RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 C8orf34Q49A92 452 aa21.95■■□□□ 1.1
LIN54-204ENST00000505397 FAM161AQ3B820 660 aa21.95■■□□□ 1.1
LIN54-204ENST00000505397 CD163L1Q9NR16 1453 aa21.94■■□□□ 1.1
LIN54-204ENST00000505397 WWC1Q8IX03 1113 aa21.94■■□□□ 1.1
LIN54-204ENST00000505397 ADAMTSL3P82987 1691 aa21.94■■□□□ 1.1
LIN54-204ENST00000505397 WASLO00401 505 aaPredicted RBP21.93■■□□□ 1.1
LIN54-204ENST00000505397 CABP1Q9NZU7 370 aa21.93■■□□□ 1.1
LIN54-204ENST00000505397 ANKRD26Q9UPS8 1709 aa21.93■■□□□ 1.1
LIN54-204ENST00000505397 ATP7BP35670 1465 aa21.93■■□□□ 1.1
LIN54-204ENST00000505397 SLC26A8Q96RN1 970 aa21.93■■□□□ 1.1
LIN54-204ENST00000505397 MED14O60244 1454 aa21.93■■□□□ 1.1
LIN54-204ENST00000505397 IQSEC2Q5JU85 1478 aa21.92■■□□□ 1.1
LIN54-204ENST00000505397 PDE3AQ14432 1141 aa21.92■■□□□ 1.1
LIN54-204ENST00000505397 DIP2AQ14689 1571 aa21.92■■□□□ 1.1
LIN54-204ENST00000505397 PPM1GO15355 546 aaPredicted RBP21.92■■□□□ 1.1
LIN54-204ENST00000505397 KIF20BQ96Q89 1820 aa21.91■■□□□ 1.1
LIN54-204ENST00000505397 ROBO2Q9HCK4 1378 aa21.91■■□□□ 1.1
LIN54-204ENST00000505397 PHF23Q9BUL5 403 aaPredicted RBP21.91■■□□□ 1.1
LIN54-204ENST00000505397 LAS1LQ9Y4W2 734 aaKnown RBP21.89■■□□□ 1.1
LIN54-204ENST00000505397 CFAP53Q96M91 514 aa21.89■■□□□ 1.09
LIN54-204ENST00000505397 PPIP5K1Q6PFW1 1433 aa21.88■■□□□ 1.09
LIN54-204ENST00000505397 ZNF142P52746 1687 aaPredicted RBP21.88■■□□□ 1.09
LIN54-204ENST00000505397 TBX22Q9Y458 520 aa21.88■■□□□ 1.09
LIN54-204ENST00000505397 ADGRB2O60241 1585 aa21.87■■□□□ 1.09
LIN54-204ENST00000505397 RUNDC1Q96C34 613 aa21.87■■□□□ 1.09
LIN54-204ENST00000505397 GGNBP2Q9H3C7 697 aa21.87■■□□□ 1.09
LIN54-204ENST00000505397 NEFMP07197 916 aa21.86■■□□□ 1.09
LIN54-204ENST00000505397 SETD1BQ9UPS6 1966 aaKnown RBP21.86■■□□□ 1.09
LIN54-204ENST00000505397 MTHFSP49914 203 aa21.86■■□□□ 1.09
LIN54-204ENST00000505397 PTPRUQ92729 1446 aa21.85■■□□□ 1.09
LIN54-204ENST00000505397 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.85■■□□□ 1.09
LIN54-204ENST00000505397 NCBP3Q53F19 620 aaKnown RBP21.85■■□□□ 1.09
LIN54-204ENST00000505397 NUDT16Q96DE0 195 aaKnown RBP21.85■■□□□ 1.09
LIN54-204ENST00000505397 FYB1O15117 783 aa21.84■■□□□ 1.09
LIN54-204ENST00000505397 IGHDP01880 384 aa21.84■■□□□ 1.09
LIN54-204ENST00000505397 ITSN1Q15811 1721 aa21.84■■□□□ 1.09
LIN54-204ENST00000505397 AMOTL2Q9Y2J4 779 aa21.84■■□□□ 1.09
LIN54-204ENST00000505397 CDC42BPGQ6DT37 1551 aa21.83■■□□□ 1.09
LIN54-204ENST00000505397 CCDC61Q9Y6R9 512 aa21.83■■□□□ 1.09
LIN54-204ENST00000505397 PTCH1Q13635 1447 aa21.83■■□□□ 1.08
LIN54-204ENST00000505397 CCDC27Q2M243 656 aa21.83■■□□□ 1.08
LIN54-204ENST00000505397 WDR63Q8IWG1 891 aa21.83■■□□□ 1.08
LIN54-204ENST00000505397 VIRMAQ69YN4 1812 aaKnown RBP21.83■■□□□ 1.08
LIN54-204ENST00000505397 TCP11L2Q8N4U5 519 aa21.82■■□□□ 1.08
LIN54-204ENST00000505397 RGS3P49796 1198 aa21.81■■□□□ 1.08
LIN54-204ENST00000505397 CLUAP1Q96AJ1 413 aa21.81■■□□□ 1.08
LIN54-204ENST00000505397 EDC4Q6P2E9 1401 aaKnown RBP21.81■■□□□ 1.08
LIN54-204ENST00000505397 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.8■■□□□ 1.085e-6■■■□□ 15.5
LIN54-204ENST00000505397 CPSF1Q10570 1443 aaKnown RBP21.8■■□□□ 1.08
LIN54-204ENST00000505397 MON2Q7Z3U7 1717 aa21.8■■□□□ 1.08
LIN54-204ENST00000505397 RARSP54136 660 aaKnown RBP21.8■■□□□ 1.08
LIN54-204ENST00000505397 AKAP12Q02952 1782 aa21.8■■□□□ 1.08
LIN54-204ENST00000505397 AAMPQ13685 434 aa21.79■■□□□ 1.08
LIN54-204ENST00000505397 XRN1Q8IZH2 1706 aaKnown RBP21.79■■□□□ 1.08
LIN54-204ENST00000505397 ANKLE2Q86XL3 938 aa21.79■■□□□ 1.08
LIN54-204ENST00000505397 PANK1Q8TE04 598 aa21.78■■□□□ 1.08
LIN54-204ENST00000505397 PIK3R4Q99570 1358 aa21.77■■□□□ 1.08
LIN54-204ENST00000505397 COG6Q9Y2V7 657 aa21.77■■□□□ 1.08
LIN54-204ENST00000505397 TOPAZ1Q8N9V7 1692 aa21.77■■□□□ 1.08
LIN54-204ENST00000505397 RRP7AQ9Y3A4 280 aaKnown RBP21.76■■□□□ 1.07
LIN54-204ENST00000505397 PRR36Q9H6K5 1346 aa21.76■■□□□ 1.07
LIN54-204ENST00000505397 NCKAP5LQ9HCH0 1330 aa21.75■■□□□ 1.07
LIN54-204ENST00000505397 MAPK8IP3Q9UPT6 1336 aa21.75■■□□□ 1.07
LIN54-204ENST00000505397 NEUROD2Q15784 382 aa21.74■■□□□ 1.07
LIN54-204ENST00000505397 ZNF692Q9BU19 519 aaPredicted RBP21.74■■□□□ 1.07
LIN54-204ENST00000505397 CANXP27824 592 aaKnown RBP21.74■■□□□ 1.07
LIN54-204ENST00000505397 SLC4A3P48751 1232 aa21.74■■□□□ 1.07
LIN54-204ENST00000505397 USP19O94966 1318 aa21.72■■□□□ 1.07
LIN54-204ENST00000505397 NUTM2FA1L443 756 aa21.71■■□□□ 1.07
LIN54-204ENST00000505397 NFKBIBQ15653 356 aa21.71■■□□□ 1.07
LIN54-204ENST00000505397 U2AF1L5P0DN76 240 aaPredicted RBP21.71■■□□□ 1.07
LIN54-204ENST00000505397 U2AF1Q01081 240 aaKnown RBP eCLIP21.71■■□□□ 1.07
LIN54-204ENST00000505397 FRAT1Q92837 279 aaPredicted RBP21.71■■□□□ 1.07
LIN54-204ENST00000505397 DAXXQ9UER7 740 aaPredicted RBP21.7■■□□□ 1.06
LIN54-204ENST00000505397 MAP2P11137 1827 aaKnown RBP21.7■■□□□ 1.06
LIN54-204ENST00000505397 RLBP1P12271 317 aa21.7■■□□□ 1.06
LIN54-204ENST00000505397 PMFBP1Q8TBY8 1022 aa21.7■■□□□ 1.06
LIN54-204ENST00000505397 KCNA6P17658 529 aa21.69■■□□□ 1.06
LIN54-204ENST00000505397 COL3A1P02461 1466 aaPredicted RBP21.69■■□□□ 1.06
LIN54-204ENST00000505397 CHD2O14647 1828 aaKnown RBP21.69■■□□□ 1.06
LIN54-204ENST00000505397 NME9Q86XW9 330 aa21.69■■□□□ 1.06
LIN54-204ENST00000505397 MYH16Q9H6N6 1097 aa21.68■■□□□ 1.06
LIN54-204ENST00000505397 COG3Q96JB2 828 aa21.68■■□□□ 1.06
LIN54-204ENST00000505397 U2SURPO15042 1029 aaKnown RBP21.67■■□□□ 1.06
LIN54-204ENST00000505397 PCDHB15Q9Y5E8 787 aa21.67■■□□□ 1.06
LIN54-204ENST00000505397 ACEP12821 1306 aa21.67■■□□□ 1.06
LIN54-204ENST00000505397 NRKQ7Z2Y5 1582 aa21.67■■□□□ 1.06
LIN54-204ENST00000505397 PLEKHG3A1L390 1219 aa21.67■■□□□ 1.06
LIN54-204ENST00000505397 TNNQ9UQP3 1299 aa21.66■■□□□ 1.06
LIN54-204ENST00000505397 RGPD8O14715 1765 aaPredicted RBP21.65■■□□□ 1.06
LIN54-204ENST00000505397 DIAPH1O60610 1272 aaKnown RBP21.65■■□□□ 1.06
LIN54-204ENST00000505397 CT47B1P0C2W7 299 aaPredicted RBP21.65■■□□□ 1.06
LIN54-204ENST00000505397 PLEKHF1Q96S99 279 aa21.64■■□□□ 1.06
LIN54-204ENST00000505397 PNPLA6Q8IY17 1366 aa21.64■■□□□ 1.05
LIN54-204ENST00000505397 USP6P35125 1406 aa21.64■■□□□ 1.05
LIN54-204ENST00000505397 NPHP4O75161 1426 aaPredicted RBP21.63■■□□□ 1.05
LIN54-204ENST00000505397 POLKQ9UBT6 870 aa21.63■■□□□ 1.05
LIN54-204ENST00000505397 SEC24BO95487 1268 aa21.63■■□□□ 1.05
LIN54-204ENST00000505397 TTC21BQ7Z4L5 1316 aa21.62■■□□□ 1.05
LIN54-204ENST00000505397 AATKQ6ZMQ8 1374 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms