.22
SIL1-208ENST00000505945 CABP2Q9NPB3 220 aa16.44■□□□□ 0.22
SIL1-208ENST00000505945 CENPJQ9HC77 1338 aaPredicted RBP16.44■□□□□ 0.22
SIL1-208ENST00000505945 TOPAZ1Q8N9V7 1692 aa16.43■□□□□ 0.22
SIL1-208ENST00000505945 PHRF1Q9P1Y6 1649 aaKnown RBP16.42■□□□□ 0.22
SIL1-208ENST00000505945 EVA1CP58658 441 aa16.42■□□□□ 0.22
SIL1-208ENST00000505945 L3MBTL2Q969R5 705 aa16.42■□□□□ 0.22
SIL1-208ENST00000505945 USP35Q9P2H5 1018 aa16.42■□□□□ 0.22
SIL1-208ENST00000505945 EN1Q05925 392 aaPredicted RBP16.41■□□□□ 0.22
SIL1-208ENST00000505945 PPIP5K1Q6PFW1 1433 aa16.41■□□□□ 0.22
SIL1-208ENST00000505945 THSD7AQ9UPZ6 1657 aa16.4■□□□□ 0.22
SIL1-208ENST00000505945 PSDA5PKW4 1024 aaPredicted RBP16.4■□□□□ 0.22
SIL1-208ENST00000505945 NLRP13Q86W25 1043 aa16.39■□□□□ 0.21
SIL1-208ENST00000505945 SIN3AQ96ST3 1273 aa16.39■□□□□ 0.21
SIL1-208ENST00000505945 CABP1Q9NZU7 370 aa16.39■□□□□ 0.21
SIL1-208ENST00000505945 CAMTA1Q9Y6Y1 1673 aa16.38■□□□□ 0.21
SIL1-208ENST00000505945 GCP02774 474 aa16.38■□□□□ 0.21
SIL1-208ENST00000505945 LARP1Q6PKG0 1096 aaKnown RBP16.38■□□□□ 0.21
SIL1-208ENST00000505945 USP19O94966 1318 aa16.38■□□□□ 0.21
SIL1-208ENST00000505945 SSH2Q76I76 1423 aa16.37■□□□□ 0.21
SIL1-208ENST00000505945 TRIM37O94972 964 aa16.37■□□□□ 0.21
SIL1-208ENST00000505945 NRKQ7Z2Y5 1582 aa16.36■□□□□ 0.21
SIL1-208ENST00000505945 NEUROD1Q13562 356 aa16.36■□□□□ 0.21
SIL1-208ENST00000505945 FAM196AQ6ZSG2 479 aa16.36■□□□□ 0.21
SIL1-208ENST00000505945 BARGINQ6ZT62 677 aa16.36■□□□□ 0.21
SIL1-208ENST00000505945 CPDO75976 1380 aa16.36■□□□□ 0.21
SIL1-208ENST00000505945 RGPD1P0DJD0 1748 aa16.36■□□□□ 0.21
SIL1-208ENST00000505945 QRICH2Q9H0J4 1663 aa16.35■□□□□ 0.21
SIL1-208ENST00000505945 PDE3BQ13370 1112 aa16.35■□□□□ 0.21
SIL1-208ENST00000505945 EZH2Q15910 746 aaKnown RBP16.35■□□□□ 0.21
SIL1-208ENST00000505945 ZBTB7CA1YPR0 619 aa16.34■□□□□ 0.21
SIL1-208ENST00000505945 NLRP6P59044 892 aa16.34■□□□□ 0.21
SIL1-208ENST00000505945 TCP11L2Q8N4U5 519 aa16.34■□□□□ 0.21
SIL1-208ENST00000505945 EVC2Q86UK5 1308 aa16.33■□□□□ 0.2
SIL1-208ENST00000505945 USP6P35125 1406 aa16.33■□□□□ 0.2
SIL1-208ENST00000505945 LMO7Q8WWI1 1683 aa16.33■□□□□ 0.2
SIL1-208ENST00000505945 DISP2A7MBM2 1401 aa16.32■□□□□ 0.2
SIL1-208ENST00000505945 BRD4O60885 1362 aaPredicted RBP16.32■□□□□ 0.2
SIL1-208ENST00000505945 APBA3O96018 575 aa16.32■□□□□ 0.2
SIL1-208ENST00000505945 R3HDM1Q15032 1099 aaKnown RBP16.32■□□□□ 0.2
SIL1-208ENST00000505945 CAMKK2Q96RR4 588 aa16.32■□□□□ 0.2
SIL1-208ENST00000505945 TNS1Q9HBL0 1735 aaKnown RBP16.31■□□□□ 0.2
SIL1-208ENST00000505945 ROCK2O75116 1388 aaKnown RBP16.3■□□□□ 0.2
SIL1-208ENST00000505945 THRAP3Q9Y2W1 955 aaKnown RBP16.3■□□□□ 0.2
SIL1-208ENST00000505945 TRPM1Q7Z4N2 1603 aa16.3■□□□□ 0.2
SIL1-208ENST00000505945 COL5A2P05997 1499 aaPredicted RBP16.29■□□□□ 0.2
SIL1-208ENST00000505945 LRP5O75197 1615 aa16.28■□□□□ 0.2
SIL1-208ENST00000505945 AATKQ6ZMQ8 1374 aa16.27■□□□□ 0.2
SIL1-208ENST00000505945 ZNF692Q9BU19 519 aaPredicted RBP16.27■□□□□ 0.2
SIL1-208ENST00000505945 CRB1P82279 1406 aa16.27■□□□□ 0.19
SIL1-208ENST00000505945 TTC21BQ7Z4L5 1316 aa16.26■□□□□ 0.19
SIL1-208ENST00000505945 SLIT3O75094 1523 aa16.26■□□□□ 0.19
SIL1-208ENST00000505945 AXIN2Q9Y2T1 843 aa16.26■□□□□ 0.19
SIL1-208ENST00000505945 PIK3C2AO00443 1686 aa16.25■□□□□ 0.19
SIL1-208ENST00000505945 SOX12O15370 315 aa16.25■□□□□ 0.19
SIL1-208ENST00000505945 TOM1L2Q6ZVM7 507 aa16.25■□□□□ 0.19
SIL1-208ENST00000505945 PARD3Q8TEW0 1356 aa16.24■□□□□ 0.19
SIL1-208ENST00000505945 ARHGEF25Q86VW2 580 aa16.23■□□□□ 0.19
SIL1-208ENST00000505945 KCNH5Q8NCM2 988 aa16.23■□□□□ 0.19
SIL1-208ENST00000505945 PARP4Q9UKK3 1724 aaKnown RBP16.22■□□□□ 0.19
SIL1-208ENST00000505945 DDB1Q16531 1140 aa16.22■□□□□ 0.19
SIL1-208ENST00000505945 COL18A1P39060 1754 aa16.22■□□□□ 0.19
SIL1-208ENST00000505945 WDR17Q8IZU2 1322 aa16.21■□□□□ 0.19
SIL1-208ENST00000505945 TTC21AQ8NDW8 1320 aa16.21■□□□□ 0.19
SIL1-208ENST00000505945 CPSF1Q10570 1443 aaKnown RBP16.21■□□□□ 0.19
SIL1-208ENST00000505945 KTN1Q86UP2 1357 aaKnown RBP16.21■□□□□ 0.19
SIL1-208ENST00000505945 C11orf95C9JLR9 678 aaPredicted RBP16.2■□□□□ 0.18
SIL1-208ENST00000505945 NBPF14Q5TI25 921 aa16.2■□□□□ 0.18
SIL1-208ENST00000505945 CARD11Q9BXL7 1154 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms