RNA–Protein interactions for RNA: ENST00000504634.5

NEDD9-209, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-209ENST00000504634 PSDA5PKW4 1024 aaPredicted RBP17.71■□□□□ 0.43
NEDD9-209ENST00000504634 TULP4Q9NRJ4 1543 aa17.71■□□□□ 0.43
NEDD9-209ENST00000504634 SPATA31A5Q5VU36 1347 aa17.71■□□□□ 0.42
NEDD9-209ENST00000504634 SPATA31A7Q8IWB4 1347 aa17.71■□□□□ 0.42
NEDD9-209ENST00000504634 BRWD3Q6RI45 1802 aa17.7■□□□□ 0.42
NEDD9-209ENST00000504634 ABCA3Q99758 1704 aa17.69■□□□□ 0.42
NEDD9-209ENST00000504634 EN1Q05925 392 aaPredicted RBP17.69■□□□□ 0.42
NEDD9-209ENST00000504634 FAM182BQ5T319 152 aa17.69■□□□□ 0.42
NEDD9-209ENST00000504634 NUDT16Q96DE0 195 aaKnown RBP17.69■□□□□ 0.42
NEDD9-209ENST00000504634 COL14A1Q05707 1796 aaKnown RBP17.66■□□□□ 0.42
NEDD9-209ENST00000504634 CHRNA2Q15822 529 aa17.66■□□□□ 0.42
NEDD9-209ENST00000504634 NUTM2GQ5VZR2 741 aa17.66■□□□□ 0.42
NEDD9-209ENST00000504634 STRN4Q9NRL3 753 aa17.66■□□□□ 0.42
NEDD9-209ENST00000504634 TRPM3Q9HCF6 1732 aaPredicted RBP17.66■□□□□ 0.42
NEDD9-209ENST00000504634 KIAA0232Q92628 1395 aa17.66■□□□□ 0.42
NEDD9-209ENST00000504634 HRCP23327 699 aa17.65■□□□□ 0.42
NEDD9-209ENST00000504634 CDK19Q9BWU1 502 aa17.65■□□□□ 0.42
NEDD9-209ENST00000504634 NRAPQ86VF7 1730 aa17.64■□□□□ 0.41
NEDD9-209ENST00000504634 EVA1CP58658 441 aa17.64■□□□□ 0.41
NEDD9-209ENST00000504634 ZC3H6P61129 1189 aaKnown RBP17.64■□□□□ 0.41
NEDD9-209ENST00000504634 SPATA31A1Q5TZJ5 1347 aa17.64■□□□□ 0.41
NEDD9-209ENST00000504634 ALS2Q96Q42 1657 aa17.64■□□□□ 0.41
NEDD9-209ENST00000504634 R3HDM1Q15032 1099 aaKnown RBP17.63■□□□□ 0.41
NEDD9-209ENST00000504634 USP35Q9P2H5 1018 aa17.63■□□□□ 0.41
NEDD9-209ENST00000504634 FAM196AQ6ZSG2 479 aa17.62■□□□□ 0.41
NEDD9-209ENST00000504634 ATP7BP35670 1465 aa17.62■□□□□ 0.41
NEDD9-209ENST00000504634 NBPF8Q3BBV2 869 aa17.61■□□□□ 0.41
NEDD9-209ENST00000504634 CCDC61Q9Y6R9 512 aa17.61■□□□□ 0.41
NEDD9-209ENST00000504634 ACEP12821 1306 aa17.61■□□□□ 0.41
NEDD9-209ENST00000504634 TRIM37O94972 964 aa17.6■□□□□ 0.41
NEDD9-209ENST00000504634 PDE3BQ13370 1112 aa17.6■□□□□ 0.41
NEDD9-209ENST00000504634 ABTB2Q8N961 1025 aa17.6■□□□□ 0.41
NEDD9-209ENST00000504634 EZH2Q15910 746 aaKnown RBP17.59■□□□□ 0.41
NEDD9-209ENST00000504634 APBA3O96018 575 aa17.58■□□□□ 0.4
NEDD9-209ENST00000504634 LRP5O75197 1615 aa17.58■□□□□ 0.4
NEDD9-209ENST00000504634 DISP2A7MBM2 1401 aa17.57■□□□□ 0.4
NEDD9-209ENST00000504634 POLR3AO14802 1390 aaPredicted RBP17.57■□□□□ 0.4
NEDD9-209ENST00000504634 PLEKHG3A1L390 1219 aa17.57■□□□□ 0.4
NEDD9-209ENST00000504634 SRPK2P78362 688 aaKnown RBP17.57■□□□□ 0.4
NEDD9-209ENST00000504634 THSD7AQ9UPZ6 1657 aa17.56■□□□□ 0.4
NEDD9-209ENST00000504634 LARP1Q6PKG0 1096 aaKnown RBP17.55■□□□□ 0.4
NEDD9-209ENST00000504634 BARGINQ6ZT62 677 aa17.55■□□□□ 0.4
NEDD9-209ENST00000504634 TCP11L2Q8N4U5 519 aa17.55■□□□□ 0.4
NEDD9-209ENST00000504634 CAMKK2Q96RR4 588 aa17.55■□□□□ 0.4
NEDD9-209ENST00000504634 RGPD1P0DJD0 1748 aa17.55■□□□□ 0.4
NEDD9-209ENST00000504634 SSH2Q76I76 1423 aa17.55■□□□□ 0.4
NEDD9-209ENST00000504634 NLRP13Q86W25 1043 aa17.54■□□□□ 0.4
NEDD9-209ENST00000504634 ITSN1Q15811 1721 aa17.54■□□□□ 0.4
NEDD9-209ENST00000504634 ARHGEF28Q8N1W1 1705 aaKnown RBP17.53■□□□□ 0.4
NEDD9-209ENST00000504634 CRYBG1Q9Y4K1 1723 aa17.53■□□□□ 0.4
NEDD9-209ENST00000504634 NBPF1Q3BBV0 1214 aa17.53■□□□□ 0.4
NEDD9-209ENST00000504634 PARD3Q8TEW0 1356 aa17.53■□□□□ 0.4
NEDD9-209ENST00000504634 ZBTB7CA1YPR0 619 aa17.52■□□□□ 0.4
NEDD9-209ENST00000504634 GCP02774 474 aa17.52■□□□□ 0.4
NEDD9-209ENST00000504634 CPDO75976 1380 aa17.52■□□□□ 0.39
NEDD9-209ENST00000504634 NBPF14Q5TI25 921 aa17.51■□□□□ 0.39
NEDD9-209ENST00000504634 CABP2Q9NPB3 220 aa17.51■□□□□ 0.39
NEDD9-209ENST00000504634 USP19O94966 1318 aa17.5■□□□□ 0.39
NEDD9-209ENST00000504634 CENPJQ9HC77 1338 aaPredicted RBP17.5■□□□□ 0.39
NEDD9-209ENST00000504634 PPIP5K1Q6PFW1 1433 aa17.5■□□□□ 0.39
NEDD9-209ENST00000504634 THRAP3Q9Y2W1 955 aaKnown RBP17.5■□□□□ 0.39
NEDD9-209ENST00000504634 PHRF1Q9P1Y6 1649 aaKnown RBP17.5■□□□□ 0.39
NEDD9-209ENST00000504634 CAMTA1Q9Y6Y1 1673 aa17.48■□□□□ 0.39
NEDD9-209ENST00000504634 NLRP6P59044 892 aa17.47■□□□□ 0.39
NEDD9-209ENST00000504634 CABP1Q9NZU7 370 aa17.47■□□□□ 0.39
NEDD9-209ENST00000504634 TNS1Q9HBL0 1735 aaKnown RBP17.47■□□□□ 0.39
NEDD9-209ENST00000504634 NRKQ7Z2Y5 1582 aa17.46■□□□□ 0.39
NEDD9-209ENST00000504634 TOPAZ1Q8N9V7 1692 aa17.45■□□□□ 0.38
NEDD9-209ENST00000504634 BRD4O60885 1362 aaPredicted RBP17.45■□□□□ 0.38
NEDD9-209ENST00000504634 C11orf95C9JLR9 678 aaPredicted RBP17.45■□□□□ 0.38
NEDD9-209ENST00000504634 TOM1L2Q6ZVM7 507 aa17.44■□□□□ 0.38
NEDD9-209ENST00000504634 COL5A2P05997 1499 aaPredicted RBP17.44■□□□□ 0.38
NEDD9-209ENST00000504634 CRB1P82279 1406 aa17.43■□□□□ 0.38
NEDD9-209ENST00000504634 KIAA1210Q9ULL0 1709 aa17.42■□□□□ 0.38
NEDD9-209ENST00000504634 DDB1Q16531 1140 aa17.42■□□□□ 0.38
NEDD9-209ENST00000504634 PPP1R1BQ9UD71 204 aaPredicted RBP17.42■□□□□ 0.38
NEDD9-209ENST00000504634 AATKQ6ZMQ8 1374 aa17.41■□□□□ 0.38
NEDD9-209ENST00000504634 USP6P35125 1406 aa17.41■□□□□ 0.38
NEDD9-209ENST00000504634 EVC2Q86UK5 1308 aa17.41■□□□□ 0.38
NEDD9-209ENST00000504634 OVOS2A0A0G2JMS6 1433 aa17.4■□□□□ 0.38
NEDD9-209ENST00000504634 OVOS2A0A0J9YW53 1432 aa17.4■□□□□ 0.38
NEDD9-209ENST00000504634 OVOS2Q6IE36 1432 aa17.4■□□□□ 0.38
NEDD9-209ENST00000504634 LMO7Q8WWI1 1683 aa17.4■□□□□ 0.38
NEDD9-209ENST00000504634 SPON1Q9HCB6 807 aa17.4■□□□□ 0.38
NEDD9-209ENST00000504634 SOX12O15370 315 aa17.38■□□□□ 0.37
NEDD9-209ENST00000504634 CSB-PGBD3P0DP91 1061 aa17.38■□□□□ 0.37
NEDD9-209ENST00000504634 L3MBTL2Q969R5 705 aa17.38■□□□□ 0.37
NEDD9-209ENST00000504634 DCAF8L1A6NGE4 600 aa17.37■□□□□ 0.37
NEDD9-209ENST00000504634 KCNQ2O43526 872 aa17.37■□□□□ 0.37
NEDD9-209ENST00000504634 ZNF692Q9BU19 519 aaPredicted RBP17.37■□□□□ 0.37
NEDD9-209ENST00000504634 KCNH5Q8NCM2 988 aa17.36■□□□□ 0.37
NEDD9-209ENST00000504634 CDCA7Q9BWT1 371 aaPredicted RBP17.36■□□□□ 0.37
NEDD9-209ENST00000504634 BCL11BQ9C0K0 894 aaPredicted RBP17.36■□□□□ 0.37
NEDD9-209ENST00000504634 WDR17Q8IZU2 1322 aa17.36■□□□□ 0.37
NEDD9-209ENST00000504634 PLSCR1O15162 318 aa17.35■□□□□ 0.37
NEDD9-209ENST00000504634 AXIN2Q9Y2T1 843 aa17.35■□□□□ 0.37
NEDD9-209ENST00000504634 TTC21BQ7Z4L5 1316 aa17.35■□□□□ 0.37
NEDD9-209ENST00000504634 SLIT3O75094 1523 aa17.34■□□□□ 0.37
NEDD9-209ENST00000504634 YY1P25490 414 aa17.34■□□□□ 0.37
NEDD9-209ENST00000504634 RREB1Q92766 1687 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms