RNA–Protein interactions for RNA: ENST00000498569.5

NF1-217, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-217ENST00000498569 CLIP1P30622 1438 aa8.57□□□□□ -1.04
NF1-217ENST00000498569 CLTCQ00610 1675 aaKnown RBP8.57□□□□□ -1.04
NF1-217ENST00000498569 ZNF787Q6DD87 383 aa8.57□□□□□ -1.04
NF1-217ENST00000498569 ATP1B4Q9UN42 357 aaPredicted RBP8.57□□□□□ -1.04
NF1-217ENST00000498569 AGLP35573 1532 aa8.57□□□□□ -1.04
NF1-217ENST00000498569 NCOA1Q15788 1441 aa8.56□□□□□ -1.04
NF1-217ENST00000498569 FMN1Q68DA7 1419 aa8.56□□□□□ -1.04
NF1-217ENST00000498569 ABCC1P33527 1531 aa8.56□□□□□ -1.04
NF1-217ENST00000498569 OSBPP22059 807 aa8.56□□□□□ -1.04
NF1-217ENST00000498569 COPS2P61201 443 aa8.56□□□□□ -1.04
NF1-217ENST00000498569 SPRYD3Q8NCJ5 442 aa8.56□□□□□ -1.04
NF1-217ENST00000498569 CDK11AQ9UQ88 783 aaPredicted RBP8.56□□□□□ -1.04
NF1-217ENST00000498569 POLR1AO95602 1720 aaPredicted RBP8.56□□□□□ -1.04
NF1-217ENST00000498569 TRAPPC8Q9Y2L5 1435 aa8.55□□□□□ -1.04
NF1-217ENST00000498569 SWT1Q5T5J6 900 aaKnown RBP8.55□□□□□ -1.04
NF1-217ENST00000498569 TTC13Q8NBP0 860 aa8.55□□□□□ -1.04
NF1-217ENST00000498569 NKX2-3Q8TAU0 364 aa8.55□□□□□ -1.04
NF1-217ENST00000498569 CNTLNQ9NXG0 1405 aa8.54□□□□□ -1.04
NF1-217ENST00000498569 MLH3Q9UHC1 1453 aa8.54□□□□□ -1.04
NF1-217ENST00000498569 PADI6Q6TGC4 694 aa8.54□□□□□ -1.04
NF1-217ENST00000498569 AFAP1Q8N556 730 aa8.54□□□□□ -1.04
NF1-217ENST00000498569 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.54□□□□□ -1.04
NF1-217ENST00000498569 TROQ12816 1431 aaPredicted RBP8.54□□□□□ -1.04
NF1-217ENST00000498569 ZPR1O75312 459 aa8.53□□□□□ -1.04
NF1-217ENST00000498569 CEP170BQ9Y4F5 1589 aaPredicted RBP8.52□□□□□ -1.04
NF1-217ENST00000498569 UBAP1LF5GYI3 381 aa8.51□□□□□ -1.05
NF1-217ENST00000498569 PCDHB3Q9Y5E6 796 aa8.51□□□□□ -1.05
NF1-217ENST00000498569 NPATQ14207 1427 aa8.51□□□□□ -1.05
NF1-217ENST00000498569 MED1Q15648 1581 aaPredicted RBP8.51□□□□□ -1.05
NF1-217ENST00000498569 ADGBQ8N7X0 1667 aa8.5□□□□□ -1.05
NF1-217ENST00000498569 SAMD9LQ8IVG5 1584 aa8.5□□□□□ -1.05
NF1-217ENST00000498569 CCDC18Q5T9S5 1454 aa8.5□□□□□ -1.05
NF1-217ENST00000498569 ARHGAP35Q9NRY4 1499 aa8.5□□□□□ -1.05
NF1-217ENST00000498569 SLC19A1P41440 591 aa8.49□□□□□ -1.05
NF1-217ENST00000498569 ZNF335Q9H4Z2 1342 aaPredicted RBP8.49□□□□□ -1.05
NF1-217ENST00000498569 SYCP2Q9BX26 1530 aa8.49□□□□□ -1.05
NF1-217ENST00000498569 INO80Q9ULG1 1556 aaPredicted RBP8.48□□□□□ -1.05
NF1-217ENST00000498569 PKDCCQ504Y2 493 aa8.48□□□□□ -1.05
NF1-217ENST00000498569 NPDC1Q9NQX5 325 aaPredicted RBP8.48□□□□□ -1.05
NF1-217ENST00000498569 PLA2R1Q13018 1463 aa8.48□□□□□ -1.05
NF1-217ENST00000498569 ATP7AQ04656 1500 aa8.48□□□□□ -1.05
NF1-217ENST00000498569 PLXNC1O60486 1568 aa8.48□□□□□ -1.05
NF1-217ENST00000498569 UBTFP17480 764 aaKnown RBP8.47□□□□□ -1.05
NF1-217ENST00000498569 EYA1Q99502 592 aa8.47□□□□□ -1.05
NF1-217ENST00000498569 TCOF1Q13428 1488 aaKnown RBP8.46□□□□□ -1.05
NF1-217ENST00000498569 RNF223E7ERA6 249 aa8.46□□□□□ -1.06
NF1-217ENST00000498569 DGAT1O75907 488 aa8.46□□□□□ -1.06
NF1-217ENST00000498569 ZNF775Q96BV0 537 aaPredicted RBP8.46□□□□□ -1.06
NF1-217ENST00000498569 DNMT1P26358 1616 aaKnown RBP8.46□□□□□ -1.06
NF1-217ENST00000498569 ZMYM3Q14202 1370 aa8.46□□□□□ -1.06
NF1-217ENST00000498569 DNAJB2P25686 324 aa8.45□□□□□ -1.06
NF1-217ENST00000498569 PRR20EP86478 221 aa8.45□□□□□ -1.06
NF1-217ENST00000498569 PRR20CP86479 221 aa8.45□□□□□ -1.06
NF1-217ENST00000498569 PRR20DP86480 221 aa8.45□□□□□ -1.06
NF1-217ENST00000498569 PRR20BP86481 221 aa8.45□□□□□ -1.06
NF1-217ENST00000498569 PRR20AP86496 221 aa8.45□□□□□ -1.06
NF1-217ENST00000498569 KMT5BQ4FZB7 885 aa8.45□□□□□ -1.06
NF1-217ENST00000498569 BLOC1S3Q6QNY0 202 aa8.45□□□□□ -1.06
NF1-217ENST00000498569 ANKLE1Q8NAG6 615 aa8.45□□□□□ -1.06
NF1-217ENST00000498569 CPS1P31327 1500 aa8.44□□□□□ -1.06
NF1-217ENST00000498569 SPRYD7Q5W111 196 aa8.44□□□□□ -1.06
NF1-217ENST00000498569 TRIM67Q6ZTA4 783 aa8.44□□□□□ -1.06
NF1-217ENST00000498569 ZNF598Q86UK7 904 aaKnown RBP8.44□□□□□ -1.06
NF1-217ENST00000498569 PIP4K2BP78356 416 aa8.43□□□□□ -1.06
NF1-217ENST00000498569 RBM46Q8TBY0 533 aaKnown RBP8.43□□□□□ -1.06
NF1-217ENST00000498569 ZNF777Q9ULD5 760 aaPredicted RBP8.43□□□□□ -1.06
NF1-217ENST00000498569 SPAG9O60271 1321 aaKnown RBP8.43□□□□□ -1.06
NF1-217ENST00000498569 PTPRKQ15262 1439 aa8.43□□□□□ -1.06
NF1-217ENST00000498569 CASKIN1Q8WXD9 1431 aa8.43□□□□□ -1.06
NF1-217ENST00000498569 A2MP01023 1474 aa8.43□□□□□ -1.06
NF1-217ENST00000498569 NEURL4Q96JN8 1562 aa8.43□□□□□ -1.06
NF1-217ENST00000498569 HSPA1LP34931 641 aa8.42□□□□□ -1.06
NF1-217ENST00000498569 A2ML1A8K2U0 1454 aa8.42□□□□□ -1.06
NF1-217ENST00000498569 PLEKHH2Q8IVE3 1493 aa8.42□□□□□ -1.06
NF1-217ENST00000498569 FYCO1Q9BQS8 1478 aa8.42□□□□□ -1.06
NF1-217ENST00000498569 IQGAP1P46940 1657 aa8.41□□□□□ -1.06
NF1-217ENST00000498569 ACTN4O43707 911 aaKnown RBP8.41□□□□□ -1.06
NF1-217ENST00000498569 TLL1O43897 1013 aa8.41□□□□□ -1.06
NF1-217ENST00000498569 MYT1Q01538 1121 aa8.41□□□□□ -1.06
NF1-217ENST00000498569 ZNF697Q5TEC3 545 aa8.41□□□□□ -1.06
NF1-217ENST00000498569 RNF17Q9BXT8 1623 aaKnown RBP8.4□□□□□ -1.06
NF1-217ENST00000498569 SYNMO15061 1565 aa8.4□□□□□ -1.06
NF1-217ENST00000498569 SHANK2Q9UPX8 1470 aa8.4□□□□□ -1.06
NF1-217ENST00000498569 TOM1O60784 492 aa8.4□□□□□ -1.06
NF1-217ENST00000498569 GGT6Q6P531 493 aa8.4□□□□□ -1.06
NF1-217ENST00000498569 CFAP44Q96MT7 982 aa8.4□□□□□ -1.06
NF1-217ENST00000498569 TMEM134Q9H6X4 195 aa8.4□□□□□ -1.06
NF1-217ENST00000498569 GPATCH8Q9UKJ3 1502 aaKnown RBP8.39□□□□□ -1.07
NF1-217ENST00000498569 CFAP65Q6ZU64 1925 aaKnown RBP8.39□□□□□ -1.07
NF1-217ENST00000498569 FAM187AA6NFU0 413 aa8.39□□□□□ -1.07
NF1-217ENST00000498569 S1PR4O95977 384 aa8.39□□□□□ -1.07
NF1-217ENST00000498569 ADH1BP00325 375 aa8.39□□□□□ -1.07
NF1-217ENST00000498569 PAXIP1Q6ZW49 1069 aaPredicted RBP8.39□□□□□ -1.07
NF1-217ENST00000498569 EMID1Q96A84 441 aaPredicted RBP8.39□□□□□ -1.07
NF1-217ENST00000498569 STRCP1A6NGW2 1772 aa8.39□□□□□ -1.07
NF1-217ENST00000498569 DEPDC5O75140 1603 aa8.39□□□□□ -1.07
NF1-217ENST00000498569 VWDEQ8N2E2 1590 aa8.39□□□□□ -1.07
NF1-217ENST00000498569 KDM5DQ9BY66 1539 aa8.39□□□□□ -1.07
NF1-217ENST00000498569 NR1I2O75469 434 aa8.38□□□□□ -1.07
NF1-217ENST00000498569 CFHP08603 1231 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms