RNA–Protein interactions for RNA: ENST00000503565.5

SCLT1-206, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 5

Gene SCLT1, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-206ENST00000503565 CCDC24Q8N4L8 307 aa8.66□□□□□ -1.02
SCLT1-206ENST00000503565 CCDC97Q96F63 343 aaPredicted RBP8.66□□□□□ -1.02
SCLT1-206ENST00000503565 MTMR14Q8NCE2 650 aa8.65□□□□□ -1.02
SCLT1-206ENST00000503565 EVA1BQ9NVM1 165 aa8.65□□□□□ -1.02
SCLT1-206ENST00000503565 F12P00748 615 aaPredicted RBP8.64□□□□□ -1.03
SCLT1-206ENST00000503565 CCNYL3P0C7X3 344 aa8.64□□□□□ -1.03
SCLT1-206ENST00000503565 CTDSPL2Q05D32 466 aa8.64□□□□□ -1.03
SCLT1-206ENST00000503565 TMEM259Q4ZIN3 620 aa8.64□□□□□ -1.03
SCLT1-206ENST00000503565 PKD2L1Q9P0L9 805 aa8.64□□□□□ -1.03
SCLT1-206ENST00000503565 ZBTB7CA1YPR0 619 aa8.63□□□□□ -1.03
SCLT1-206ENST00000503565 GDF9O60383 454 aa8.63□□□□□ -1.03
SCLT1-206ENST00000503565 SKOR1P84550 965 aa8.63□□□□□ -1.03
SCLT1-206ENST00000503565 ZNF697Q5TEC3 545 aa8.63□□□□□ -1.03
SCLT1-206ENST00000503565 KCNH2Q12809 1159 aa8.62□□□□□ -1.03
SCLT1-206ENST00000503565 TRIM32Q13049 653 aa8.62□□□□□ -1.03
SCLT1-206ENST00000503565 MAP10Q9P2G4 905 aa8.62□□□□□ -1.03
SCLT1-206ENST00000503565 ZNF330Q9Y3S2 320 aaPredicted RBP8.62□□□□□ -1.03
SCLT1-206ENST00000503565 RANGAP1P46060 587 aaPredicted RBP8.61□□□□□ -1.03
SCLT1-206ENST00000503565 TRAIPQ9BWF2 469 aa8.61□□□□□ -1.03
SCLT1-206ENST00000503565 GDPD2Q9HCC8 539 aa8.61□□□□□ -1.03
SCLT1-206ENST00000503565 LRRN4Q8WUT4 740 aa8.6□□□□□ -1.03
SCLT1-206ENST00000503565 TSC1Q92574 1164 aa8.6□□□□□ -1.03
SCLT1-206ENST00000503565 CD2BP2O95400 341 aaKnown RBP8.59□□□□□ -1.03
SCLT1-206ENST00000503565 NPM2Q86SE8 214 aaKnown RBP8.59□□□□□ -1.03
SCLT1-206ENST00000503565 IRX2Q9BZI1 471 aaPredicted RBP8.59□□□□□ -1.03
SCLT1-206ENST00000503565 UNC93B1Q9H1C4 597 aa8.59□□□□□ -1.03
SCLT1-206ENST00000503565 LCE2BO14633 110 aa8.58□□□□□ -1.04
SCLT1-206ENST00000503565 ZBTB24O43167 697 aaPredicted RBP8.58□□□□□ -1.04
SCLT1-206ENST00000503565 PDZRN3Q9UPQ7 1066 aa8.58□□□□□ -1.04
SCLT1-206ENST00000503565 TNFRSF10AO00220 468 aa8.57□□□□□ -1.04
SCLT1-206ENST00000503565 GFRA3O60609 400 aa8.57□□□□□ -1.04
SCLT1-206ENST00000503565 PRR20EP86478 221 aa8.57□□□□□ -1.04
SCLT1-206ENST00000503565 PRR20CP86479 221 aa8.57□□□□□ -1.04
SCLT1-206ENST00000503565 PRR20DP86480 221 aa8.57□□□□□ -1.04
SCLT1-206ENST00000503565 PRR20BP86481 221 aa8.57□□□□□ -1.04
SCLT1-206ENST00000503565 PRR20AP86496 221 aa8.57□□□□□ -1.04
SCLT1-206ENST00000503565 BAP1Q92560 729 aa8.57□□□□□ -1.04
SCLT1-206ENST00000503565 POM121CA8CG34 1229 aa8.56□□□□□ -1.04
SCLT1-206ENST00000503565 SOCS7O14512 581 aa8.56□□□□□ -1.04
SCLT1-206ENST00000503565 AP1G2O75843 785 aa8.56□□□□□ -1.04
SCLT1-206ENST00000503565 SH3BP2P78314 561 aa8.56□□□□□ -1.04
SCLT1-206ENST00000503565 FOXC1Q12948 553 aa8.56□□□□□ -1.04
SCLT1-206ENST00000503565 RETREG2Q8NC44 543 aa8.56□□□□□ -1.04
SCLT1-206ENST00000503565 HELBQ8NG08 1087 aaPredicted RBP8.56□□□□□ -1.04
SCLT1-206ENST00000503565 EPS8L1Q8TE68 723 aa8.56□□□□□ -1.04
SCLT1-206ENST00000503565 HMX1Q9NP08 348 aaPredicted RBP8.56□□□□□ -1.04
SCLT1-206ENST00000503565 TBC1D2BQ9UPU7 963 aa8.56□□□□□ -1.04
SCLT1-206ENST00000503565 WNT7AO00755 349 aa8.55□□□□□ -1.04
SCLT1-206ENST00000503565 CTHP32929 405 aa8.55□□□□□ -1.04
SCLT1-206ENST00000503565 ABL2P42684 1182 aa8.55□□□□□ -1.04
SCLT1-206ENST00000503565 LINC01559Q495D7 138 aa8.55□□□□□ -1.04
SCLT1-206ENST00000503565 CCDC9Q9Y3X0 531 aaKnown RBP8.55□□□□□ -1.04
SCLT1-206ENST00000503565 RC3H1Q5TC82 1133 aaKnown RBP8.54□□□□□ -1.04
SCLT1-206ENST00000503565 TOR4AQ9NXH8 423 aa8.54□□□□□ -1.04
SCLT1-206ENST00000503565 NRG2O14511 850 aaPredicted RBP8.53□□□□□ -1.04
SCLT1-206ENST00000503565 USP17L8P0C7I0 530 aa8.53□□□□□ -1.04
SCLT1-206ENST00000503565 WNT7BP56706 349 aa8.53□□□□□ -1.04
SCLT1-206ENST00000503565 MRGPRX2Q96LB1 330 aa8.53□□□□□ -1.04
SCLT1-206ENST00000503565 NR6A1Q15406 480 aa8.52□□□□□ -1.05
SCLT1-206ENST00000503565 ZNF511Q8NB15 262 aa8.52□□□□□ -1.05
SCLT1-206ENST00000503565 GLMNQ92990 594 aa8.52□□□□□ -1.05
SCLT1-206ENST00000503565 SIAH2O43255 324 aa8.51□□□□□ -1.05
SCLT1-206ENST00000503565 IRF5Q13568 498 aa8.51□□□□□ -1.05
SCLT1-206ENST00000503565 C4orf48Q5BLP8 95 aa8.51□□□□□ -1.05
SCLT1-206ENST00000503565 KCTD17Q8N5Z5 321 aa8.51□□□□□ -1.05
SCLT1-206ENST00000503565 FOXJ1Q92949 421 aa8.51□□□□□ -1.05
SCLT1-206ENST00000503565 GJD4Q96KN9 370 aaPredicted RBP8.51□□□□□ -1.05
SCLT1-206ENST00000503565 CALR3Q96L12 384 aaKnown RBP8.51□□□□□ -1.05
SCLT1-206ENST00000503565 TRIM34Q9BYJ4 488 aa8.51□□□□□ -1.05
SCLT1-206ENST00000503565 AEBP1Q8IUX7 1158 aa8.49□□□□□ -1.05
SCLT1-206ENST00000503565 WWC1Q8IX03 1113 aa8.49□□□□□ -1.05
SCLT1-206ENST00000503565 GPR37L1O60883 481 aa8.48□□□□□ -1.05
SCLT1-206ENST00000503565 PPP1R15AO75807 674 aaPredicted RBP8.48□□□□□ -1.05
SCLT1-206ENST00000503565 LAPTM4AQ15012 233 aa8.48□□□□□ -1.05
SCLT1-206ENST00000503565 ADAMTS19Q8TE59 1207 aa8.48□□□□□ -1.05
SCLT1-206ENST00000503565 J3QL48 77 aa8.47□□□□□ -1.05
SCLT1-206ENST00000503565 SMPD1P17405 629 aa8.47□□□□□ -1.05
SCLT1-206ENST00000503565 SH3RF1Q7Z6J0 888 aa8.47□□□□□ -1.05
SCLT1-206ENST00000503565 OCSTAMPQ9BR26 566 aa8.47□□□□□ -1.05
SCLT1-206ENST00000503565 PRM3Q9NNZ6 103 aa8.47□□□□□ -1.05
SCLT1-206ENST00000503565 SH3BP5LQ7L8J4 393 aa8.46□□□□□ -1.06
SCLT1-206ENST00000503565 SNIP1Q8TAD8 396 aaKnown RBP8.46□□□□□ -1.06
SCLT1-206ENST00000503565 NDUFB9Q9Y6M9 179 aa8.46□□□□□ -1.06
SCLT1-206ENST00000503565 Q6ZNB5 142 aa8.45□□□□□ -1.06
SCLT1-206ENST00000503565 CYP4X1Q8N118 509 aa8.45□□□□□ -1.06
SCLT1-206ENST00000503565 EHBP1Q8NDI1 1231 aa8.45□□□□□ -1.06
SCLT1-206ENST00000503565 FKBPLQ9UIM3 349 aa8.45□□□□□ -1.06
SCLT1-206ENST00000503565 FAM187AA6NFU0 413 aa8.43□□□□□ -1.06
SCLT1-206ENST00000503565 DGAT1O75907 488 aa8.43□□□□□ -1.06
SCLT1-206ENST00000503565 VARSP26640 1264 aaKnown RBP8.43□□□□□ -1.06
SCLT1-206ENST00000503565 MYT1Q01538 1121 aa8.43□□□□□ -1.06
SCLT1-206ENST00000503565 HDGFL1Q5TGJ6 251 aa8.43□□□□□ -1.06
SCLT1-206ENST00000503565 ARMC2Q8NEN0 867 aa8.43□□□□□ -1.06
SCLT1-206ENST00000503565 C1QTNF2Q9BXJ5 285 aa8.43□□□□□ -1.06
SCLT1-206ENST00000503565 TLL2Q9Y6L7 1015 aa8.43□□□□□ -1.06
SCLT1-206ENST00000503565 TTC24A2A3L6 582 aaPredicted RBP8.42□□□□□ -1.06
SCLT1-206ENST00000503565 CFAP70Q5T0N1 1121 aa8.42□□□□□ -1.06
SCLT1-206ENST00000503565 AVPP01185 164 aa8.41□□□□□ -1.06
SCLT1-206ENST00000503565 SRPK2P78362 688 aaKnown RBP8.41□□□□□ -1.06
SCLT1-206ENST00000503565 PDXDC2PQ6P474 469 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms