RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 ATP7BP35670 1465 aa10.74□□□□□ -0.69
COL4A5-208ENST00000505728 ZNF692Q9BU19 519 aaPredicted RBP10.74□□□□□ -0.69
COL4A5-208ENST00000505728 NALCNQ8IZF0 1738 aa10.74□□□□□ -0.69
COL4A5-208ENST00000505728 PTCH1Q13635 1447 aa10.74□□□□□ -0.69
COL4A5-208ENST00000505728 CD163L1Q9NR16 1453 aa10.74□□□□□ -0.69
COL4A5-208ENST00000505728 NHSL1Q5SYE7 1610 aa10.73□□□□□ -0.69
COL4A5-208ENST00000505728 PDE3BQ13370 1112 aa10.73□□□□□ -0.69
COL4A5-208ENST00000505728 C14orf37Q86TY3 774 aa10.73□□□□□ -0.69
COL4A5-208ENST00000505728 ADAMTS8Q9UP79 889 aa10.73□□□□□ -0.69
COL4A5-208ENST00000505728 BLMP54132 1417 aaPredicted RBP10.73□□□□□ -0.69
COL4A5-208ENST00000505728 ADGRB2O60241 1585 aa10.73□□□□□ -0.69
COL4A5-208ENST00000505728 FYB1O15117 783 aa10.72□□□□□ -0.69
COL4A5-208ENST00000505728 CFAP53Q96M91 514 aa10.72□□□□□ -0.69
COL4A5-208ENST00000505728 C19orf44Q9H6X5 657 aa10.72□□□□□ -0.69
COL4A5-208ENST00000505728 PLEKHG3A1L390 1219 aa10.71□□□□□ -0.69
COL4A5-208ENST00000505728 NEFLP07196 543 aa10.71□□□□□ -0.69
COL4A5-208ENST00000505728 CPSF1Q10570 1443 aaKnown RBP10.71□□□□□ -0.69
COL4A5-208ENST00000505728 PPIP5K1Q6PFW1 1433 aa10.71□□□□□ -0.69
COL4A5-208ENST00000505728 SMG6Q86US8 1419 aaKnown RBP10.71□□□□□ -0.69
COL4A5-208ENST00000505728 CADPS2Q86UW7 1296 aa10.71□□□□□ -0.69
COL4A5-208ENST00000505728 NGEFQ8N5V2 710 aa10.71□□□□□ -0.69
COL4A5-208ENST00000505728 NUDCQ9Y266 331 aa10.71□□□□□ -0.69
COL4A5-208ENST00000505728 ANKRD26Q9UPS8 1709 aa10.7□□□□□ -0.7
COL4A5-208ENST00000505728 ATF3P18847 181 aa10.7□□□□□ -0.7
COL4A5-208ENST00000505728 MTHFSP49914 203 aa10.7□□□□□ -0.7
COL4A5-208ENST00000505728 BRINP3Q76B58 766 aa10.7□□□□□ -0.7
COL4A5-208ENST00000505728 DCCP43146 1447 aa10.69□□□□□ -0.7
COL4A5-208ENST00000505728 MST1RQ04912 1400 aa10.69□□□□□ -0.7
COL4A5-208ENST00000505728 EDC4Q6P2E9 1401 aaKnown RBP10.69□□□□□ -0.7
COL4A5-208ENST00000505728 SPATA31A6Q5VVP1 1343 aa10.69□□□□□ -0.7
COL4A5-208ENST00000505728 PRR36Q9H6K5 1346 aa10.69□□□□□ -0.7
COL4A5-208ENST00000505728 GGNBP2Q9H3C7 697 aa10.69□□□□□ -0.7
COL4A5-208ENST00000505728 CDC42BPGQ6DT37 1551 aa10.68□□□□□ -0.7
COL4A5-208ENST00000505728 KIF20BQ96Q89 1820 aa10.68□□□□□ -0.7
COL4A5-208ENST00000505728 TNNT2P45379 298 aaPredicted RBP10.67□□□□□ -0.7
COL4A5-208ENST00000505728 ERICH6BQ5W0A0 696 aa10.67□□□□□ -0.7
COL4A5-208ENST00000505728 SUPT16HQ9Y5B9 1047 aaKnown RBP10.67□□□□□ -0.7
COL4A5-208ENST00000505728 AKAP12Q02952 1782 aa10.67□□□□□ -0.7
COL4A5-208ENST00000505728 ADGRL3Q9HAR2 1447 aa10.67□□□□□ -0.7
COL4A5-208ENST00000505728 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.66□□□□□ -0.7
COL4A5-208ENST00000505728 MON2Q7Z3U7 1717 aa10.65□□□□□ -0.7
COL4A5-208ENST00000505728 FKBP8Q14318 412 aa10.65□□□□□ -0.7
COL4A5-208ENST00000505728 NCBP3Q53F19 620 aaKnown RBP10.65□□□□□ -0.7
COL4A5-208ENST00000505728 MEX3CQ5U5Q3 659 aaKnown RBP10.65□□□□□ -0.7
COL4A5-208ENST00000505728 DDX17Q92841 729 aaKnown RBP10.65□□□□□ -0.7
COL4A5-208ENST00000505728 ANKARQ7Z5J8 1434 aa10.65□□□□□ -0.7
COL4A5-208ENST00000505728 ITSN1Q15811 1721 aa10.64□□□□□ -0.71
COL4A5-208ENST00000505728 ACEP12821 1306 aa10.64□□□□□ -0.71
COL4A5-208ENST00000505728 TOPAZ1Q8N9V7 1692 aa10.64□□□□□ -0.71
COL4A5-208ENST00000505728 NUTM2BA6NNL0 878 aaPredicted RBP10.64□□□□□ -0.71
COL4A5-208ENST00000505728 NUTM2EB1AL46 878 aaPredicted RBP10.64□□□□□ -0.71
COL4A5-208ENST00000505728 NUTM2AQ8IVF1 878 aaPredicted RBP10.64□□□□□ -0.71
COL4A5-208ENST00000505728 RUNDC1Q96C34 613 aa10.64□□□□□ -0.71
COL4A5-208ENST00000505728 COG3Q96JB2 828 aa10.64□□□□□ -0.71
COL4A5-208ENST00000505728 AATKQ6ZMQ8 1374 aa10.64□□□□□ -0.71
COL4A5-208ENST00000505728 TTC21BQ7Z4L5 1316 aa10.63□□□□□ -0.71
COL4A5-208ENST00000505728 ZNF772Q68DY9 489 aaPredicted RBP10.63□□□□□ -0.71
COL4A5-208ENST00000505728 SALL2Q9Y467 1007 aaPredicted RBP10.63□□□□□ -0.71
COL4A5-208ENST00000505728 PNPLA6Q8IY17 1366 aa10.63□□□□□ -0.71
COL4A5-208ENST00000505728 MAP2P11137 1827 aaKnown RBP10.63□□□□□ -0.71
COL4A5-208ENST00000505728 RNF123Q5XPI4 1314 aa10.62□□□□□ -0.71
COL4A5-208ENST00000505728 TTC21AQ8NDW8 1320 aa10.62□□□□□ -0.71
COL4A5-208ENST00000505728 ZNF521Q96K83 1311 aa10.62□□□□□ -0.71
COL4A5-208ENST00000505728 APAF1O14727 1248 aa10.62□□□□□ -0.71
COL4A5-208ENST00000505728 NME9Q86XW9 330 aa10.62□□□□□ -0.71
COL4A5-208ENST00000505728 PNNQ9H307 717 aaKnown RBP10.62□□□□□ -0.71
COL4A5-208ENST00000505728 C1orf167Q5SNV9 1468 aa10.61□□□□□ -0.71
COL4A5-208ENST00000505728 AFF2P51816 1311 aa10.61□□□□□ -0.71
COL4A5-208ENST00000505728 USP6P35125 1406 aa10.61□□□□□ -0.71
COL4A5-208ENST00000505728 SENP3-EIF4A1A0A087X0R7 540 aa10.61□□□□□ -0.71
COL4A5-208ENST00000505728 DIAPH1O60610 1272 aaKnown RBP10.61□□□□□ -0.71
COL4A5-208ENST00000505728 GOLGA2Q08379 1002 aa10.61□□□□□ -0.71
COL4A5-208ENST00000505728 CCDC146Q8IYE0 955 aa10.61□□□□□ -0.71
COL4A5-208ENST00000505728 NGDNQ8NEJ9 315 aaKnown RBP10.61□□□□□ -0.71
COL4A5-208ENST00000505728 POLKQ9UBT6 870 aa10.61□□□□□ -0.71
COL4A5-208ENST00000505728 SSH2Q76I76 1423 aa10.6□□□□□ -0.71
COL4A5-208ENST00000505728 NUTM2FA1L443 756 aa10.6□□□□□ -0.71
COL4A5-208ENST00000505728 U2AF1L5P0DN76 240 aaPredicted RBP10.6□□□□□ -0.71
COL4A5-208ENST00000505728 U2AF1Q01081 240 aaKnown RBP eCLIP10.6□□□□□ -0.71
COL4A5-208ENST00000505728 UPF1Q92900 1129 aaKnown RBP eCLIP10.6□□□□□ -0.71
COL4A5-208ENST00000505728 FMN2Q9NZ56 1722 aa10.6□□□□□ -0.71
COL4A5-208ENST00000505728 COL3A1P02461 1466 aaPredicted RBP10.6□□□□□ -0.71
COL4A5-208ENST00000505728 CDK12Q9NYV4 1490 aaPredicted RBP10.6□□□□□ -0.71
COL4A5-208ENST00000505728 RGPD8O14715 1765 aaPredicted RBP10.6□□□□□ -0.71
COL4A5-208ENST00000505728 COL22A1Q8NFW1 1626 aaPredicted RBP10.59□□□□□ -0.71
COL4A5-208ENST00000505728 MARF1Q9Y4F3 1742 aaKnown RBP10.59□□□□□ -0.71
COL4A5-208ENST00000505728 RXRBP28702 533 aa10.59□□□□□ -0.71
COL4A5-208ENST00000505728 PMFBP1Q8TBY8 1022 aa10.59□□□□□ -0.71
COL4A5-208ENST00000505728 LRRC59Q96AG4 307 aaKnown RBP10.59□□□□□ -0.71
COL4A5-208ENST00000505728 CDCA7LQ96GN5 454 aa10.59□□□□□ -0.71
COL4A5-208ENST00000505728 EP400Q96L91 3159 aa10.58□□□□□ -0.72
COL4A5-208ENST00000505728 USP31Q70CQ4 1352 aa10.58□□□□□ -0.72
COL4A5-208ENST00000505728 SLFN5Q08AF3 891 aa10.58□□□□□ -0.72
COL4A5-208ENST00000505728 CCDC27Q2M243 656 aa10.58□□□□□ -0.72
COL4A5-208ENST00000505728 TRMT2AQ8IZ69 625 aaKnown RBP10.58□□□□□ -0.72
COL4A5-208ENST00000505728 ORAI2Q96SN7 254 aa10.58□□□□□ -0.72
COL4A5-208ENST00000505728 ZRANB1Q9UGI0 708 aa10.58□□□□□ -0.72
COL4A5-208ENST00000505728 RCAN3Q9UKA8 241 aa10.58□□□□□ -0.72
COL4A5-208ENST00000505728 U2SURPO15042 1029 aaKnown RBP10.57□□□□□ -0.72
COL4A5-208ENST00000505728 FCHSD2O94868 740 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms