RNA–Protein interactions for RNA: ENST00000503084.1

TNPO1-202, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 623 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-202ENST00000503084 KNDC1Q76NI1 1749 aa17.67■□□□□ 0.42
TNPO1-202ENST00000503084 GIGYF1O75420 1035 aaPredicted RBP17.66■□□□□ 0.42
TNPO1-202ENST00000503084 TRPM3Q9HCF6 1732 aaPredicted RBP17.65■□□□□ 0.42
TNPO1-202ENST00000503084 ANO8Q9HCE9 1232 aaPredicted RBP17.65■□□□□ 0.42
TNPO1-202ENST00000503084 STK26Q9P289 416 aa17.65■□□□□ 0.42
TNPO1-202ENST00000503084 SPATA31A1Q5TZJ5 1347 aa17.65■□□□□ 0.42
TNPO1-202ENST00000503084 CRYBG1Q9Y4K1 1723 aa17.64■□□□□ 0.41
TNPO1-202ENST00000503084 PTGER2P43116 358 aa17.63■□□□□ 0.41
TNPO1-202ENST00000503084 APLP2Q06481 763 aa17.63■□□□□ 0.41
TNPO1-202ENST00000503084 PDGFDQ9GZP0 370 aaPredicted RBP17.63■□□□□ 0.41
TNPO1-202ENST00000503084 ALS2Q96Q42 1657 aa17.63■□□□□ 0.41
TNPO1-202ENST00000503084 ZBTB7AO95365 584 aa17.62■□□□□ 0.41
TNPO1-202ENST00000503084 FHDC1Q9C0D6 1143 aaPredicted RBP17.61■□□□□ 0.41
TNPO1-202ENST00000503084 RGPD3A6NKT7 1758 aaPredicted RBP17.61■□□□□ 0.41
TNPO1-202ENST00000503084 RGPD4Q7Z3J3 1758 aa17.61■□□□□ 0.41
TNPO1-202ENST00000503084 DLC1Q96QB1 1528 aa17.6■□□□□ 0.41
TNPO1-202ENST00000503084 ABCC11Q96J66 1382 aa17.59■□□□□ 0.41
TNPO1-202ENST00000503084 SYT17Q9BSW7 474 aa17.59■□□□□ 0.41
TNPO1-202ENST00000503084 RPGRIP1LQ68CZ1 1315 aa17.58■□□□□ 0.4
TNPO1-202ENST00000503084 PRDM11Q9NQV5 511 aa17.58■□□□□ 0.4
TNPO1-202ENST00000503084 PDE3BQ13370 1112 aa17.57■□□□□ 0.4
TNPO1-202ENST00000503084 GOLGB1Q14789 3259 aaKnown RBP17.57■□□□□ 0.4
TNPO1-202ENST00000503084 SHANK3Q9BYB0 1731 aa17.57■□□□□ 0.4
TNPO1-202ENST00000503084 ATF5Q9Y2D1 282 aaPredicted RBP17.56■□□□□ 0.4
TNPO1-202ENST00000503084 STRN4Q9NRL3 753 aa17.55■□□□□ 0.4
TNPO1-202ENST00000503084 ADGRF5Q8IZF2 1346 aa17.54■□□□□ 0.4
TNPO1-202ENST00000503084 PMFBP1Q8TBY8 1022 aa17.54■□□□□ 0.4
TNPO1-202ENST00000503084 USP35Q9P2H5 1018 aa17.54■□□□□ 0.4
TNPO1-202ENST00000503084 KIAA0232Q92628 1395 aa17.53■□□□□ 0.4
TNPO1-202ENST00000503084 TMEM132EQ6IEE7 984 aa17.53■□□□□ 0.4
TNPO1-202ENST00000503084 YTHDC2Q9H6S0 1430 aaKnown RBP17.53■□□□□ 0.4
TNPO1-202ENST00000503084 CHRNA2Q15822 529 aa17.52■□□□□ 0.4
TNPO1-202ENST00000503084 BARGINQ6ZT62 677 aa17.52■□□□□ 0.4
TNPO1-202ENST00000503084 SSH2Q76I76 1423 aa17.52■□□□□ 0.4
TNPO1-202ENST00000503084 ANKARQ7Z5J8 1434 aa17.52■□□□□ 0.4
TNPO1-202ENST00000503084 PEAK1Q9H792 1746 aa17.52■□□□□ 0.39
TNPO1-202ENST00000503084 PHRF1Q9P1Y6 1649 aaKnown RBP17.5■□□□□ 0.39
TNPO1-202ENST00000503084 SGIP1Q9BQI5 828 aa17.49■□□□□ 0.39
TNPO1-202ENST00000503084 PARP4Q9UKK3 1724 aaKnown RBP17.49■□□□□ 0.39
TNPO1-202ENST00000503084 BCL11BQ9C0K0 894 aaPredicted RBP17.48■□□□□ 0.39
TNPO1-202ENST00000503084 GPRASP1Q5JY77 1395 aa17.48■□□□□ 0.39
TNPO1-202ENST00000503084 MAP3K5Q99683 1374 aa17.48■□□□□ 0.39
TNPO1-202ENST00000503084 ACIN1Q9UKV3 1341 aaKnown RBP17.47■□□□□ 0.39
TNPO1-202ENST00000503084 OVOS2A0A0G2JMS6 1433 aa17.47■□□□□ 0.39
TNPO1-202ENST00000503084 OVOS2A0A0J9YW53 1432 aa17.47■□□□□ 0.39
TNPO1-202ENST00000503084 OVOS2Q6IE36 1432 aa17.47■□□□□ 0.39
TNPO1-202ENST00000503084 SBF2Q86WG5 1849 aa17.47■□□□□ 0.39
TNPO1-202ENST00000503084 PLSCR1O15162 318 aa17.47■□□□□ 0.39
TNPO1-202ENST00000503084 PIK3C2GO75747 1445 aa17.47■□□□□ 0.39
TNPO1-202ENST00000503084 LOC105371045A0A1W2PR82 267 aa17.46■□□□□ 0.39
TNPO1-202ENST00000503084 ITGAEP38570 1179 aa17.45■□□□□ 0.38
TNPO1-202ENST00000503084 GPR162Q16538 588 aa17.45■□□□□ 0.38
TNPO1-202ENST00000503084 TCP11L2Q8N4U5 519 aa17.45■□□□□ 0.38
TNPO1-202ENST00000503084 MTFR1LQ9H019 292 aa17.45■□□□□ 0.38
TNPO1-202ENST00000503084 SAFB2Q14151 953 aaKnown RBP eCLIP17.44■□□□□ 0.38
TNPO1-202ENST00000503084 LARP1Q6PKG0 1096 aaKnown RBP17.44■□□□□ 0.38
TNPO1-202ENST00000503084 PTF1AQ7RTS3 328 aa17.44■□□□□ 0.38
TNPO1-202ENST00000503084 PROM2Q8N271 834 aa17.43■□□□□ 0.38
TNPO1-202ENST00000503084 LRRC37A3O60309 1634 aa17.43■□□□□ 0.38
TNPO1-202ENST00000503084 ZC3H6P61129 1189 aaKnown RBP17.42■□□□□ 0.38
TNPO1-202ENST00000503084 SIRT1Q96EB6 747 aa17.42■□□□□ 0.38
TNPO1-202ENST00000503084 ARXQ96QS3 562 aa17.42■□□□□ 0.38
TNPO1-202ENST00000503084 ATP7BP35670 1465 aa17.42■□□□□ 0.38
TNPO1-202ENST00000503084 LMO7Q8WWI1 1683 aa17.42■□□□□ 0.38
TNPO1-202ENST00000503084 C11orf95C9JLR9 678 aaPredicted RBP17.41■□□□□ 0.38
TNPO1-202ENST00000503084 HSPA6P17066 643 aa17.41■□□□□ 0.38
TNPO1-202ENST00000503084 STK32BQ9NY57 414 aa17.41■□□□□ 0.38
TNPO1-202ENST00000503084 PAK3O75914 559 aaPredicted RBP17.4■□□□□ 0.38
TNPO1-202ENST00000503084 EVA1CP58658 441 aa17.4■□□□□ 0.38
TNPO1-202ENST00000503084 PRAM1Q96QH2 718 aa17.4■□□□□ 0.38
TNPO1-202ENST00000503084 PRR36Q9H6K5 1346 aa17.4■□□□□ 0.38
TNPO1-202ENST00000503084 ANKRD30BQ9BXX2 1392 aa17.4■□□□□ 0.38
TNPO1-202ENST00000503084 SLC15A2Q16348 729 aa17.39■□□□□ 0.37
TNPO1-202ENST00000503084 DHX57Q6P158 1386 aaKnown RBP17.39■□□□□ 0.37
TNPO1-202ENST00000503084 TULP4Q9NRJ4 1543 aa17.38■□□□□ 0.37
TNPO1-202ENST00000503084 SPATA31E1Q6ZUB1 1445 aa17.38■□□□□ 0.37
TNPO1-202ENST00000503084 ATP10DQ9P241 1426 aa17.38■□□□□ 0.37
TNPO1-202ENST00000503084 PELP1Q8IZL8 1130 aaKnown RBP17.37■□□□□ 0.37
TNPO1-202ENST00000503084 THRAP3Q9Y2W1 955 aaKnown RBP17.37■□□□□ 0.37
TNPO1-202ENST00000503084 RGL3Q3MIN7 710 aa17.35■□□□□ 0.37
TNPO1-202ENST00000503084 COL5A2P05997 1499 aaPredicted RBP17.34■□□□□ 0.37
TNPO1-202ENST00000503084 TXNRD1Q16881 649 aa17.34■□□□□ 0.37
TNPO1-202ENST00000503084 NGDNQ8NEJ9 315 aaKnown RBP17.34■□□□□ 0.37
TNPO1-202ENST00000503084 PAPPAQ13219 1627 aa17.33■□□□□ 0.37
TNPO1-202ENST00000503084 EIF3AQ14152 1382 aaKnown RBP17.33■□□□□ 0.36
TNPO1-202ENST00000503084 NUTM2GQ5VZR2 741 aa17.33■□□□□ 0.36
TNPO1-202ENST00000503084 KLHL34Q8N239 644 aa17.33■□□□□ 0.36
TNPO1-202ENST00000503084 HIRIP3Q9BW71 556 aaPredicted RBP17.33■□□□□ 0.36
TNPO1-202ENST00000503084 CPDO75976 1380 aa17.31■□□□□ 0.36
TNPO1-202ENST00000503084 AATKQ6ZMQ8 1374 aa17.31■□□□□ 0.36
TNPO1-202ENST00000503084 CAPN15O75808 1086 aa17.31■□□□□ 0.36
TNPO1-202ENST00000503084 TOPAZ1Q8N9V7 1692 aa17.31■□□□□ 0.36
TNPO1-202ENST00000503084 WNK3Q9BYP7 1800 aa17.31■□□□□ 0.36
TNPO1-202ENST00000503084 CRB1P82279 1406 aa17.3■□□□□ 0.36
TNPO1-202ENST00000503084 POGKQ9P215 609 aa17.3■□□□□ 0.36
TNPO1-202ENST00000503084 AKAP12Q02952 1782 aa17.3■□□□□ 0.36
TNPO1-202ENST00000503084 BCL9O00512 1426 aa17.3■□□□□ 0.36
TNPO1-202ENST00000503084 DDB1Q16531 1140 aa17.29■□□□□ 0.36
TNPO1-202ENST00000503084 C14orf93Q9H972 538 aaKnown RBP17.29■□□□□ 0.36
TNPO1-202ENST00000503084 NLGN2Q8NFZ4 835 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms