RNA–Protein interactions for RNA: ENST00000505108.1

TRAPPC13-207, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-207ENST00000505108 IFFO2Q5TF58 517 aa11.68□□□□□ -0.54
TRAPPC13-207ENST00000505108 UNC93B1Q9H1C4 597 aa11.68□□□□□ -0.54
TRAPPC13-207ENST00000505108 PRM3Q9NNZ6 103 aa11.68□□□□□ -0.54
TRAPPC13-207ENST00000505108 ANKLE1Q8NAG6 615 aa11.67□□□□□ -0.54
TRAPPC13-207ENST00000505108 FKBPLQ9UIM3 349 aa11.67□□□□□ -0.54
TRAPPC13-207ENST00000505108 TRAK2O60296 914 aa11.66□□□□□ -0.54
TRAPPC13-207ENST00000505108 GGCXP38435 758 aa11.66□□□□□ -0.54
TRAPPC13-207ENST00000505108 SUPT5HO00267 1087 aaKnown RBP11.65□□□□□ -0.54
TRAPPC13-207ENST00000505108 EMID1Q96A84 441 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC13-207ENST00000505108 BAP1Q92560 729 aa11.61□□□□□ -0.55
TRAPPC13-207ENST00000505108 ZNF330Q9Y3S2 320 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC13-207ENST00000505108 POM121CA8CG34 1229 aa11.6□□□□□ -0.55
TRAPPC13-207ENST00000505108 LINC01559Q495D7 138 aa11.6□□□□□ -0.55
TRAPPC13-207ENST00000505108 PNMA1Q8ND90 353 aa11.6□□□□□ -0.55
TRAPPC13-207ENST00000505108 ARMC2Q8NEN0 867 aa11.6□□□□□ -0.55
TRAPPC13-207ENST00000505108 A0A0G2JS52 829 aa11.59□□□□□ -0.55
TRAPPC13-207ENST00000505108 ARID3CA6NKF2 412 aa11.59□□□□□ -0.55
TRAPPC13-207ENST00000505108 VAC14Q08AM6 782 aa11.59□□□□□ -0.55
TRAPPC13-207ENST00000505108 OCSTAMPQ9BR26 566 aa11.59□□□□□ -0.55
TRAPPC13-207ENST00000505108 ZNF777Q9ULD5 760 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC13-207ENST00000505108 ZC3H4Q9UPT8 1303 aaKnown RBP11.59□□□□□ -0.55
TRAPPC13-207ENST00000505108 FBXO45P0C2W1 286 aa11.58□□□□□ -0.56
TRAPPC13-207ENST00000505108 LIAT1Q6ZQX7 453 aa11.58□□□□□ -0.56
TRAPPC13-207ENST00000505108 C1orf115Q9H7X2 142 aa11.58□□□□□ -0.56
TRAPPC13-207ENST00000505108 TRIM32Q13049 653 aa11.57□□□□□ -0.56
TRAPPC13-207ENST00000505108 NBPF14Q5TI25 921 aa11.57□□□□□ -0.56
TRAPPC13-207ENST00000505108 PDXDC2PQ6P474 469 aa11.57□□□□□ -0.56
TRAPPC13-207ENST00000505108 ZBTB24O43167 697 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC13-207ENST00000505108 SH3BP5LQ7L8J4 393 aa11.56□□□□□ -0.56
TRAPPC13-207ENST00000505108 ZNF511Q8NB15 262 aa11.56□□□□□ -0.56
TRAPPC13-207ENST00000505108 GPKOWQ92917 476 aaPredicted RBP eCLIP11.56□□□□□ -0.56
TRAPPC13-207ENST00000505108 FOXJ1Q92949 421 aa11.56□□□□□ -0.56
TRAPPC13-207ENST00000505108 ZBBXA8MT70 800 aa11.55□□□□□ -0.56
TRAPPC13-207ENST00000505108 SH3BP2P78314 561 aa11.55□□□□□ -0.56
TRAPPC13-207ENST00000505108 WASHC4Q2M389 1173 aa11.55□□□□□ -0.56
TRAPPC13-207ENST00000505108 WWC1Q8IX03 1113 aa11.55□□□□□ -0.56
TRAPPC13-207ENST00000505108 RPIAP49247 311 aa11.54□□□□□ -0.56
TRAPPC13-207ENST00000505108 SKOR1P84550 965 aa11.54□□□□□ -0.56
TRAPPC13-207ENST00000505108 NR1H3Q13133 447 aa11.54□□□□□ -0.56
TRAPPC13-207ENST00000505108 C4orf48Q5BLP8 95 aa11.54□□□□□ -0.56
TRAPPC13-207ENST00000505108 ADAMTS19Q8TE59 1207 aa11.53□□□□□ -0.56
TRAPPC13-207ENST00000505108 PTK2Q05397 1052 aa11.52□□□□□ -0.57
TRAPPC13-207ENST00000505108 SH3RF1Q7Z6J0 888 aa11.52□□□□□ -0.57
TRAPPC13-207ENST00000505108 GPSM3Q9Y4H4 160 aa11.52□□□□□ -0.57
TRAPPC13-207ENST00000505108 SLC19A1P41440 591 aa11.51□□□□□ -0.57
TRAPPC13-207ENST00000505108 ARHGAP9Q9BRR9 750 aa11.51□□□□□ -0.57
TRAPPC13-207ENST00000505108 ADAM32Q8TC27 787 aa11.5□□□□□ -0.57
TRAPPC13-207ENST00000505108 CARD14Q9BXL6 1004 aa11.5□□□□□ -0.57
TRAPPC13-207ENST00000505108 MAGEB6P1A0A0J9YX57 407 aa11.49□□□□□ -0.57
TRAPPC13-207ENST00000505108 CD2BP2O95400 341 aaKnown RBP11.48□□□□□ -0.57
TRAPPC13-207ENST00000505108 WNT7BP56706 349 aa11.48□□□□□ -0.57
TRAPPC13-207ENST00000505108 AGERQ15109 404 aa11.48□□□□□ -0.57
TRAPPC13-207ENST00000505108 HDGFL1Q5TGJ6 251 aa11.48□□□□□ -0.57
TRAPPC13-207ENST00000505108 BPHLQ86WA6 291 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC13-207ENST00000505108 GLMNQ92990 594 aa11.48□□□□□ -0.57
TRAPPC13-207ENST00000505108 ALG2Q9H553 416 aa11.48□□□□□ -0.57
TRAPPC13-207ENST00000505108 ERFEQ4G0M1 354 aa11.46□□□□□ -0.57
TRAPPC13-207ENST00000505108 SPRYD7Q5W111 196 aa11.46□□□□□ -0.57
TRAPPC13-207ENST00000505108 ZBTB33Q86T24 672 aa11.46□□□□□ -0.57
TRAPPC13-207ENST00000505108 PRKD2Q9BZL6 878 aa11.46□□□□□ -0.57
TRAPPC13-207ENST00000505108 EIF4G2P78344 907 aaKnown RBP eCLIP11.45□□□□□ -0.58
TRAPPC13-207ENST00000505108 C1QTNF2Q9BXJ5 285 aa11.45□□□□□ -0.58
TRAPPC13-207ENST00000505108 RC3H1Q5TC82 1133 aaKnown RBP11.44□□□□□ -0.58
TRAPPC13-207ENST00000505108 CALR3Q96L12 384 aaKnown RBP11.44□□□□□ -0.58
TRAPPC13-207ENST00000505108 PCDHB9Q9Y5E1 797 aa11.44□□□□□ -0.58
TRAPPC13-207ENST00000505108 SOX11P35716 441 aa11.42□□□□□ -0.58
TRAPPC13-207ENST00000505108 SEMA3FQ13275 785 aa11.42□□□□□ -0.58
TRAPPC13-207ENST00000505108 CCDC82Q8N4S0 544 aa11.42□□□□□ -0.58
TRAPPC13-207ENST00000505108 EHBP1Q8NDI1 1231 aa11.41□□□□□ -0.58
TRAPPC13-207ENST00000505108 V9GY48 417 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC13-207ENST00000505108 VARSP26640 1264 aaKnown RBP11.4□□□□□ -0.58
TRAPPC13-207ENST00000505108 ZNF697Q5TEC3 545 aa11.4□□□□□ -0.58
TRAPPC13-207ENST00000505108 ZNF598Q86UK7 904 aaKnown RBP11.4□□□□□ -0.58
TRAPPC13-207ENST00000505108 WNT7AO00755 349 aa11.39□□□□□ -0.59
TRAPPC13-207ENST00000505108 DZIP3Q86Y13 1208 aaKnown RBP11.39□□□□□ -0.59
TRAPPC13-207ENST00000505108 TRMT44Q8IYL2 757 aaKnown RBP11.39□□□□□ -0.59
TRAPPC13-207ENST00000505108 UCN2Q96RP3 112 aa11.39□□□□□ -0.59
TRAPPC13-207ENST00000505108 FAM174AQ8TBP5 190 aa11.38□□□□□ -0.59
TRAPPC13-207ENST00000505108 SLC10A4Q96EP9 437 aa11.38□□□□□ -0.59
TRAPPC13-207ENST00000505108 MRGPRX2Q96LB1 330 aa11.38□□□□□ -0.59
TRAPPC13-207ENST00000505108 ARID3AQ99856 593 aa11.38□□□□□ -0.59
TRAPPC13-207ENST00000505108 PKD2L1Q9P0L9 805 aa11.38□□□□□ -0.59
TRAPPC13-207ENST00000505108 CEP126Q9P2H0 1117 aa11.38□□□□□ -0.59
TRAPPC13-207ENST00000505108 SIAH2O43255 324 aa11.37□□□□□ -0.59
TRAPPC13-207ENST00000505108 FOXC1Q12948 553 aa11.37□□□□□ -0.59
TRAPPC13-207ENST00000505108 PIK3CDO00329 1044 aa11.36□□□□□ -0.59
TRAPPC13-207ENST00000505108 TLL2Q9Y6L7 1015 aa11.36□□□□□ -0.59
TRAPPC13-207ENST00000505108 GIGYF1O75420 1035 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC13-207ENST00000505108 MCCD1P59942 119 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC13-207ENST00000505108 CCDC97Q96F63 343 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC13-207ENST00000505108 ARID5BQ14865 1188 aa11.33□□□□□ -0.6
TRAPPC13-207ENST00000505108 TBC1D9Q6ZT07 1266 aa11.33□□□□□ -0.6
TRAPPC13-207ENST00000505108 PHTF2Q8N3S3 785 aa11.33□□□□□ -0.6
TRAPPC13-207ENST00000505108 CDK15Q96Q40 435 aa11.33□□□□□ -0.6
TRAPPC13-207ENST00000505108 GDF9O60383 454 aa11.32□□□□□ -0.6
TRAPPC13-207ENST00000505108 TRIM67Q6ZTA4 783 aa11.32□□□□□ -0.6
TRAPPC13-207ENST00000505108 SERPINA10Q9UK55 444 aa11.32□□□□□ -0.6
TRAPPC13-207ENST00000505108 ESPNB1AK53 854 aa11.31□□□□□ -0.6
TRAPPC13-207ENST00000505108 TNFRSF10AO00220 468 aa11.31□□□□□ -0.6
TRAPPC13-207ENST00000505108 GRM5P41594 1212 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms