RNA–Protein interactions for RNA: ENST00000504443.6

COL6A4P2-202, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

BASIC

Gene COL6A4P2, Length 2,753 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-202ENST00000504443 LMBRD1Q9NUN5 540 aa17.54■□□□□ 0.4
COL6A4P2-202ENST00000504443 MYOM1P52179 1685 aa17.54■□□□□ 0.4
COL6A4P2-202ENST00000504443 PTMAP06454 111 aaKnown RBP17.54■□□□□ 0.4
COL6A4P2-202ENST00000504443 C17orf53Q8N3J3 647 aaPredicted RBP17.54■□□□□ 0.4
COL6A4P2-202ENST00000504443 SYCE3A1L190 88 aa17.53■□□□□ 0.4
COL6A4P2-202ENST00000504443 AK9Q5TCS8 1911 aa17.53■□□□□ 0.4
COL6A4P2-202ENST00000504443 RNF17Q9BXT8 1623 aaKnown RBP17.53■□□□□ 0.4
COL6A4P2-202ENST00000504443 NPC1L1Q9UHC9 1359 aa17.53■□□□□ 0.4
COL6A4P2-202ENST00000504443 FOXD4L5Q5VV16 416 aaPredicted RBP17.52■□□□□ 0.4
COL6A4P2-202ENST00000504443 ZKSCAN2Q63HK3 967 aa17.52■□□□□ 0.4
COL6A4P2-202ENST00000504443 NGEFQ8N5V2 710 aa17.52■□□□□ 0.4
COL6A4P2-202ENST00000504443 FOXD4L4Q8WXT5 416 aaPredicted RBP17.52■□□□□ 0.4
COL6A4P2-202ENST00000504443 GPT2Q8TD30 523 aa17.52■□□□□ 0.4
COL6A4P2-202ENST00000504443 NSFL1CQ9UNZ2 370 aaKnown RBP17.52■□□□□ 0.4
COL6A4P2-202ENST00000504443 IBTKQ9P2D0 1353 aaPredicted RBP17.52■□□□□ 0.4
COL6A4P2-202ENST00000504443 CDCA8Q53HL2 280 aa17.51■□□□□ 0.39
COL6A4P2-202ENST00000504443 CCDC39Q9UFE4 941 aa17.51■□□□□ 0.39
COL6A4P2-202ENST00000504443 NPM1P06748 294 aaKnown RBP eCLIP17.51■□□□□ 0.39
COL6A4P2-202ENST00000504443 MYRIPQ8NFW9 859 aa17.51■□□□□ 0.39
COL6A4P2-202ENST00000504443 TSR2Q969E8 191 aaKnown RBP17.51■□□□□ 0.39
COL6A4P2-202ENST00000504443 TMEM51Q9NW97 253 aa17.51■□□□□ 0.39
COL6A4P2-202ENST00000504443 TRIM27P14373 513 aa17.51■□□□□ 0.39
COL6A4P2-202ENST00000504443 HDAC1Q13547 482 aaPredicted RBP17.51■□□□□ 0.39
COL6A4P2-202ENST00000504443 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.5■□□□□ 0.39
COL6A4P2-202ENST00000504443 MAPK8IP2Q13387 824 aaPredicted RBP17.5■□□□□ 0.39
COL6A4P2-202ENST00000504443 RUNDC1Q96C34 613 aa17.5■□□□□ 0.39
COL6A4P2-202ENST00000504443 PHF23Q9BUL5 403 aaPredicted RBP17.5■□□□□ 0.39
COL6A4P2-202ENST00000504443 TMEM63CQ9P1W3 806 aa17.49■□□□□ 0.39
COL6A4P2-202ENST00000504443 PLCD3Q8N3E9 789 aa17.49■□□□□ 0.39
COL6A4P2-202ENST00000504443 GTPBP4Q9BZE4 634 aaKnown RBP17.49■□□□□ 0.39
COL6A4P2-202ENST00000504443 SCAPERQ9BY12 1400 aa17.48■□□□□ 0.39
COL6A4P2-202ENST00000504443 ZCCHC11Q5TAX3 1644 aaKnown RBP17.47■□□□□ 0.39
COL6A4P2-202ENST00000504443 KIAA2012Q0VF49 1180 aa17.47■□□□□ 0.39
COL6A4P2-202ENST00000504443 SMC4Q9NTJ3 1288 aa17.47■□□□□ 0.39
COL6A4P2-202ENST00000504443 IQGAP1P46940 1657 aa17.47■□□□□ 0.39
COL6A4P2-202ENST00000504443 MCM5P33992 734 aa17.47■□□□□ 0.39
COL6A4P2-202ENST00000504443 KIF20AO95235 890 aa17.46■□□□□ 0.39
COL6A4P2-202ENST00000504443 CLEC17AQ6ZS10 378 aa17.46■□□□□ 0.39
COL6A4P2-202ENST00000504443 WDR63Q8IWG1 891 aa17.46■□□□□ 0.39
COL6A4P2-202ENST00000504443 CGNQ9P2M7 1197 aaKnown RBP17.46■□□□□ 0.39
COL6A4P2-202ENST00000504443 POLR3AO14802 1390 aaPredicted RBP17.46■□□□□ 0.39
COL6A4P2-202ENST00000504443 TBC1D9Q6ZT07 1266 aa17.46■□□□□ 0.39
COL6A4P2-202ENST00000504443 IQSEC2Q5JU85 1478 aa17.46■□□□□ 0.38
COL6A4P2-202ENST00000504443 SCAF11Q99590 1463 aaKnown RBP17.45■□□□□ 0.38
COL6A4P2-202ENST00000504443 PDIA4P13667 645 aaKnown RBP17.45■□□□□ 0.38
COL6A4P2-202ENST00000504443 TMEM57Q8N5G2 664 aa17.45■□□□□ 0.38
COL6A4P2-202ENST00000504443 KIF16BQ96L93 1317 aa17.45■□□□□ 0.38
COL6A4P2-202ENST00000504443 LETM1O95202 739 aaPredicted RBP17.45■□□□□ 0.38
COL6A4P2-202ENST00000504443 NUCB1Q02818 461 aa17.45■□□□□ 0.38
COL6A4P2-202ENST00000504443 ANKRD45Q5TZF3 282 aa17.44■□□□□ 0.38
COL6A4P2-202ENST00000504443 LRSAM1Q6UWE0 723 aa17.44■□□□□ 0.38
COL6A4P2-202ENST00000504443 ZGPATQ8N5A5 531 aaKnown RBP17.44■□□□□ 0.38
COL6A4P2-202ENST00000504443 SSH1Q8WYL5 1049 aa17.44■□□□□ 0.38
COL6A4P2-202ENST00000504443 TTC37Q6PGP7 1564 aa17.44■□□□□ 0.38
COL6A4P2-202ENST00000504443 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.44■□□□□ 0.38
COL6A4P2-202ENST00000504443 U2AF2P26368 475 aaKnown RBP eCLIP17.44■□□□□ 0.38
COL6A4P2-202ENST00000504443 CHD1LQ86WJ1 897 aa17.44■□□□□ 0.38
COL6A4P2-202ENST00000504443 AFAP1Q8N556 730 aa17.43■□□□□ 0.38
COL6A4P2-202ENST00000504443 SHPRHQ149N8 1683 aa17.43■□□□□ 0.38
COL6A4P2-202ENST00000504443 MADDQ8WXG6 1647 aa17.43■□□□□ 0.38
COL6A4P2-202ENST00000504443 EXOSC9Q06265 439 aaKnown RBP17.43■□□□□ 0.38
COL6A4P2-202ENST00000504443 TTC12Q9H892 705 aaPredicted RBP17.43■□□□□ 0.38
COL6A4P2-202ENST00000504443 DDX19BQ9UMR2 479 aa17.43■□□□□ 0.38
COL6A4P2-202ENST00000504443 TPRNQ4KMQ1 711 aa17.42■□□□□ 0.38
COL6A4P2-202ENST00000504443 BCL2L12Q9HB09 334 aa17.42■□□□□ 0.38
COL6A4P2-202ENST00000504443 NOB1Q9ULX3 412 aaKnown RBP17.42■□□□□ 0.38
COL6A4P2-202ENST00000504443 ZBTB40Q9NUA8 1239 aa17.41■□□□□ 0.38
COL6A4P2-202ENST00000504443 ARHGAP5Q13017 1502 aa17.41■□□□□ 0.38
COL6A4P2-202ENST00000504443 NOLC1Q14978 699 aaKnown RBP eCLIP17.41■□□□□ 0.38
COL6A4P2-202ENST00000504443 ATF7IPQ6VMQ6 1270 aa17.41■□□□□ 0.38
COL6A4P2-202ENST00000504443 ASXL2Q76L83 1435 aa17.41■□□□□ 0.38
COL6A4P2-202ENST00000504443 MORC1Q86VD1 984 aa17.4■□□□□ 0.38
COL6A4P2-202ENST00000504443 KIF3AQ9Y496 699 aa17.4■□□□□ 0.38
COL6A4P2-202ENST00000504443 ARHGEF5Q12774 1597 aa17.4■□□□□ 0.38
COL6A4P2-202ENST00000504443 CEP152O94986 1710 aa17.4■□□□□ 0.38
COL6A4P2-202ENST00000504443 FOXD4L6Q3SYB3 417 aaPredicted RBP17.4■□□□□ 0.38
COL6A4P2-202ENST00000504443 BMP2KLQ5H9B9 411 aa17.4■□□□□ 0.38
COL6A4P2-202ENST00000504443 FOXD4L3Q6VB84 417 aaPredicted RBP17.4■□□□□ 0.38
COL6A4P2-202ENST00000504443 C1orf115Q9H7X2 142 aa17.4■□□□□ 0.38
COL6A4P2-202ENST00000504443 NUCB2P80303 420 aa17.4■□□□□ 0.38
COL6A4P2-202ENST00000504443 ZNF771Q7L3S4 317 aaPredicted RBP17.4■□□□□ 0.38
COL6A4P2-202ENST00000504443 PDCL2Q8N4E4 241 aa17.4■□□□□ 0.38
COL6A4P2-202ENST00000504443 ZDHHC9Q9Y397 364 aa17.4■□□□□ 0.38
COL6A4P2-202ENST00000504443 UNC13BO14795 1591 aa17.39■□□□□ 0.37
COL6A4P2-202ENST00000504443 SAMD9LQ8IVG5 1584 aa17.39■□□□□ 0.37
COL6A4P2-202ENST00000504443 KDM5AP29375 1690 aaKnown RBP17.38■□□□□ 0.37
COL6A4P2-202ENST00000504443 CYP2E1P05181 493 aaPredicted RBP17.38■□□□□ 0.37
COL6A4P2-202ENST00000504443 MTHFSP49914 203 aa17.38■□□□□ 0.37
COL6A4P2-202ENST00000504443 UHRF1BP1LA0JNW5 1464 aa17.38■□□□□ 0.37
COL6A4P2-202ENST00000504443 ERVK-7P63135 1459 aa17.38■□□□□ 0.37
COL6A4P2-202ENST00000504443 AEBP2Q6ZN18 517 aaPredicted RBP17.37■□□□□ 0.37
COL6A4P2-202ENST00000504443 PRIMPOLQ96LW4 560 aa17.37■□□□□ 0.37
COL6A4P2-202ENST00000504443 EFCAB2Q5VUJ9 269 aa17.37■□□□□ 0.37
COL6A4P2-202ENST00000504443 CDC42BPBQ9Y5S2 1711 aa17.37■□□□□ 0.37
COL6A4P2-202ENST00000504443 KANK1Q14678 1352 aa17.37■□□□□ 0.37
COL6A4P2-202ENST00000504443 CCDC27Q2M243 656 aa17.36■□□□□ 0.37
COL6A4P2-202ENST00000504443 IQGAP3Q86VI3 1631 aa17.35■□□□□ 0.37
COL6A4P2-202ENST00000504443 HMGN5P82970 282 aaKnown RBP17.35■□□□□ 0.37
COL6A4P2-202ENST00000504443 ARHGAP31Q2M1Z3 1444 aa17.35■□□□□ 0.37
COL6A4P2-202ENST00000504443 U2AF1L5P0DN76 240 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms