RNA–Protein interactions for RNA: ENST00000505205.1

TRIM23-204, Transcript of tripartite motif containing 23, humanhuman

TSL 3

Gene TRIM23, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-204ENST00000505205 PIK3C2GO75747 1445 aa13.81□□□□□ -0.2
TRIM23-204ENST00000505205 SPINK5Q9NQ38 1064 aaPredicted RBP13.81□□□□□ -0.2
TRIM23-204ENST00000505205 ARHGEF10O15013 1369 aa13.81□□□□□ -0.2
TRIM23-204ENST00000505205 SPATA31E1Q6ZUB1 1445 aa13.81□□□□□ -0.2
TRIM23-204ENST00000505205 THSD7AQ9UPZ6 1657 aa13.8□□□□□ -0.2
TRIM23-204ENST00000505205 RGL3Q3MIN7 710 aa13.8□□□□□ -0.2
TRIM23-204ENST00000505205 TRPM3Q9HCF6 1732 aaPredicted RBP13.8□□□□□ -0.2
TRIM23-204ENST00000505205 COL14A1Q05707 1796 aaKnown RBP13.8□□□□□ -0.2
TRIM23-204ENST00000505205 BTG4Q9NY30 223 aa13.79□□□□□ -0.2
TRIM23-204ENST00000505205 ANKRD30BQ9BXX2 1392 aa13.79□□□□□ -0.2
TRIM23-204ENST00000505205 DISP2A7MBM2 1401 aa13.79□□□□□ -0.2
TRIM23-204ENST00000505205 ALS2Q96Q42 1657 aa13.78□□□□□ -0.2
TRIM23-204ENST00000505205 ADGRB2O60241 1585 aa13.77□□□□□ -0.21
TRIM23-204ENST00000505205 EZH2Q15910 746 aaKnown RBP13.77□□□□□ -0.21
TRIM23-204ENST00000505205 CRYBG1Q9Y4K1 1723 aa13.77□□□□□ -0.21
TRIM23-204ENST00000505205 PMFBP1Q8TBY8 1022 aa13.76□□□□□ -0.21
TRIM23-204ENST00000505205 SPATA31A5Q5VU36 1347 aa13.75□□□□□ -0.21
TRIM23-204ENST00000505205 SPATA31A7Q8IWB4 1347 aa13.75□□□□□ -0.21
TRIM23-204ENST00000505205 SAFB2Q14151 953 aaKnown RBP eCLIP13.75□□□□□ -0.21
TRIM23-204ENST00000505205 SIRT1Q96EB6 747 aa13.75□□□□□ -0.21
TRIM23-204ENST00000505205 RREB1Q92766 1687 aa13.74□□□□□ -0.21
TRIM23-204ENST00000505205 ANKARQ7Z5J8 1434 aa13.73□□□□□ -0.21
TRIM23-204ENST00000505205 CACNB1Q02641 598 aaPredicted RBP13.73□□□□□ -0.21
TRIM23-204ENST00000505205 PRAM1Q96QH2 718 aa13.73□□□□□ -0.21
TRIM23-204ENST00000505205 CAMKK2Q96RR4 588 aa13.73□□□□□ -0.21
TRIM23-204ENST00000505205 NUP188Q5SRE5 1749 aa13.73□□□□□ -0.21
TRIM23-204ENST00000505205 CAPN15O75808 1086 aa13.72□□□□□ -0.21
TRIM23-204ENST00000505205 TRIM37O94972 964 aa13.72□□□□□ -0.21
TRIM23-204ENST00000505205 YY1P25490 414 aa13.72□□□□□ -0.21
TRIM23-204ENST00000505205 CFAP70Q5T0N1 1121 aa13.71□□□□□ -0.21
TRIM23-204ENST00000505205 C14orf93Q9H972 538 aaKnown RBP13.71□□□□□ -0.21
TRIM23-204ENST00000505205 DHX57Q6P158 1386 aaKnown RBP13.71□□□□□ -0.22
TRIM23-204ENST00000505205 DLC1Q96QB1 1528 aa13.7□□□□□ -0.22
TRIM23-204ENST00000505205 GPRASP1Q5JY77 1395 aa13.69□□□□□ -0.22
TRIM23-204ENST00000505205 PARD3Q8TEW0 1356 aa13.69□□□□□ -0.22
TRIM23-204ENST00000505205 PHRF1Q9P1Y6 1649 aaKnown RBP13.68□□□□□ -0.22
TRIM23-204ENST00000505205 SPATA31A1Q5TZJ5 1347 aa13.68□□□□□ -0.22
TRIM23-204ENST00000505205 PRR36Q9H6K5 1346 aa13.68□□□□□ -0.22
TRIM23-204ENST00000505205 ACIN1Q9UKV3 1341 aaKnown RBP13.68□□□□□ -0.22
TRIM23-204ENST00000505205 APBA3O96018 575 aa13.68□□□□□ -0.22
TRIM23-204ENST00000505205 PRDM11Q9NQV5 511 aa13.68□□□□□ -0.22
TRIM23-204ENST00000505205 POGKQ9P215 609 aa13.68□□□□□ -0.22
TRIM23-204ENST00000505205 FAM196AQ6ZSG2 479 aa13.67□□□□□ -0.22
TRIM23-204ENST00000505205 HIRIP3Q9BW71 556 aaPredicted RBP13.67□□□□□ -0.22
TRIM23-204ENST00000505205 TULP4Q9NRJ4 1543 aa13.67□□□□□ -0.22
TRIM23-204ENST00000505205 MPHOSPH9Q99550 1183 aa13.66□□□□□ -0.22
TRIM23-204ENST00000505205 ZNF219Q9P2Y4 722 aaPredicted RBP13.66□□□□□ -0.22
TRIM23-204ENST00000505205 KIAA0232Q92628 1395 aa13.66□□□□□ -0.22
TRIM23-204ENST00000505205 CHRNA2Q15822 529 aa13.65□□□□□ -0.22
TRIM23-204ENST00000505205 STRN4Q9NRL3 753 aa13.65□□□□□ -0.22
TRIM23-204ENST00000505205 ADGRB1O14514 1584 aa13.65□□□□□ -0.22
TRIM23-204ENST00000505205 CAMTA1Q9Y6Y1 1673 aa13.65□□□□□ -0.22
TRIM23-204ENST00000505205 MINK1Q8N4C8 1332 aaPredicted RBP13.64□□□□□ -0.23
TRIM23-204ENST00000505205 PAK3O75914 559 aaPredicted RBP13.64□□□□□ -0.23
TRIM23-204ENST00000505205 EIF3AQ14152 1382 aaKnown RBP13.63□□□□□ -0.23
TRIM23-204ENST00000505205 NGDNQ8NEJ9 315 aaKnown RBP13.63□□□□□ -0.23
TRIM23-204ENST00000505205 USP35Q9P2H5 1018 aa13.63□□□□□ -0.23
TRIM23-204ENST00000505205 ITSN1Q15811 1721 aa13.62□□□□□ -0.23
TRIM23-204ENST00000505205 NBPF8Q3BBV2 869 aa13.62□□□□□ -0.23
TRIM23-204ENST00000505205 NBPF14Q5TI25 921 aa13.62□□□□□ -0.23
TRIM23-204ENST00000505205 PPP1R1BQ9UD71 204 aaPredicted RBP13.62□□□□□ -0.23
TRIM23-204ENST00000505205 TRAK1Q9UPV9 953 aa13.62□□□□□ -0.23
TRIM23-204ENST00000505205 ZC3H6P61129 1189 aaKnown RBP13.61□□□□□ -0.23
TRIM23-204ENST00000505205 SPON1Q9HCB6 807 aa13.61□□□□□ -0.23
TRIM23-204ENST00000505205 SSH2Q76I76 1423 aa13.61□□□□□ -0.23
TRIM23-204ENST00000505205 NINLQ9Y2I6 1382 aa13.6□□□□□ -0.23
TRIM23-204ENST00000505205 WASLO00401 505 aaPredicted RBP13.6□□□□□ -0.23
TRIM23-204ENST00000505205 KCNQ2O43526 872 aa13.6□□□□□ -0.23
TRIM23-204ENST00000505205 PDE3BQ13370 1112 aa13.6□□□□□ -0.23
TRIM23-204ENST00000505205 BARGINQ6ZT62 677 aa13.6□□□□□ -0.23
TRIM23-204ENST00000505205 NRKQ7Z2Y5 1582 aa13.6□□□□□ -0.23
TRIM23-204ENST00000505205 ATP7BP35670 1465 aa13.6□□□□□ -0.23
TRIM23-204ENST00000505205 LMO7Q8WWI1 1683 aa13.59□□□□□ -0.23
TRIM23-204ENST00000505205 NUTM2GQ5VZR2 741 aa13.59□□□□□ -0.23
TRIM23-204ENST00000505205 PARP4Q9UKK3 1724 aaKnown RBP13.59□□□□□ -0.23
TRIM23-204ENST00000505205 CASZ1Q86V15 1759 aa13.58□□□□□ -0.23
TRIM23-204ENST00000505205 LARP1Q6PKG0 1096 aaKnown RBP13.58□□□□□ -0.24
TRIM23-204ENST00000505205 ARHGEF28Q8N1W1 1705 aaKnown RBP13.57□□□□□ -0.24
TRIM23-204ENST00000505205 EVA1CP58658 441 aa13.57□□□□□ -0.24
TRIM23-204ENST00000505205 RGPD3A6NKT7 1758 aaPredicted RBP13.57□□□□□ -0.24
TRIM23-204ENST00000505205 RGPD4Q7Z3J3 1758 aa13.57□□□□□ -0.24
TRIM23-204ENST00000505205 TOPAZ1Q8N9V7 1692 aa13.56□□□□□ -0.24
TRIM23-204ENST00000505205 PEAK1Q9H792 1746 aa13.56□□□□□ -0.24
TRIM23-204ENST00000505205 SBF2Q86WG5 1849 aa13.56□□□□□ -0.24
TRIM23-204ENST00000505205 TCP11L2Q8N4U5 519 aa13.56□□□□□ -0.24
TRIM23-204ENST00000505205 MYOM1P52179 1685 aa13.55□□□□□ -0.24
TRIM23-204ENST00000505205 UTRNP46939 3433 aa13.54□□□□□ -0.24
TRIM23-204ENST00000505205 NUDT16Q96DE0 195 aaKnown RBP13.54□□□□□ -0.24
TRIM23-204ENST00000505205 ANO8Q9HCE9 1232 aaPredicted RBP13.54□□□□□ -0.24
TRIM23-204ENST00000505205 LRRC37A3O60309 1634 aa13.53□□□□□ -0.24
TRIM23-204ENST00000505205 POLR3AO14802 1390 aaPredicted RBP13.53□□□□□ -0.24
TRIM23-204ENST00000505205 PDGFDQ9GZP0 370 aaPredicted RBP13.52□□□□□ -0.25
TRIM23-204ENST00000505205 CPDO75976 1380 aa13.52□□□□□ -0.25
TRIM23-204ENST00000505205 OVOS2A0A0G2JMS6 1433 aa13.52□□□□□ -0.25
TRIM23-204ENST00000505205 OVOS2A0A0J9YW53 1432 aa13.52□□□□□ -0.25
TRIM23-204ENST00000505205 OVOS2Q6IE36 1432 aa13.52□□□□□ -0.25
TRIM23-204ENST00000505205 COL5A2P05997 1499 aaPredicted RBP13.52□□□□□ -0.25
TRIM23-204ENST00000505205 USP19O94966 1318 aa13.51□□□□□ -0.25
TRIM23-204ENST00000505205 ACEP12821 1306 aa13.51□□□□□ -0.25
TRIM23-204ENST00000505205 ZNF784Q8NCA9 323 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms