RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 C8orf34Q49A92 452 aa21.95■■□□□ 1.1
LIN54-204ENST00000505397 FAM161AQ3B820 660 aa21.95■■□□□ 1.1
LIN54-204ENST00000505397 CD163L1Q9NR16 1453 aa21.94■■□□□ 1.1
LIN54-204ENST00000505397 WWC1Q8IX03 1113 aa21.94■■□□□ 1.1
LIN54-204ENST00000505397 ADAMTSL3P82987 1691 aa21.94■■□□□ 1.1
LIN54-204ENST00000505397 WASLO00401 505 aaPredicted RBP21.93■■□□□ 1.1
LIN54-204ENST00000505397 CABP1Q9NZU7 370 aa21.93■■□□□ 1.1
LIN54-204ENST00000505397 ANKRD26Q9UPS8 1709 aa21.93■■□□□ 1.1
LIN54-204ENST00000505397 ATP7BP35670 1465 aa21.93■■□□□ 1.1
LIN54-204ENST00000505397 SLC26A8Q96RN1 970 aa21.93■■□□□ 1.1
LIN54-204ENST00000505397 MED14O60244 1454 aa21.93■■□□□ 1.1
LIN54-204ENST00000505397 IQSEC2Q5JU85 1478 aa21.92■■□□□ 1.1
LIN54-204ENST00000505397 PDE3AQ14432 1141 aa21.92■■□□□ 1.1
LIN54-204ENST00000505397 DIP2AQ14689 1571 aa21.92■■□□□ 1.1
LIN54-204ENST00000505397 PPM1GO15355 546 aaPredicted RBP21.92■■□□□ 1.1
LIN54-204ENST00000505397 KIF20BQ96Q89 1820 aa21.91■■□□□ 1.1
LIN54-204ENST00000505397 ROBO2Q9HCK4 1378 aa21.91■■□□□ 1.1
LIN54-204ENST00000505397 PHF23Q9BUL5 403 aaPredicted RBP21.91■■□□□ 1.1
LIN54-204ENST00000505397 LAS1LQ9Y4W2 734 aaKnown RBP21.89■■□□□ 1.1
LIN54-204ENST00000505397 CFAP53Q96M91 514 aa21.89■■□□□ 1.09
LIN54-204ENST00000505397 PPIP5K1Q6PFW1 1433 aa21.88■■□□□ 1.09
LIN54-204ENST00000505397 ZNF142P52746 1687 aaPredicted RBP21.88■■□□□ 1.09
LIN54-204ENST00000505397 TBX22Q9Y458 520 aa21.88■■□□□ 1.09
LIN54-204ENST00000505397 ADGRB2O60241 1585 aa21.87■■□□□ 1.09
LIN54-204ENST00000505397 RUNDC1Q96C34 613 aa21.87■■□□□ 1.09
LIN54-204ENST00000505397 GGNBP2Q9H3C7 697 aa21.87■■□□□ 1.09
LIN54-204ENST00000505397 NEFMP07197 916 aa21.86■■□□□ 1.09
LIN54-204ENST00000505397 SETD1BQ9UPS6 1966 aaKnown RBP21.86■■□□□ 1.09
LIN54-204ENST00000505397 MTHFSP49914 203 aa21.86■■□□□ 1.09
LIN54-204ENST00000505397 PTPRUQ92729 1446 aa21.85■■□□□ 1.09
LIN54-204ENST00000505397 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.85■■□□□ 1.09
LIN54-204ENST00000505397 NCBP3Q53F19 620 aaKnown RBP21.85■■□□□ 1.09
LIN54-204ENST00000505397 NUDT16Q96DE0 195 aaKnown RBP21.85■■□□□ 1.09
LIN54-204ENST00000505397 FYB1O15117 783 aa21.84■■□□□ 1.09
LIN54-204ENST00000505397 IGHDP01880 384 aa21.84■■□□□ 1.09
LIN54-204ENST00000505397 ITSN1Q15811 1721 aa21.84■■□□□ 1.09
LIN54-204ENST00000505397 AMOTL2Q9Y2J4 779 aa21.84■■□□□ 1.09
LIN54-204ENST00000505397 CDC42BPGQ6DT37 1551 aa21.83■■□□□ 1.09
LIN54-204ENST00000505397 CCDC61Q9Y6R9 512 aa21.83■■□□□ 1.09
LIN54-204ENST00000505397 PTCH1Q13635 1447 aa21.83■■□□□ 1.08
LIN54-204ENST00000505397 CCDC27Q2M243 656 aa21.83■■□□□ 1.08
LIN54-204ENST00000505397 WDR63Q8IWG1 891 aa21.83■■□□□ 1.08
LIN54-204ENST00000505397 VIRMAQ69YN4 1812 aaKnown RBP21.83■■□□□ 1.08
LIN54-204ENST00000505397 TCP11L2Q8N4U5 519 aa21.82■■□□□ 1.08
LIN54-204ENST00000505397 RGS3P49796 1198 aa21.81■■□□□ 1.08
LIN54-204ENST00000505397 CLUAP1Q96AJ1 413 aa21.81■■□□□ 1.08
LIN54-204ENST00000505397 EDC4Q6P2E9 1401 aaKnown RBP21.81■■□□□ 1.08
LIN54-204ENST00000505397 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.8■■□□□ 1.085e-6■■■□□ 15.5
LIN54-204ENST00000505397 CPSF1Q10570 1443 aaKnown RBP21.8■■□□□ 1.08
LIN54-204ENST00000505397 MON2Q7Z3U7 1717 aa21.8■■□□□ 1.08
LIN54-204ENST00000505397 RARSP54136 660 aaKnown RBP21.8■■□□□ 1.08
LIN54-204ENST00000505397 AKAP12Q02952 1782 aa21.8■■□□□ 1.08
LIN54-204ENST00000505397 AAMPQ13685 434 aa21.79■■□□□ 1.08
LIN54-204ENST00000505397 XRN1Q8IZH2 1706 aaKnown RBP21.79■■□□□ 1.08
LIN54-204ENST00000505397 ANKLE2Q86XL3 938 aa21.79■■□□□ 1.08
LIN54-204ENST00000505397 PANK1Q8TE04 598 aa21.78■■□□□ 1.08
LIN54-204ENST00000505397 PIK3R4Q99570 1358 aa21.77■■□□□ 1.08
LIN54-204ENST00000505397 COG6Q9Y2V7 657 aa21.77■■□□□ 1.08
LIN54-204ENST00000505397 TOPAZ1Q8N9V7 1692 aa21.77■■□□□ 1.08
LIN54-204ENST00000505397 RRP7AQ9Y3A4 280 aaKnown RBP21.76■■□□□ 1.07
LIN54-204ENST00000505397 PRR36Q9H6K5 1346 aa21.76■■□□□ 1.07
LIN54-204ENST00000505397 NCKAP5LQ9HCH0 1330 aa21.75■■□□□ 1.07
LIN54-204ENST00000505397 MAPK8IP3Q9UPT6 1336 aa21.75■■□□□ 1.07
LIN54-204ENST00000505397 NEUROD2Q15784 382 aa21.74■■□□□ 1.07
LIN54-204ENST00000505397 ZNF692Q9BU19 519 aaPredicted RBP21.74■■□□□ 1.07
LIN54-204ENST00000505397 CANXP27824 592 aaKnown RBP21.74■■□□□ 1.07
LIN54-204ENST00000505397 SLC4A3P48751 1232 aa21.74■■□□□ 1.07
LIN54-204ENST00000505397 USP19O94966 1318 aa21.72■■□□□ 1.07
LIN54-204ENST00000505397 NUTM2FA1L443 756 aa21.71■■□□□ 1.07
LIN54-204ENST00000505397 NFKBIBQ15653 356 aa21.71■■□□□ 1.07
LIN54-204ENST00000505397 U2AF1L5P0DN76 240 aaPredicted RBP21.71■■□□□ 1.07
LIN54-204ENST00000505397 U2AF1Q01081 240 aaKnown RBP eCLIP21.71■■□□□ 1.07
LIN54-204ENST00000505397 FRAT1Q92837 279 aaPredicted RBP21.71■■□□□ 1.07
LIN54-204ENST00000505397 DAXXQ9UER7 740 aaPredicted RBP21.7■■□□□ 1.06
LIN54-204ENST00000505397 MAP2P11137 1827 aaKnown RBP21.7■■□□□ 1.06
LIN54-204ENST00000505397 RLBP1P12271 317 aa21.7■■□□□ 1.06
LIN54-204ENST00000505397 PMFBP1Q8TBY8 1022 aa21.7■■□□□ 1.06
LIN54-204ENST00000505397 KCNA6P17658 529 aa21.69■■□□□ 1.06
LIN54-204ENST00000505397 COL3A1P02461 1466 aaPredicted RBP21.69■■□□□ 1.06
LIN54-204ENST00000505397 CHD2O14647 1828 aaKnown RBP21.69■■□□□ 1.06
LIN54-204ENST00000505397 NME9Q86XW9 330 aa21.69■■□□□ 1.06
LIN54-204ENST00000505397 MYH16Q9H6N6 1097 aa21.68■■□□□ 1.06
LIN54-204ENST00000505397 COG3Q96JB2 828 aa21.68■■□□□ 1.06
LIN54-204ENST00000505397 U2SURPO15042 1029 aaKnown RBP21.67■■□□□ 1.06
LIN54-204ENST00000505397 PCDHB15Q9Y5E8 787 aa21.67■■□□□ 1.06
LIN54-204ENST00000505397 ACEP12821 1306 aa21.67■■□□□ 1.06
LIN54-204ENST00000505397 NRKQ7Z2Y5 1582 aa21.67■■□□□ 1.06
LIN54-204ENST00000505397 PLEKHG3A1L390 1219 aa21.67■■□□□ 1.06
LIN54-204ENST00000505397 TNNQ9UQP3 1299 aa21.66■■□□□ 1.06
LIN54-204ENST00000505397 RGPD8O14715 1765 aaPredicted RBP21.65■■□□□ 1.06
LIN54-204ENST00000505397 DIAPH1O60610 1272 aaKnown RBP21.65■■□□□ 1.06
LIN54-204ENST00000505397 CT47B1P0C2W7 299 aaPredicted RBP21.65■■□□□ 1.06
LIN54-204ENST00000505397 PLEKHF1Q96S99 279 aa21.64■■□□□ 1.06
LIN54-204ENST00000505397 PNPLA6Q8IY17 1366 aa21.64■■□□□ 1.05
LIN54-204ENST00000505397 USP6P35125 1406 aa21.64■■□□□ 1.05
LIN54-204ENST00000505397 NPHP4O75161 1426 aaPredicted RBP21.63■■□□□ 1.05
LIN54-204ENST00000505397 POLKQ9UBT6 870 aa21.63■■□□□ 1.05
LIN54-204ENST00000505397 SEC24BO95487 1268 aa21.63■■□□□ 1.05
LIN54-204ENST00000505397 TTC21BQ7Z4L5 1316 aa21.62■■□□□ 1.05
LIN54-204ENST00000505397 AATKQ6ZMQ8 1374 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms