RNA–Protein interactions for RNA: ENST00000504842.5

PROM1-205, Transcript of prominin 1, humanhuman

TSL 5

Gene PROM1, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-205ENST00000504842 ADAMTS19Q8TE59 1207 aa8.84□□□□□ -0.99
PROM1-205ENST00000504842 PPP1R12CQ9BZL4 782 aa8.84□□□□□ -0.99
PROM1-205ENST00000504842 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.84□□□□□ -0.99
PROM1-205ENST00000504842 SEMA3FQ13275 785 aa8.83□□□□□ -1
PROM1-205ENST00000504842 RETREG3Q86VR2 466 aa8.83□□□□□ -1
PROM1-205ENST00000504842 ALG2Q9H553 416 aa8.83□□□□□ -1
PROM1-205ENST00000504842 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.82□□□□□ -1
PROM1-205ENST00000504842 GPR37L1O60883 481 aa8.82□□□□□ -1
PROM1-205ENST00000504842 NR6A1Q15406 480 aa8.82□□□□□ -1
PROM1-205ENST00000504842 CFAP70Q5T0N1 1121 aa8.82□□□□□ -1
PROM1-205ENST00000504842 SYMPKQ92797 1274 aaKnown RBP8.82□□□□□ -1
PROM1-205ENST00000504842 USTQ9Y2C2 406 aa8.82□□□□□ -1
PROM1-205ENST00000504842 PALM3A6NDB9 673 aaPredicted RBP8.81□□□□□ -1
PROM1-205ENST00000504842 EPS8L1Q8TE68 723 aa8.81□□□□□ -1
PROM1-205ENST00000504842 PRR14Q9BWN1 585 aa8.81□□□□□ -1
PROM1-205ENST00000504842 LMOD1P29536 600 aaPredicted RBP8.8□□□□□ -1
PROM1-205ENST00000504842 EIF4G2P78344 907 aaKnown RBP eCLIP8.8□□□□□ -1
PROM1-205ENST00000504842 DESI1Q6ICB0 168 aa8.8□□□□□ -1
PROM1-205ENST00000504842 TRAF7Q6Q0C0 670 aa8.8□□□□□ -1
PROM1-205ENST00000504842 NKX2-3Q8TAU0 364 aa8.8□□□□□ -1
PROM1-205ENST00000504842 V9GY48 417 aaPredicted RBP8.8□□□□□ -1
PROM1-205ENST00000504842 MORN1Q5T089 497 aa8.79□□□□□ -1
PROM1-205ENST00000504842 TMCO4Q5TGY1 634 aa8.79□□□□□ -1
PROM1-205ENST00000504842 GZF1Q9H116 711 aaPredicted RBP8.79□□□□□ -1
PROM1-205ENST00000504842 PCDHB3Q9Y5E6 796 aa8.79□□□□□ -1
PROM1-205ENST00000504842 NRG2O14511 850 aaPredicted RBP8.78□□□□□ -1
PROM1-205ENST00000504842 ACTN4O43707 911 aaKnown RBP8.78□□□□□ -1
PROM1-205ENST00000504842 TFIP11Q9UBB9 837 aaKnown RBP8.78□□□□□ -1
PROM1-205ENST00000504842 PER1O15534 1290 aaPredicted RBP8.77□□□□□ -1.01
PROM1-205ENST00000504842 BRD1O95696 1058 aa8.77□□□□□ -1.01
PROM1-205ENST00000504842 PDZRN3Q9UPQ7 1066 aa8.77□□□□□ -1.01
PROM1-205ENST00000504842 SLC27A5Q9Y2P5 690 aa8.77□□□□□ -1.01
PROM1-205ENST00000504842 ZPR1O75312 459 aa8.76□□□□□ -1.01
PROM1-205ENST00000504842 SRPK2P78362 688 aaKnown RBP8.76□□□□□ -1.01
PROM1-205ENST00000504842 KCNA1Q09470 495 aa8.76□□□□□ -1.01
PROM1-205ENST00000504842 PUS10Q3MIT2 529 aaKnown RBP8.76□□□□□ -1.01
PROM1-205ENST00000504842 LYPD8Q6UX82 237 aa8.75□□□□□ -1.01
PROM1-205ENST00000504842 NR1H3Q13133 447 aa8.74□□□□□ -1.01
PROM1-205ENST00000504842 UCN2Q96RP3 112 aa8.74□□□□□ -1.01
PROM1-205ENST00000504842 BLOC1S3Q6QNY0 202 aa8.73□□□□□ -1.01
PROM1-205ENST00000504842 USB1Q9BQ65 265 aaKnown RBP8.73□□□□□ -1.01
PROM1-205ENST00000504842 MAFBQ9Y5Q3 323 aaPredicted RBP8.73□□□□□ -1.01
PROM1-205ENST00000504842 ATP9BO43861 1147 aa8.72□□□□□ -1.01
PROM1-205ENST00000504842 ATG7O95352 703 aa8.72□□□□□ -1.01
PROM1-205ENST00000504842 SALL2Q9Y467 1007 aaPredicted RBP8.72□□□□□ -1.01
PROM1-205ENST00000504842 ZBBXA8MT70 800 aa8.71□□□□□ -1.02
PROM1-205ENST00000504842 CDCA8Q53HL2 280 aa8.71□□□□□ -1.02
PROM1-205ENST00000504842 FKBPLQ9UIM3 349 aa8.71□□□□□ -1.02
PROM1-205ENST00000504842 ZC3H4Q9UPT8 1303 aaKnown RBP8.71□□□□□ -1.02
PROM1-205ENST00000504842 FMNL1O95466 1100 aaPredicted RBP8.7□□□□□ -1.02
PROM1-205ENST00000504842 MFAP1P55081 439 aaKnown RBP8.7□□□□□ -1.02
PROM1-205ENST00000504842 RNF19BQ6ZMZ0 732 aa8.7□□□□□ -1.02
PROM1-205ENST00000504842 TBC1D9Q6ZT07 1266 aa8.7□□□□□ -1.02
PROM1-205ENST00000504842 VRTNQ9H8Y1 702 aa8.7□□□□□ -1.02
PROM1-205ENST00000504842 TLL1O43897 1013 aa8.69□□□□□ -1.02
PROM1-205ENST00000504842 NR1I2O75469 434 aa8.69□□□□□ -1.02
PROM1-205ENST00000504842 SLC19A1P41440 591 aa8.69□□□□□ -1.02
PROM1-205ENST00000504842 BRICD5Q6PL45 260 aa8.69□□□□□ -1.02
PROM1-205ENST00000504842 ZNF592Q92610 1267 aa8.69□□□□□ -1.02
PROM1-205ENST00000504842 FBXO45P0C2W1 286 aa8.68□□□□□ -1.02
PROM1-205ENST00000504842 PTPRNQ16849 979 aa8.68□□□□□ -1.02
PROM1-205ENST00000504842 B4GALNT3Q6L9W6 998 aa8.68□□□□□ -1.02
PROM1-205ENST00000504842 RNF223E7ERA6 249 aa8.67□□□□□ -1.02
PROM1-205ENST00000504842 JUNDP17535 347 aa8.67□□□□□ -1.02
PROM1-205ENST00000504842 CTHP32929 405 aa8.67□□□□□ -1.02
PROM1-205ENST00000504842 ZNF787Q6DD87 383 aa8.67□□□□□ -1.02
PROM1-205ENST00000504842 SCUBE3Q8IX30 993 aa8.67□□□□□ -1.02
PROM1-205ENST00000504842 NFATC2IPQ8NCF5 419 aa8.67□□□□□ -1.02
PROM1-205ENST00000504842 LCE2BO14633 110 aa8.66□□□□□ -1.02
PROM1-205ENST00000504842 RGS22Q8NE09 1264 aa8.66□□□□□ -1.02
PROM1-205ENST00000504842 ARMC2Q8NEN0 867 aa8.66□□□□□ -1.02
PROM1-205ENST00000504842 CARNS1A5YM72 827 aa8.65□□□□□ -1.02
PROM1-205ENST00000504842 S1PR4O95977 384 aa8.65□□□□□ -1.02
PROM1-205ENST00000504842 F12P00748 615 aaPredicted RBP8.65□□□□□ -1.02
PROM1-205ENST00000504842 PKDCCQ504Y2 493 aa8.65□□□□□ -1.02
PROM1-205ENST00000504842 MTMR7Q9Y216 660 aa8.65□□□□□ -1.02
PROM1-205ENST00000504842 TMEM88BA6NKF7 163 aa8.64□□□□□ -1.03
PROM1-205ENST00000504842 PPEF1O14829 653 aaPredicted RBP8.64□□□□□ -1.03
PROM1-205ENST00000504842 SKIP12755 728 aa8.64□□□□□ -1.03
PROM1-205ENST00000504842 MCCD1P59942 119 aaPredicted RBP8.64□□□□□ -1.03
PROM1-205ENST00000504842 PTK2Q05397 1052 aa8.64□□□□□ -1.03
PROM1-205ENST00000504842 MAP10Q9P2G4 905 aa8.64□□□□□ -1.03
PROM1-205ENST00000504842 ELOAQ14241 798 aaKnown RBP8.63□□□□□ -1.03
PROM1-205ENST00000504842 GPKOWQ92917 476 aaPredicted RBP eCLIP8.63□□□□□ -1.03
PROM1-205ENST00000504842 THAP11Q96EK4 314 aa8.63□□□□□ -1.03
PROM1-205ENST00000504842 GPSM3Q9Y4H4 160 aa8.63□□□□□ -1.03
PROM1-205ENST00000504842 IVNS1ABPQ9Y6Y0 642 aa8.63□□□□□ -1.03
PROM1-205ENST00000504842 USP17L3A6NCW0 530 aa8.62□□□□□ -1.03
PROM1-205ENST00000504842 USP17L4A6NCW7 530 aa8.62□□□□□ -1.03
PROM1-205ENST00000504842 ADH1BP00325 375 aa8.62□□□□□ -1.03
PROM1-205ENST00000504842 CCNYL3P0C7X3 344 aa8.62□□□□□ -1.03
PROM1-205ENST00000504842 SLFNL1Q499Z3 407 aa8.62□□□□□ -1.03
PROM1-205ENST00000504842 KANK4Q5T7N3 995 aaPredicted RBP8.62□□□□□ -1.03
PROM1-205ENST00000504842 USP17L2Q6R6M4 530 aa8.62□□□□□ -1.03
PROM1-205ENST00000504842 USP17L1Q7RTZ2 530 aa8.62□□□□□ -1.03
PROM1-205ENST00000504842 PLEKHM2Q8IWE5 1019 aa8.62□□□□□ -1.03
PROM1-205ENST00000504842 ANKLE1Q8NAG6 615 aa8.62□□□□□ -1.03
PROM1-205ENST00000504842 USP17L5A8MUK1 530 aa8.61□□□□□ -1.03
PROM1-205ENST00000504842 PIK3CDO00329 1044 aa8.61□□□□□ -1.03
PROM1-205ENST00000504842 MSS51Q4VC12 460 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms