RNA–Protein interactions for RNA: ENST00000505944.5

NR1I3-221, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-221ENST00000505944 NRXN1Q9ULB1 1477 aa9.99□□□□□ -0.81
NR1I3-221ENST00000505944 WAPLQ7Z5K2 1190 aa9.99□□□□□ -0.81
NR1I3-221ENST00000505944 STK26Q9P289 416 aa9.99□□□□□ -0.81
NR1I3-221ENST00000505944 PHF8Q9UPP1 1060 aa9.99□□□□□ -0.81
NR1I3-221ENST00000505944 DHX57Q6P158 1386 aaKnown RBP9.99□□□□□ -0.81
NR1I3-221ENST00000505944 NRAPQ86VF7 1730 aa9.99□□□□□ -0.81
NR1I3-221ENST00000505944 ANKARQ7Z5J8 1434 aa9.99□□□□□ -0.81
NR1I3-221ENST00000505944 YTHDC2Q9H6S0 1430 aaKnown RBP9.99□□□□□ -0.81
NR1I3-221ENST00000505944 A0A0G2JS52 829 aa9.98□□□□□ -0.81
NR1I3-221ENST00000505944 MYT1Q01538 1121 aa9.98□□□□□ -0.81
NR1I3-221ENST00000505944 TRPM3Q9HCF6 1732 aaPredicted RBP9.96□□□□□ -0.81
NR1I3-221ENST00000505944 COL14A1Q05707 1796 aaKnown RBP9.96□□□□□ -0.81
NR1I3-221ENST00000505944 C11orf95C9JLR9 678 aaPredicted RBP9.96□□□□□ -0.82
NR1I3-221ENST00000505944 RGL3Q3MIN7 710 aa9.96□□□□□ -0.82
NR1I3-221ENST00000505944 TMEM132EQ6IEE7 984 aa9.96□□□□□ -0.82
NR1I3-221ENST00000505944 PSDA5PKW4 1024 aaPredicted RBP9.95□□□□□ -0.82
NR1I3-221ENST00000505944 FAM196AQ6ZSG2 479 aa9.95□□□□□ -0.82
NR1I3-221ENST00000505944 SIN3AQ96ST3 1273 aa9.95□□□□□ -0.82
NR1I3-221ENST00000505944 GPRASP1Q5JY77 1395 aa9.95□□□□□ -0.82
NR1I3-221ENST00000505944 ALS2Q96Q42 1657 aa9.95□□□□□ -0.82
NR1I3-221ENST00000505944 CRYBG1Q9Y4K1 1723 aa9.94□□□□□ -0.82
NR1I3-221ENST00000505944 FAM83GA6ND36 823 aa9.94□□□□□ -0.82
NR1I3-221ENST00000505944 NEUROD1Q13562 356 aa9.94□□□□□ -0.82
NR1I3-221ENST00000505944 FAM98CQ17RN3 349 aaKnown RBP9.94□□□□□ -0.82
NR1I3-221ENST00000505944 LMOD2Q6P5Q4 547 aa9.94□□□□□ -0.82
NR1I3-221ENST00000505944 BTG4Q9NY30 223 aa9.94□□□□□ -0.82
NR1I3-221ENST00000505944 DLC1Q96QB1 1528 aa9.93□□□□□ -0.82
NR1I3-221ENST00000505944 SPATA31A5Q5VU36 1347 aa9.93□□□□□ -0.82
NR1I3-221ENST00000505944 SPATA31A7Q8IWB4 1347 aa9.93□□□□□ -0.82
NR1I3-221ENST00000505944 EN1Q05925 392 aaPredicted RBP9.93□□□□□ -0.82
NR1I3-221ENST00000505944 NBPF8Q3BBV2 869 aa9.93□□□□□ -0.82
NR1I3-221ENST00000505944 NBPF14Q5TI25 921 aa9.93□□□□□ -0.82
NR1I3-221ENST00000505944 CCER1Q8TC90 406 aaPredicted RBP9.93□□□□□ -0.82
NR1I3-221ENST00000505944 C14orf93Q9H972 538 aaKnown RBP9.93□□□□□ -0.82
NR1I3-221ENST00000505944 THSD7AQ9UPZ6 1657 aa9.93□□□□□ -0.82
NR1I3-221ENST00000505944 R3HDM1Q15032 1099 aaKnown RBP9.92□□□□□ -0.82
NR1I3-221ENST00000505944 CABLES1Q8TDN4 633 aa9.92□□□□□ -0.82
NR1I3-221ENST00000505944 TNS1Q9HBL0 1735 aaKnown RBP9.92□□□□□ -0.82
NR1I3-221ENST00000505944 PLEKHG5O94827 1062 aa9.91□□□□□ -0.82
NR1I3-221ENST00000505944 YY1P25490 414 aa9.91□□□□□ -0.82
NR1I3-221ENST00000505944 ITSN1Q15811 1721 aa9.9□□□□□ -0.82
NR1I3-221ENST00000505944 NINLQ9Y2I6 1382 aa9.9□□□□□ -0.82
NR1I3-221ENST00000505944 CAMKK2Q96RR4 588 aa9.9□□□□□ -0.82
NR1I3-221ENST00000505944 PRDM11Q9NQV5 511 aa9.9□□□□□ -0.82
NR1I3-221ENST00000505944 POGKQ9P215 609 aa9.9□□□□□ -0.82
NR1I3-221ENST00000505944 ADGRB1O14514 1584 aa9.89□□□□□ -0.83
NR1I3-221ENST00000505944 TULP4Q9NRJ4 1543 aa9.89□□□□□ -0.83
NR1I3-221ENST00000505944 ABCB7O75027 752 aa9.89□□□□□ -0.83
NR1I3-221ENST00000505944 SAFB2Q14151 953 aaKnown RBP eCLIP9.89□□□□□ -0.83
NR1I3-221ENST00000505944 CFAP70Q5T0N1 1121 aa9.89□□□□□ -0.83
NR1I3-221ENST00000505944 STAC3Q96MF2 364 aa9.89□□□□□ -0.83
NR1I3-221ENST00000505944 PRAM1Q96QH2 718 aa9.89□□□□□ -0.83
NR1I3-221ENST00000505944 SPATA31A1Q5TZJ5 1347 aa9.88□□□□□ -0.83
NR1I3-221ENST00000505944 ATP7BP35670 1465 aa9.88□□□□□ -0.83
NR1I3-221ENST00000505944 POLA2Q14181 598 aa9.88□□□□□ -0.83
NR1I3-221ENST00000505944 BARGINQ6ZT62 677 aa9.88□□□□□ -0.83
NR1I3-221ENST00000505944 PMFBP1Q8TBY8 1022 aa9.88□□□□□ -0.83
NR1I3-221ENST00000505944 SPON1Q9HCB6 807 aa9.88□□□□□ -0.83
NR1I3-221ENST00000505944 PHRF1Q9P1Y6 1649 aaKnown RBP9.88□□□□□ -0.83
NR1I3-221ENST00000505944 APBA3O96018 575 aa9.87□□□□□ -0.83
NR1I3-221ENST00000505944 PDE3BQ13370 1112 aa9.87□□□□□ -0.83
NR1I3-221ENST00000505944 EZH2Q15910 746 aaKnown RBP9.87□□□□□ -0.83
NR1I3-221ENST00000505944 PPP1R1BQ9UD71 204 aaPredicted RBP9.87□□□□□ -0.83
NR1I3-221ENST00000505944 THRAP3Q9Y2W1 955 aaKnown RBP9.87□□□□□ -0.83
NR1I3-221ENST00000505944 ARHGEF28Q8N1W1 1705 aaKnown RBP9.87□□□□□ -0.83
NR1I3-221ENST00000505944 RREB1Q92766 1687 aa9.87□□□□□ -0.83
NR1I3-221ENST00000505944 TRIM37O94972 964 aa9.86□□□□□ -0.83
NR1I3-221ENST00000505944 NGDNQ8NEJ9 315 aaKnown RBP9.86□□□□□ -0.83
NR1I3-221ENST00000505944 KDM2AQ9Y2K7 1162 aa9.85□□□□□ -0.83
NR1I3-221ENST00000505944 RGPD3A6NKT7 1758 aaPredicted RBP9.85□□□□□ -0.83
NR1I3-221ENST00000505944 RGPD4Q7Z3J3 1758 aa9.85□□□□□ -0.83
NR1I3-221ENST00000505944 PRR36Q9H6K5 1346 aa9.84□□□□□ -0.83
NR1I3-221ENST00000505944 WASLO00401 505 aaPredicted RBP9.84□□□□□ -0.83
NR1I3-221ENST00000505944 KCNQ2O43526 872 aa9.84□□□□□ -0.83
NR1I3-221ENST00000505944 TOPAZ1Q8N9V7 1692 aa9.83□□□□□ -0.84
NR1I3-221ENST00000505944 NUP188Q5SRE5 1749 aa9.83□□□□□ -0.84
NR1I3-221ENST00000505944 PAK3O75914 559 aaPredicted RBP9.83□□□□□ -0.84
NR1I3-221ENST00000505944 EVA1CP58658 441 aa9.83□□□□□ -0.84
NR1I3-221ENST00000505944 TCP11L2Q8N4U5 519 aa9.83□□□□□ -0.84
NR1I3-221ENST00000505944 HIRIP3Q9BW71 556 aaPredicted RBP9.83□□□□□ -0.84
NR1I3-221ENST00000505944 CPDO75976 1380 aa9.83□□□□□ -0.84
NR1I3-221ENST00000505944 KIAA0232Q92628 1395 aa9.83□□□□□ -0.84
NR1I3-221ENST00000505944 MINK1Q8N4C8 1332 aaPredicted RBP9.82□□□□□ -0.84
NR1I3-221ENST00000505944 SSH2Q76I76 1423 aa9.82□□□□□ -0.84
NR1I3-221ENST00000505944 FAM182BQ5T319 152 aa9.82□□□□□ -0.84
NR1I3-221ENST00000505944 TRAK1Q9UPV9 953 aa9.82□□□□□ -0.84
NR1I3-221ENST00000505944 NRKQ7Z2Y5 1582 aa9.81□□□□□ -0.84
NR1I3-221ENST00000505944 BRD4O60885 1362 aaPredicted RBP9.81□□□□□ -0.84
NR1I3-221ENST00000505944 PLSCR1O15162 318 aa9.81□□□□□ -0.84
NR1I3-221ENST00000505944 DCAF11Q8TEB1 546 aa9.81□□□□□ -0.84
NR1I3-221ENST00000505944 L3MBTL2Q969R5 705 aa9.81□□□□□ -0.84
NR1I3-221ENST00000505944 STRN4Q9NRL3 753 aa9.81□□□□□ -0.84
NR1I3-221ENST00000505944 OVOS2A0A0G2JMS6 1433 aa9.81□□□□□ -0.84
NR1I3-221ENST00000505944 OVOS2A0A0J9YW53 1432 aa9.81□□□□□ -0.84
NR1I3-221ENST00000505944 OVOS2Q6IE36 1432 aa9.81□□□□□ -0.84
NR1I3-221ENST00000505944 PARP4Q9UKK3 1724 aaKnown RBP9.8□□□□□ -0.84
NR1I3-221ENST00000505944 LMO7Q8WWI1 1683 aa9.8□□□□□ -0.84
NR1I3-221ENST00000505944 POLR3AO14802 1390 aaPredicted RBP9.79□□□□□ -0.84
NR1I3-221ENST00000505944 TONSLQ96HA7 1378 aa9.79□□□□□ -0.84
NR1I3-221ENST00000505944 NUDT16Q96DE0 195 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms