RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 S1PR4O95977 384 aa12.06□□□□□ -0.48
NEDD4-203ENST00000502612 KCNH2Q12809 1159 aa12.06□□□□□ -0.48
NEDD4-203ENST00000502612 WASHC4Q2M389 1173 aa12.06□□□□□ -0.48
NEDD4-203ENST00000502612 HOMEZQ8IX15 550 aa12.06□□□□□ -0.48
NEDD4-203ENST00000502612 CCDC24Q8N4L8 307 aa12.06□□□□□ -0.48
NEDD4-203ENST00000502612 CCDC97Q96F63 343 aaPredicted RBP12.06□□□□□ -0.48
NEDD4-203ENST00000502612 EVA1BQ9NVM1 165 aa12.06□□□□□ -0.48
NEDD4-203ENST00000502612 HDGFL1Q5TGJ6 251 aa12.05□□□□□ -0.48
NEDD4-203ENST00000502612 PTCRAQ6ISU1 281 aaPredicted RBP12.05□□□□□ -0.48
NEDD4-203ENST00000502612 FBXO45P0C2W1 286 aa12.03□□□□□ -0.48
NEDD4-203ENST00000502612 SERPINA10Q9UK55 444 aa12.02□□□□□ -0.49
NEDD4-203ENST00000502612 PPEF1O14829 653 aaPredicted RBP12.01□□□□□ -0.49
NEDD4-203ENST00000502612 PNMA1Q8ND90 353 aa12.01□□□□□ -0.49
NEDD4-203ENST00000502612 ALG2Q9H553 416 aa12.01□□□□□ -0.49
NEDD4-203ENST00000502612 PCDH10Q9P2E7 1040 aa12.01□□□□□ -0.49
NEDD4-203ENST00000502612 HCSTQ9UBK5 93 aa12.01□□□□□ -0.49
NEDD4-203ENST00000502612 UNC93B1Q9H1C4 597 aa12□□□□□ -0.49
NEDD4-203ENST00000502612 FCF1Q9Y324 198 aaKnown RBP12□□□□□ -0.49
NEDD4-203ENST00000502612 NR1H3Q13133 447 aa11.99□□□□□ -0.49
NEDD4-203ENST00000502612 OCSTAMPQ9BR26 566 aa11.99□□□□□ -0.49
NEDD4-203ENST00000502612 ZBBXA8MT70 800 aa11.98□□□□□ -0.49
NEDD4-203ENST00000502612 ZC3H4Q9UPT8 1303 aaKnown RBP11.97□□□□□ -0.49
NEDD4-203ENST00000502612 ITGBL1O95965 494 aaPredicted RBP11.96□□□□□ -0.49
NEDD4-203ENST00000502612 KCNC4Q03721 635 aa11.96□□□□□ -0.49
NEDD4-203ENST00000502612 UCN2Q96RP3 112 aa11.96□□□□□ -0.49
NEDD4-203ENST00000502612 LINC01559Q495D7 138 aa11.95□□□□□ -0.5
NEDD4-203ENST00000502612 SEMA3FQ13275 785 aa11.93□□□□□ -0.5
NEDD4-203ENST00000502612 NBPF14Q5TI25 921 aa11.93□□□□□ -0.5
NEDD4-203ENST00000502612 PDXDC2PQ6P474 469 aa11.93□□□□□ -0.5
NEDD4-203ENST00000502612 ARMC2Q8NEN0 867 aa11.93□□□□□ -0.5
NEDD4-203ENST00000502612 EIF4G2P78344 907 aaKnown RBP eCLIP11.92□□□□□ -0.5
NEDD4-203ENST00000502612 PLA2G2CQ5R387 149 aa11.92□□□□□ -0.5
NEDD4-203ENST00000502612 BAP1Q92560 729 aa11.92□□□□□ -0.5
NEDD4-203ENST00000502612 RNF223E7ERA6 249 aa11.91□□□□□ -0.5
NEDD4-203ENST00000502612 SOX11P35716 441 aa11.91□□□□□ -0.5
NEDD4-203ENST00000502612 PTK2Q05397 1052 aa11.9□□□□□ -0.5
NEDD4-203ENST00000502612 CFAP70Q5T0N1 1121 aa11.9□□□□□ -0.5
NEDD4-203ENST00000502612 SH3BP5LQ7L8J4 393 aa11.9□□□□□ -0.5
NEDD4-203ENST00000502612 GPKOWQ92917 476 aaPredicted RBP eCLIP11.9□□□□□ -0.5
NEDD4-203ENST00000502612 FOXJ1Q92949 421 aa11.9□□□□□ -0.5
NEDD4-203ENST00000502612 PIK3CDO00329 1044 aa11.89□□□□□ -0.51
NEDD4-203ENST00000502612 RFX1P22670 979 aa11.89□□□□□ -0.51
NEDD4-203ENST00000502612 MMRN1Q13201 1228 aa11.89□□□□□ -0.51
NEDD4-203ENST00000502612 ADAM32Q8TC27 787 aa11.89□□□□□ -0.51
NEDD4-203ENST00000502612 ARHGAP9Q9BRR9 750 aa11.89□□□□□ -0.51
NEDD4-203ENST00000502612 CARD14Q9BXL6 1004 aa11.89□□□□□ -0.51
NEDD4-203ENST00000502612 PPP1R12CQ9BZL4 782 aa11.89□□□□□ -0.51
NEDD4-203ENST00000502612 PALM3A6NDB9 673 aaPredicted RBP11.88□□□□□ -0.51
NEDD4-203ENST00000502612 TBC1D9Q6ZT07 1266 aa11.88□□□□□ -0.51
NEDD4-203ENST00000502612 GPSM3Q9Y4H4 160 aa11.88□□□□□ -0.51
NEDD4-203ENST00000502612 PCDHB9Q9Y5E1 797 aa11.88□□□□□ -0.51
NEDD4-203ENST00000502612 MAGEB6P1A0A0J9YX57 407 aa11.87□□□□□ -0.51
NEDD4-203ENST00000502612 C4orf48Q5BLP8 95 aa11.87□□□□□ -0.51
NEDD4-203ENST00000502612 TFIP11Q9UBB9 837 aaKnown RBP11.87□□□□□ -0.51
NEDD4-203ENST00000502612 PPP1R18Q6NYC8 613 aa11.86□□□□□ -0.51
NEDD4-203ENST00000502612 ZNF511Q8NB15 262 aa11.86□□□□□ -0.51
NEDD4-203ENST00000502612 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.85□□□□□ -0.51
NEDD4-203ENST00000502612 SH3RF1Q7Z6J0 888 aa11.85□□□□□ -0.51
NEDD4-203ENST00000502612 SH3BP2P78314 561 aa11.84□□□□□ -0.51
NEDD4-203ENST00000502612 ZBTB33Q86T24 672 aa11.84□□□□□ -0.51
NEDD4-203ENST00000502612 ANKLE1Q8NAG6 615 aa11.84□□□□□ -0.51
NEDD4-203ENST00000502612 FAM174AQ8TBP5 190 aa11.84□□□□□ -0.51
NEDD4-203ENST00000502612 LMOD1P29536 600 aaPredicted RBP11.83□□□□□ -0.52
NEDD4-203ENST00000502612 AGERQ15109 404 aa11.83□□□□□ -0.52
NEDD4-203ENST00000502612 MAFBQ9Y5Q3 323 aaPredicted RBP11.82□□□□□ -0.52
NEDD4-203ENST00000502612 TRIM32Q13049 653 aa11.81□□□□□ -0.52
NEDD4-203ENST00000502612 ERFEQ4G0M1 354 aa11.81□□□□□ -0.52
NEDD4-203ENST00000502612 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.81□□□□□ -0.52
NEDD4-203ENST00000502612 CEP126Q9P2H0 1117 aa11.81□□□□□ -0.52
NEDD4-203ENST00000502612 SKOR1P84550 965 aa11.8□□□□□ -0.52
NEDD4-203ENST00000502612 CDCA8Q53HL2 280 aa11.8□□□□□ -0.52
NEDD4-203ENST00000502612 BPHLQ86WA6 291 aaPredicted RBP11.8□□□□□ -0.52
NEDD4-203ENST00000502612 ATP9BO43861 1147 aa11.79□□□□□ -0.52
NEDD4-203ENST00000502612 GGCXP38435 758 aa11.79□□□□□ -0.52
NEDD4-203ENST00000502612 SRPK2P78362 688 aaKnown RBP11.79□□□□□ -0.52
NEDD4-203ENST00000502612 EMID1Q96A84 441 aaPredicted RBP11.79□□□□□ -0.52
NEDD4-203ENST00000502612 ZBTB24O43167 697 aaPredicted RBP11.78□□□□□ -0.52
NEDD4-203ENST00000502612 SKIP12755 728 aa11.78□□□□□ -0.52
NEDD4-203ENST00000502612 DZIP3Q86Y13 1208 aaKnown RBP11.78□□□□□ -0.52
NEDD4-203ENST00000502612 RETREG2Q8NC44 543 aa11.78□□□□□ -0.52
NEDD4-203ENST00000502612 PBXIP1Q96AQ6 731 aa11.78□□□□□ -0.52
NEDD4-203ENST00000502612 DEPDC4Q8N2C3 294 aa11.77□□□□□ -0.53
NEDD4-203ENST00000502612 TSGA10IPQ3SY00 556 aa11.76□□□□□ -0.53
NEDD4-203ENST00000502612 LIAT1Q6ZQX7 453 aa11.76□□□□□ -0.53
NEDD4-203ENST00000502612 PHTF2Q8N3S3 785 aa11.76□□□□□ -0.53
NEDD4-203ENST00000502612 C1QTNF2Q9BXJ5 285 aa11.76□□□□□ -0.53
NEDD4-203ENST00000502612 USP17L5A8MUK1 530 aa11.75□□□□□ -0.53
NEDD4-203ENST00000502612 SLFNL1Q499Z3 407 aa11.75□□□□□ -0.53
NEDD4-203ENST00000502612 RNF135Q8IUD6 432 aa11.75□□□□□ -0.53
NEDD4-203ENST00000502612 USP17L3A6NCW0 530 aa11.74□□□□□ -0.53
NEDD4-203ENST00000502612 USP17L4A6NCW7 530 aa11.74□□□□□ -0.53
NEDD4-203ENST00000502612 GIGYF1O75420 1035 aaPredicted RBP11.74□□□□□ -0.53
NEDD4-203ENST00000502612 PPP1R15AO75807 674 aaPredicted RBP11.74□□□□□ -0.53
NEDD4-203ENST00000502612 USP17L2Q6R6M4 530 aa11.74□□□□□ -0.53
NEDD4-203ENST00000502612 USP17L1Q7RTZ2 530 aa11.74□□□□□ -0.53
NEDD4-203ENST00000502612 NFATC2IPQ8NCF5 419 aa11.73□□□□□ -0.53
NEDD4-203ENST00000502612 SLC10A4Q96EP9 437 aa11.73□□□□□ -0.53
NEDD4-203ENST00000502612 MCCD1P59942 119 aaPredicted RBP11.72□□□□□ -0.53
NEDD4-203ENST00000502612 PLPP7Q8NBV4 271 aa11.72□□□□□ -0.53
NEDD4-203ENST00000502612 CCDC85AQ96PX6 553 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms