RNA–Protein interactions for RNA: ENST00000502066.6

CRNDE-202, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-202ENST00000502066 RGS12O14924 1447 aa12.34□□□□□ -0.43
CRNDE-202ENST00000502066 MAGI2Q86UL8 1455 aa12.34□□□□□ -0.43
CRNDE-202ENST00000502066 GGCXP38435 758 aa12.33□□□□□ -0.44
CRNDE-202ENST00000502066 FAM161AQ3B820 660 aa12.33□□□□□ -0.44
CRNDE-202ENST00000502066 BLOC1S3Q6QNY0 202 aa12.33□□□□□ -0.44
CRNDE-202ENST00000502066 ZNF784Q8NCA9 323 aaPredicted RBP12.33□□□□□ -0.44
CRNDE-202ENST00000502066 NECTIN2Q92692 538 aa12.33□□□□□ -0.44
CRNDE-202ENST00000502066 PCDHB3Q9Y5E6 796 aa12.33□□□□□ -0.44
CRNDE-202ENST00000502066 ATP10AO60312 1499 aa12.33□□□□□ -0.44
CRNDE-202ENST00000502066 ATAD2Q6PL18 1390 aa12.32□□□□□ -0.44
CRNDE-202ENST00000502066 VWDEQ8N2E2 1590 aa12.32□□□□□ -0.44
CRNDE-202ENST00000502066 C9orf84Q5VXU9 1444 aa12.32□□□□□ -0.44
CRNDE-202ENST00000502066 HECW1Q76N89 1606 aa12.32□□□□□ -0.44
CRNDE-202ENST00000502066 SLC4A3P48751 1232 aa12.31□□□□□ -0.44
CRNDE-202ENST00000502066 TLL1O43897 1013 aa12.3□□□□□ -0.44
CRNDE-202ENST00000502066 KCNV2Q8TDN2 545 aa12.29□□□□□ -0.44
CRNDE-202ENST00000502066 LRP6O75581 1613 aa12.29□□□□□ -0.44
CRNDE-202ENST00000502066 FAM135BQ49AJ0 1406 aa12.28□□□□□ -0.44
CRNDE-202ENST00000502066 PTGDRQ13258 359 aa12.28□□□□□ -0.44
CRNDE-202ENST00000502066 ARHGEF1Q92888 912 aaKnown RBP12.28□□□□□ -0.44
CRNDE-202ENST00000502066 RNF223E7ERA6 249 aa12.27□□□□□ -0.45
CRNDE-202ENST00000502066 PPEF1O14829 653 aaPredicted RBP12.27□□□□□ -0.45
CRNDE-202ENST00000502066 EMID1Q96A84 441 aaPredicted RBP12.27□□□□□ -0.45
CRNDE-202ENST00000502066 TMUB1Q9BVT8 246 aa12.27□□□□□ -0.45
CRNDE-202ENST00000502066 NHSL1Q5SYE7 1610 aa12.26□□□□□ -0.45
CRNDE-202ENST00000502066 ZNF142P52746 1687 aaPredicted RBP12.26□□□□□ -0.45
CRNDE-202ENST00000502066 NUTM2FA1L443 756 aa12.26□□□□□ -0.45
CRNDE-202ENST00000502066 ARID3CA6NKF2 412 aa12.26□□□□□ -0.45
CRNDE-202ENST00000502066 DNAJB2P25686 324 aa12.26□□□□□ -0.45
CRNDE-202ENST00000502066 ZNF787Q6DD87 383 aa12.26□□□□□ -0.45
CRNDE-202ENST00000502066 JCADQ9P266 1359 aa12.26□□□□□ -0.45
CRNDE-202ENST00000502066 IQGAP2Q13576 1575 aa12.26□□□□□ -0.45
CRNDE-202ENST00000502066 ADGRG1Q9Y653 693 aa12.25□□□□□ -0.45
CRNDE-202ENST00000502066 STRCP1A6NGW2 1772 aa12.25□□□□□ -0.45
CRNDE-202ENST00000502066 HRCP23327 699 aa12.24□□□□□ -0.45
CRNDE-202ENST00000502066 SLC19A1P41440 591 aa12.24□□□□□ -0.45
CRNDE-202ENST00000502066 NPATQ14207 1427 aa12.24□□□□□ -0.45
CRNDE-202ENST00000502066 RBM46Q8TBY0 533 aaKnown RBP12.24□□□□□ -0.45
CRNDE-202ENST00000502066 PRR14Q9BWN1 585 aa12.24□□□□□ -0.45
CRNDE-202ENST00000502066 TMEM134Q9H6X4 195 aa12.24□□□□□ -0.45
CRNDE-202ENST00000502066 CEP170BQ9Y4F5 1589 aaPredicted RBP12.24□□□□□ -0.45
CRNDE-202ENST00000502066 POLR1AO95602 1720 aaPredicted RBP12.23□□□□□ -0.45
CRNDE-202ENST00000502066 MYO3AQ8NEV4 1616 aa12.23□□□□□ -0.45
CRNDE-202ENST00000502066 NEURL4Q96JN8 1562 aa12.23□□□□□ -0.45
CRNDE-202ENST00000502066 RCCD1A6NED2 376 aa12.23□□□□□ -0.45
CRNDE-202ENST00000502066 TRIM67Q6ZTA4 783 aa12.23□□□□□ -0.45
CRNDE-202ENST00000502066 ABCA8O94911 1581 aa12.22□□□□□ -0.45
CRNDE-202ENST00000502066 S1PR4O95977 384 aa12.21□□□□□ -0.45
CRNDE-202ENST00000502066 CCDC125Q86Z20 511 aa12.21□□□□□ -0.45
CRNDE-202ENST00000502066 ROBO1Q9Y6N7 1651 aa12.21□□□□□ -0.45
CRNDE-202ENST00000502066 CFHP08603 1231 aa12.2□□□□□ -0.46
CRNDE-202ENST00000502066 RBM6P78332 1123 aaKnown RBP12.2□□□□□ -0.46
CRNDE-202ENST00000502066 CDK13Q14004 1512 aaKnown RBP12.19□□□□□ -0.46
CRNDE-202ENST00000502066 ACTN4O43707 911 aaKnown RBP12.18□□□□□ -0.46
CRNDE-202ENST00000502066 SLC10A3P09131 477 aa12.18□□□□□ -0.46
CRNDE-202ENST00000502066 SYNMO15061 1565 aa12.18□□□□□ -0.46
CRNDE-202ENST00000502066 PHLPP1O60346 1717 aa12.17□□□□□ -0.46
CRNDE-202ENST00000502066 AFF2P51816 1311 aa12.17□□□□□ -0.46
CRNDE-202ENST00000502066 PRELPP51888 382 aa12.17□□□□□ -0.46
CRNDE-202ENST00000502066 KMT5BQ4FZB7 885 aa12.17□□□□□ -0.46
CRNDE-202ENST00000502066 SPRYD7Q5W111 196 aa12.17□□□□□ -0.46
CRNDE-202ENST00000502066 LIAT1Q6ZQX7 453 aa12.17□□□□□ -0.46
CRNDE-202ENST00000502066 SPATA31A6Q5VVP1 1343 aa12.16□□□□□ -0.46
CRNDE-202ENST00000502066 QTRT2Q9H974 415 aaKnown RBP12.16□□□□□ -0.46
CRNDE-202ENST00000502066 EP400Q96L91 3159 aa12.15□□□□□ -0.46
CRNDE-202ENST00000502066 CFAP74Q9C0B2 1584 aa12.15□□□□□ -0.46
CRNDE-202ENST00000502066 CNTLNQ9NXG0 1405 aa12.14□□□□□ -0.47
CRNDE-202ENST00000502066 SEMA3EO15041 775 aa12.14□□□□□ -0.47
CRNDE-202ENST00000502066 ANKLE1Q8NAG6 615 aa12.14□□□□□ -0.47
CRNDE-202ENST00000502066 PKDCCQ504Y2 493 aa12.13□□□□□ -0.47
CRNDE-202ENST00000502066 DEFB132Q7Z7B7 95 aa12.13□□□□□ -0.47
CRNDE-202ENST00000502066 ZNF598Q86UK7 904 aaKnown RBP12.13□□□□□ -0.47
CRNDE-202ENST00000502066 ZNF775Q96BV0 537 aaPredicted RBP12.13□□□□□ -0.47
CRNDE-202ENST00000502066 XIRP1Q702N8 1843 aaKnown RBP12.12□□□□□ -0.47
CRNDE-202ENST00000502066 TNFRSF10AO00220 468 aa12.12□□□□□ -0.47
CRNDE-202ENST00000502066 PUS10Q3MIT2 529 aaKnown RBP12.12□□□□□ -0.47
CRNDE-202ENST00000502066 ZMYM3Q14202 1370 aa12.12□□□□□ -0.47
CRNDE-202ENST00000502066 DNMT1P26358 1616 aaKnown RBP12.11□□□□□ -0.47
CRNDE-202ENST00000502066 FCHSD2O94868 740 aa12.11□□□□□ -0.47
CRNDE-202ENST00000502066 MYT1Q01538 1121 aa12.11□□□□□ -0.47
CRNDE-202ENST00000502066 ZNF697Q5TEC3 545 aa12.11□□□□□ -0.47
CRNDE-202ENST00000502066 BIVM-ERCC5R4GMW8 1640 aa12.11□□□□□ -0.47
CRNDE-202ENST00000502066 ATP10BO94823 1461 aa12.1□□□□□ -0.47
CRNDE-202ENST00000502066 BCL9LQ86UU0 1499 aa12.1□□□□□ -0.47
CRNDE-202ENST00000502066 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.1□□□□□ -0.47
CRNDE-202ENST00000502066 POTECB2RU33 542 aa12.1□□□□□ -0.47
CRNDE-202ENST00000502066 PLA2G2CQ5R387 149 aa12.1□□□□□ -0.47
CRNDE-202ENST00000502066 AGLP35573 1532 aa12.1□□□□□ -0.47
CRNDE-202ENST00000502066 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.1□□□□□ -0.47
CRNDE-202ENST00000502066 SCAPERQ9BY12 1400 aa12.1□□□□□ -0.47
CRNDE-202ENST00000502066 ADH1BP00325 375 aa12.09□□□□□ -0.47
CRNDE-202ENST00000502066 UGGT2Q9NYU1 1516 aa12.09□□□□□ -0.47
CRNDE-202ENST00000502066 IGF1RP08069 1367 aa12.08□□□□□ -0.48
CRNDE-202ENST00000502066 MROH2AA6NES4 1674 aa12.08□□□□□ -0.48
CRNDE-202ENST00000502066 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.08□□□□□ -0.48
CRNDE-202ENST00000502066 NR1I2O75469 434 aa12.08□□□□□ -0.48
CRNDE-202ENST00000502066 ANKLE2Q86XL3 938 aa12.08□□□□□ -0.48
CRNDE-202ENST00000502066 SCUBE3Q8IX30 993 aa12.08□□□□□ -0.48
CRNDE-202ENST00000502066 PXYLP1Q8TE99 480 aa12.08□□□□□ -0.48
CRNDE-202ENST00000502066 NGLY1Q96IV0 654 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms