RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 ARMC9Q7Z3E5 817 aa5.68□□□□□ -1.5
NEAT1-202ENST00000501122 FYB1O15117 783 aa5.68□□□□□ -1.5
NEAT1-202ENST00000501122 KRBA2Q6ZNG9 492 aa5.68□□□□□ -1.5
NEAT1-202ENST00000501122 KIF5BP33176 963 aa5.67□□□□□ -1.5
NEAT1-202ENST00000501122 ZKSCAN8Q15776 578 aaPredicted RBP5.67□□□□□ -1.5
NEAT1-202ENST00000501122 RBM33Q96EV2 1170 aaKnown RBP5.67□□□□□ -1.5
NEAT1-202ENST00000501122 MAP2K1Q02750 393 aaPredicted RBP5.67□□□□□ -1.5
NEAT1-202ENST00000501122 EBAG9O00559 213 aa5.67□□□□□ -1.5
NEAT1-202ENST00000501122 ZFYP08048 801 aaPredicted RBP5.67□□□□□ -1.5
NEAT1-202ENST00000501122 RLBP1P12271 317 aa5.67□□□□□ -1.5
NEAT1-202ENST00000501122 MYCNP04198 464 aaPredicted RBP5.67□□□□□ -1.5
NEAT1-202ENST00000501122 HSPA4P34932 840 aa5.67□□□□□ -1.5
NEAT1-202ENST00000501122 DNAJC21Q5F1R6 531 aaKnown RBP5.67□□□□□ -1.5
NEAT1-202ENST00000501122 JRKLQ9Y4A0 524 aa5.67□□□□□ -1.5
NEAT1-202ENST00000501122 SKAP1Q86WV1 359 aa5.67□□□□□ -1.5
NEAT1-202ENST00000501122 SMC2O95347 1197 aa5.67□□□□□ -1.5
NEAT1-202ENST00000501122 PDE3BQ13370 1112 aa5.67□□□□□ -1.5
NEAT1-202ENST00000501122 ODF2Q5BJF6 829 aa5.67□□□□□ -1.5
NEAT1-202ENST00000501122 MRFAP1Q9Y605 127 aa5.67□□□□□ -1.5
NEAT1-202ENST00000501122 PTPN14Q15678 1187 aa5.66□□□□□ -1.5
NEAT1-202ENST00000501122 SF3A1Q15459 793 aaKnown RBP5.66□□□□□ -1.5
NEAT1-202ENST00000501122 CRACR2AQ9BSW2 395 aa5.66□□□□□ -1.5
NEAT1-202ENST00000501122 GEMIN8Q9NWZ8 242 aaKnown RBP5.66□□□□□ -1.5
NEAT1-202ENST00000501122 VEZTQ9HBM0 779 aa5.66□□□□□ -1.5
NEAT1-202ENST00000501122 IPO8O15397 1037 aaKnown RBP5.66□□□□□ -1.5
NEAT1-202ENST00000501122 SCLT1Q96NL6 688 aa5.66□□□□□ -1.5
NEAT1-202ENST00000501122 GOLGA2Q08379 1002 aa5.66□□□□□ -1.5
NEAT1-202ENST00000501122 KANK4Q5T7N3 995 aaPredicted RBP5.66□□□□□ -1.5
NEAT1-202ENST00000501122 ICE2Q659A1 982 aa5.66□□□□□ -1.5
NEAT1-202ENST00000501122 CAPN2P17655 700 aa5.66□□□□□ -1.5
NEAT1-202ENST00000501122 NUTM1Q86Y26 1132 aa5.66□□□□□ -1.5
NEAT1-202ENST00000501122 ERCC3P19447 782 aa5.65□□□□□ -1.5
NEAT1-202ENST00000501122 KCNA4P22459 653 aa5.65□□□□□ -1.5
NEAT1-202ENST00000501122 AKAP17AQ02040 695 aaKnown RBP5.65□□□□□ -1.5
NEAT1-202ENST00000501122 TMEM132AQ24JP5 1023 aa5.65□□□□□ -1.5
NEAT1-202ENST00000501122 FAM184AQ8NB25 1140 aa5.65□□□□□ -1.5
NEAT1-202ENST00000501122 ANAPC4Q9UJX5 808 aa5.65□□□□□ -1.5
NEAT1-202ENST00000501122 CASQ1P31415 396 aa5.65□□□□□ -1.5
NEAT1-202ENST00000501122 JAKMIP3Q5VZ66 844 aa5.65□□□□□ -1.5
NEAT1-202ENST00000501122 KLHL10Q6JEL2 608 aa5.65□□□□□ -1.5
NEAT1-202ENST00000501122 RGS22Q8NE09 1264 aa5.65□□□□□ -1.5
NEAT1-202ENST00000501122 SATB2Q9UPW6 733 aa5.65□□□□□ -1.5
NEAT1-202ENST00000501122 WHAMMP3Q1A5X7 153 aa5.65□□□□□ -1.5
NEAT1-202ENST00000501122 C22orf23Q9BZE7 217 aa5.65□□□□□ -1.5
NEAT1-202ENST00000501122 LRRC23Q53EV4 343 aaPredicted RBP5.65□□□□□ -1.5
NEAT1-202ENST00000501122 NBPF8Q3BBV2 869 aa5.65□□□□□ -1.5
NEAT1-202ENST00000501122 MAP7D1Q3KQU3 841 aa5.65□□□□□ -1.51
NEAT1-202ENST00000501122 EXOC6Q8TAG9 804 aa5.65□□□□□ -1.51
NEAT1-202ENST00000501122 CCDC114Q96M63 670 aa5.65□□□□□ -1.51
NEAT1-202ENST00000501122 CEP63Q96MT8 703 aa5.65□□□□□ -1.51
NEAT1-202ENST00000501122 CFAP45Q9UL16 551 aa5.65□□□□□ -1.51
NEAT1-202ENST00000501122 TRIM29Q14134 588 aa5.65□□□□□ -1.51
NEAT1-202ENST00000501122 MCM6Q14566 821 aa5.65□□□□□ -1.51
NEAT1-202ENST00000501122 NBPF3Q9H094 633 aa5.65□□□□□ -1.51
NEAT1-202ENST00000501122 PFDN1O60925 122 aa5.65□□□□□ -1.51
NEAT1-202ENST00000501122 TRDNQ13061 729 aa5.64□□□□□ -1.51
NEAT1-202ENST00000501122 CCDC181Q5TID7 509 aa5.64□□□□□ -1.51
NEAT1-202ENST00000501122 ZBTB9Q96C00 473 aa5.64□□□□□ -1.51
NEAT1-202ENST00000501122 WHAMMQ8TF30 809 aa5.64□□□□□ -1.51
NEAT1-202ENST00000501122 MAP9Q49MG5 647 aa5.64□□□□□ -1.51
NEAT1-202ENST00000501122 CALR3Q96L12 384 aaKnown RBP5.64□□□□□ -1.51
NEAT1-202ENST00000501122 ZNF830Q96NB3 372 aaPredicted RBP5.64□□□□□ -1.51
NEAT1-202ENST00000501122 FAM210AQ96ND0 272 aa5.64□□□□□ -1.51
NEAT1-202ENST00000501122 ZBTB17Q13105 803 aa5.64□□□□□ -1.51
NEAT1-202ENST00000501122 FBXW7Q969H0 707 aa5.64□□□□□ -1.51
NEAT1-202ENST00000501122 BAZ1BQ9UIG0 1483 aaKnown RBP5.64□□□□□ -1.51
NEAT1-202ENST00000501122 USP6NLQ92738 828 aa5.64□□□□□ -1.51
NEAT1-202ENST00000501122 CEP128Q6ZU80 1094 aa5.64□□□□□ -1.51
NEAT1-202ENST00000501122 B4GALNT4Q76KP1 1039 aa5.64□□□□□ -1.51
NEAT1-202ENST00000501122 NCAPGQ9BPX3 1015 aa5.64□□□□□ -1.51
NEAT1-202ENST00000501122 CEP89Q96ST8 783 aa5.64□□□□□ -1.51
NEAT1-202ENST00000501122 FRMD4BQ9Y2L6 1034 aa5.64□□□□□ -1.51
NEAT1-202ENST00000501122 HOOK1Q9UJC3 728 aaKnown RBP5.64□□□□□ -1.51
NEAT1-202ENST00000501122 PDCD7Q8N8D1 485 aaKnown RBP5.64□□□□□ -1.51
NEAT1-202ENST00000501122 MCM3P25205 808 aa5.64□□□□□ -1.51
NEAT1-202ENST00000501122 PSMD2Q13200 908 aa5.64□□□□□ -1.51
NEAT1-202ENST00000501122 NOLC1Q14978 699 aaKnown RBP eCLIP5.64□□□□□ -1.512e-27■■□□□ 12.4
NEAT1-202ENST00000501122 CCDC65Q8IXS2 484 aa5.64□□□□□ -1.51
NEAT1-202ENST00000501122 CFAP57Q96MR6 1250 aa5.64□□□□□ -1.51
NEAT1-202ENST00000501122 WWC2Q6AWC2 1192 aa5.63□□□□□ -1.51
NEAT1-202ENST00000501122 RAD21O60216 631 aa5.63□□□□□ -1.51
NEAT1-202ENST00000501122 PLIN1O60240 522 aa5.63□□□□□ -1.51
NEAT1-202ENST00000501122 RTF1Q92541 710 aaKnown RBP5.63□□□□□ -1.51
NEAT1-202ENST00000501122 ARFGAP3Q9NP61 516 aa5.63□□□□□ -1.51
NEAT1-202ENST00000501122 PDILTQ8N807 584 aa5.63□□□□□ -1.51
NEAT1-202ENST00000501122 SUFUQ9UMX1 484 aa5.63□□□□□ -1.51
NEAT1-202ENST00000501122 ERC1Q8IUD2 1116 aa5.63□□□□□ -1.51
NEAT1-202ENST00000501122 CCDC192P0DO97 292 aa5.63□□□□□ -1.51
NEAT1-202ENST00000501122 SESN3P58005 492 aa5.63□□□□□ -1.51
NEAT1-202ENST00000501122 POTEB2H3BUK9 544 aa5.63□□□□□ -1.51
NEAT1-202ENST00000501122 ERLIN2O94905 339 aa5.63□□□□□ -1.51
NEAT1-202ENST00000501122 NUCB1Q02818 461 aa5.63□□□□□ -1.51
NEAT1-202ENST00000501122 CIZ1Q9ULV3 898 aaPredicted RBP5.63□□□□□ -1.51
NEAT1-202ENST00000501122 SMARCC1Q92922 1105 aaPredicted RBP5.63□□□□□ -1.51
NEAT1-202ENST00000501122 MKRN1Q9UHC7 482 aaKnown RBP5.63□□□□□ -1.51
NEAT1-202ENST00000501122 CCDC121Q6ZUS5 278 aa5.63□□□□□ -1.51
NEAT1-202ENST00000501122 MFSD4BQ5TF39 518 aa5.63□□□□□ -1.51
NEAT1-202ENST00000501122 VIMP08670 466 aaKnown RBP5.62□□□□□ -1.51
NEAT1-202ENST00000501122 ZNF365Q70YC5 407 aa5.62□□□□□ -1.51
NEAT1-202ENST00000501122 MYRIPQ8NFW9 859 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms