RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 ACIN1Q9UKV3 1341 aaKnown RBP23.4■■□□□ 1.34
DDR1-250ENST00000503628 DLC1Q96QB1 1528 aa23.4■■□□□ 1.34
DDR1-250ENST00000503628 TNS1Q9HBL0 1735 aaKnown RBP23.4■■□□□ 1.34
DDR1-250ENST00000503628 DISP2A7MBM2 1401 aa23.39■■□□□ 1.33
DDR1-250ENST00000503628 ADGRB2O60241 1585 aa23.39■■□□□ 1.33
DDR1-250ENST00000503628 THSD7AQ9UPZ6 1657 aa23.38■■□□□ 1.33
DDR1-250ENST00000503628 PRR36Q9H6K5 1346 aa23.38■■□□□ 1.33
DDR1-250ENST00000503628 TRAK1Q9UPV9 953 aa23.38■■□□□ 1.33
DDR1-250ENST00000503628 MINK1Q8N4C8 1332 aaPredicted RBP23.37■■□□□ 1.33
DDR1-250ENST00000503628 PAK3O75914 559 aaPredicted RBP23.37■■□□□ 1.33
DDR1-250ENST00000503628 PRDM11Q9NQV5 511 aa23.37■■□□□ 1.33
DDR1-250ENST00000503628 TRIM37O94972 964 aa23.36■■□□□ 1.33
DDR1-250ENST00000503628 CAMKK2Q96RR4 588 aa23.36■■□□□ 1.33
DDR1-250ENST00000503628 CRYBG1Q9Y4K1 1723 aa23.36■■□□□ 1.33
DDR1-250ENST00000503628 NGDNQ8NEJ9 315 aaKnown RBP23.35■■□□□ 1.33
DDR1-250ENST00000503628 SPATA31A1Q5TZJ5 1347 aa23.33■■□□□ 1.33
DDR1-250ENST00000503628 WASLO00401 505 aaPredicted RBP23.33■■□□□ 1.33
DDR1-250ENST00000503628 FAM196AQ6ZSG2 479 aa23.33■■□□□ 1.33
DDR1-250ENST00000503628 ADGRB1O14514 1584 aa23.32■■□□□ 1.32
DDR1-250ENST00000503628 EIF3AQ14152 1382 aaKnown RBP23.32■■□□□ 1.32
DDR1-250ENST00000503628 CHRNA2Q15822 529 aa23.32■■□□□ 1.32
DDR1-250ENST00000503628 TULP4Q9NRJ4 1543 aa23.32■■□□□ 1.32
DDR1-250ENST00000503628 APBA3O96018 575 aa23.31■■□□□ 1.32
DDR1-250ENST00000503628 STRN4Q9NRL3 753 aa23.31■■□□□ 1.32
DDR1-250ENST00000503628 KIAA0232Q92628 1395 aa23.3■■□□□ 1.32
DDR1-250ENST00000503628 ZC3H6P61129 1189 aaKnown RBP23.27■■□□□ 1.32
DDR1-250ENST00000503628 USP35Q9P2H5 1018 aa23.27■■□□□ 1.32
DDR1-250ENST00000503628 KDM2AQ9Y2K7 1162 aa23.26■■□□□ 1.31
DDR1-250ENST00000503628 PARD3Q8TEW0 1356 aa23.26■■□□□ 1.31
DDR1-250ENST00000503628 NUTM2GQ5VZR2 741 aa23.24■■□□□ 1.31
DDR1-250ENST00000503628 PHRF1Q9P1Y6 1649 aaKnown RBP23.23■■□□□ 1.31
DDR1-250ENST00000503628 YY1P25490 414 aa23.23■■□□□ 1.31
DDR1-250ENST00000503628 EVA1CP58658 441 aa23.23■■□□□ 1.31
DDR1-250ENST00000503628 PDE3BQ13370 1112 aa23.23■■□□□ 1.31
DDR1-250ENST00000503628 NUDT16Q96DE0 195 aaKnown RBP23.23■■□□□ 1.31
DDR1-250ENST00000503628 RREB1Q92766 1687 aa23.22■■□□□ 1.31
DDR1-250ENST00000503628 NBPF8Q3BBV2 869 aa23.21■■□□□ 1.31
DDR1-250ENST00000503628 NBPF14Q5TI25 921 aa23.21■■□□□ 1.31
DDR1-250ENST00000503628 BARGINQ6ZT62 677 aa23.21■■□□□ 1.31
DDR1-250ENST00000503628 DCAF11Q8TEB1 546 aa23.21■■□□□ 1.31
DDR1-250ENST00000503628 ITSN1Q15811 1721 aa23.21■■□□□ 1.31
DDR1-250ENST00000503628 NUP188Q5SRE5 1749 aa23.2■■□□□ 1.3
DDR1-250ENST00000503628 ATP7BP35670 1465 aa23.19■■□□□ 1.3
DDR1-250ENST00000503628 SSH2Q76I76 1423 aa23.18■■□□□ 1.3
DDR1-250ENST00000503628 LARP1Q6PKG0 1096 aaKnown RBP23.18■■□□□ 1.3
DDR1-250ENST00000503628 CAMTA1Q9Y6Y1 1673 aa23.16■■□□□ 1.3
DDR1-250ENST00000503628 TCP11L2Q8N4U5 519 aa23.16■■□□□ 1.3
DDR1-250ENST00000503628 CDK19Q9BWU1 502 aa23.15■■□□□ 1.3
DDR1-250ENST00000503628 PPP1R1BQ9UD71 204 aaPredicted RBP23.15■■□□□ 1.3
DDR1-250ENST00000503628 ARHGEF28Q8N1W1 1705 aaKnown RBP23.15■■□□□ 1.3
DDR1-250ENST00000503628 ACEP12821 1306 aa23.14■■□□□ 1.3
DDR1-250ENST00000503628 SPON1Q9HCB6 807 aa23.14■■□□□ 1.29
DDR1-250ENST00000503628 KCNQ2O43526 872 aa23.13■■□□□ 1.29
DDR1-250ENST00000503628 POLR3AO14802 1390 aaPredicted RBP23.13■■□□□ 1.29
DDR1-250ENST00000503628 ABTB2Q8N961 1025 aa23.12■■□□□ 1.29
DDR1-250ENST00000503628 CCDC61Q9Y6R9 512 aa23.11■■□□□ 1.29
DDR1-250ENST00000503628 NRKQ7Z2Y5 1582 aa23.1■■□□□ 1.29
DDR1-250ENST00000503628 LMO7Q8WWI1 1683 aa23.1■■□□□ 1.29
DDR1-250ENST00000503628 STAC3Q96MF2 364 aa23.1■■□□□ 1.29
DDR1-250ENST00000503628 THRAP3Q9Y2W1 955 aaKnown RBP23.1■■□□□ 1.29
DDR1-250ENST00000503628 CPDO75976 1380 aa23.1■■□□□ 1.29
DDR1-250ENST00000503628 PLEKHG3A1L390 1219 aa23.09■■□□□ 1.29
DDR1-250ENST00000503628 RAB3GAP2Q9H2M9 1393 aa23.09■■□□□ 1.29
DDR1-250ENST00000503628 DCAF8L1A6NGE4 600 aa23.08■■□□□ 1.29
DDR1-250ENST00000503628 TOPAZ1Q8N9V7 1692 aa23.08■■□□□ 1.29
DDR1-250ENST00000503628 PARP4Q9UKK3 1724 aaKnown RBP23.07■■□□□ 1.28
DDR1-250ENST00000503628 USP19O94966 1318 aa23.07■■□□□ 1.28
DDR1-250ENST00000503628 GCP02774 474 aa23.06■■□□□ 1.28
DDR1-250ENST00000503628 NINLQ9Y2I6 1382 aa23.05■■□□□ 1.28
DDR1-250ENST00000503628 NLRP13Q86W25 1043 aa23.05■■□□□ 1.28
DDR1-250ENST00000503628 C11orf95C9JLR9 678 aaPredicted RBP23.04■■□□□ 1.28
DDR1-250ENST00000503628 COL5A2P05997 1499 aaPredicted RBP23.03■■□□□ 1.28
DDR1-250ENST00000503628 PLSCR1O15162 318 aa23.02■■□□□ 1.28
DDR1-250ENST00000503628 SBF2Q86WG5 1849 aa23.02■■□□□ 1.28
DDR1-250ENST00000503628 PEAK1Q9H792 1746 aa23.02■■□□□ 1.28
DDR1-250ENST00000503628 OVOS2A0A0G2JMS6 1433 aa23■■□□□ 1.27
DDR1-250ENST00000503628 OVOS2A0A0J9YW53 1432 aa23■■□□□ 1.27
DDR1-250ENST00000503628 CRB1P82279 1406 aa23■■□□□ 1.27
DDR1-250ENST00000503628 OVOS2Q6IE36 1432 aa23■■□□□ 1.27
DDR1-250ENST00000503628 ZBTB7CA1YPR0 619 aa23■■□□□ 1.27
DDR1-250ENST00000503628 ANO8Q9HCE9 1232 aaPredicted RBP23■■□□□ 1.27
DDR1-250ENST00000503628 PTF1AQ7RTS3 328 aa22.99■■□□□ 1.27
DDR1-250ENST00000503628 RGPD3A6NKT7 1758 aaPredicted RBP22.99■■□□□ 1.27
DDR1-250ENST00000503628 RGPD4Q7Z3J3 1758 aa22.99■■□□□ 1.27
DDR1-250ENST00000503628 DDB1Q16531 1140 aa22.98■■□□□ 1.27
DDR1-250ENST00000503628 PDGFDQ9GZP0 370 aaPredicted RBP22.98■■□□□ 1.27
DDR1-250ENST00000503628 PPIP5K1Q6PFW1 1433 aa22.97■■□□□ 1.27
DDR1-250ENST00000503628 CASZ1Q86V15 1759 aa22.96■■□□□ 1.27
DDR1-250ENST00000503628 SRPK2P78362 688 aaKnown RBP22.96■■□□□ 1.27
DDR1-250ENST00000503628 PROM2Q8N271 834 aa22.96■■□□□ 1.27
DDR1-250ENST00000503628 BCL11BQ9C0K0 894 aaPredicted RBP22.96■■□□□ 1.27
DDR1-250ENST00000503628 LRRC37A3O60309 1634 aa22.95■■□□□ 1.26
DDR1-250ENST00000503628 AATKQ6ZMQ8 1374 aa22.94■■□□□ 1.26
DDR1-250ENST00000503628 ZBTB7AO95365 584 aa22.94■■□□□ 1.26
DDR1-250ENST00000503628 NLRP6P59044 892 aa22.94■■□□□ 1.26
DDR1-250ENST00000503628 TOM1L2Q6ZVM7 507 aa22.94■■□□□ 1.26
DDR1-250ENST00000503628 CABP2Q9NPB3 220 aa22.94■■□□□ 1.26
DDR1-250ENST00000503628 NBPF1Q3BBV0 1214 aa22.93■■□□□ 1.26
DDR1-250ENST00000503628 MARCH10Q8NA82 808 aaPredicted RBP22.92■■□□□ 1.26
DDR1-250ENST00000503628 KIAA1210Q9ULL0 1709 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms