RNA–Protein interactions for RNA: ENST00000498449.5

SYNPR-215, Transcript of synaptoporin, humanhuman

TSL 2

Gene SYNPR, Length 1,296 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPR-215ENST00000498449 BRD4O60885 1362 aaPredicted RBP18.74■□□□□ 0.59
SYNPR-215ENST00000498449 RALBP1Q15311 655 aa18.74■□□□□ 0.59
SYNPR-215ENST00000498449 USP54Q70EL1 1684 aa18.73■□□□□ 0.59
SYNPR-215ENST00000498449 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.73■□□□□ 0.59
SYNPR-215ENST00000498449 NHSL1Q5SYE7 1610 aa18.73■□□□□ 0.59
SYNPR-215ENST00000498449 FYB1O15117 783 aa18.72■□□□□ 0.59
SYNPR-215ENST00000498449 BRINP3Q76B58 766 aa18.72■□□□□ 0.59
SYNPR-215ENST00000498449 TTC21AQ8NDW8 1320 aa18.72■□□□□ 0.59
SYNPR-215ENST00000498449 MARF1Q9Y4F3 1742 aaKnown RBP18.71■□□□□ 0.59
SYNPR-215ENST00000498449 ROBO1Q9Y6N7 1651 aa18.71■□□□□ 0.59
SYNPR-215ENST00000498449 FOXO3O43524 673 aa18.71■□□□□ 0.59
SYNPR-215ENST00000498449 PSME1Q06323 249 aa18.7■□□□□ 0.58
SYNPR-215ENST00000498449 NME9Q86XW9 330 aa18.7■□□□□ 0.58
SYNPR-215ENST00000498449 GGNBP2Q9H3C7 697 aa18.7■□□□□ 0.58
SYNPR-215ENST00000498449 PXDNQ92626 1479 aa18.69■□□□□ 0.58
SYNPR-215ENST00000498449 ALS2Q96Q42 1657 aa18.69■□□□□ 0.58
SYNPR-215ENST00000498449 MORC1Q86VD1 984 aa18.68■□□□□ 0.58
SYNPR-215ENST00000498449 NPHP3Q7Z494 1330 aa18.68■□□□□ 0.58
SYNPR-215ENST00000498449 MYBBP1AQ9BQG0 1328 aaKnown RBP18.68■□□□□ 0.58
SYNPR-215ENST00000498449 OVOS2A0A0J9YW53 1432 aa18.67■□□□□ 0.58
SYNPR-215ENST00000498449 OVOS2Q6IE36 1432 aa18.67■□□□□ 0.58
SYNPR-215ENST00000498449 CCER2I3L3R5 266 aa18.67■□□□□ 0.58
SYNPR-215ENST00000498449 KRT28Q7Z3Y7 464 aa18.67■□□□□ 0.58
SYNPR-215ENST00000498449 USP31Q70CQ4 1352 aa18.67■□□□□ 0.58
SYNPR-215ENST00000498449 XPCQ01831 940 aaPredicted RBP18.66■□□□□ 0.58
SYNPR-215ENST00000498449 ZRANB1Q9UGI0 708 aa18.66■□□□□ 0.58
SYNPR-215ENST00000498449 MAP2P11137 1827 aaKnown RBP18.65■□□□□ 0.58
SYNPR-215ENST00000498449 CERKQ8TCT0 537 aa18.65■□□□□ 0.58
SYNPR-215ENST00000498449 DDX17Q92841 729 aaKnown RBP18.65■□□□□ 0.58
SYNPR-215ENST00000498449 AHDC1Q5TGY3 1603 aaPredicted RBP18.64■□□□□ 0.57
SYNPR-215ENST00000498449 PAK3O75914 559 aaPredicted RBP18.64■□□□□ 0.57
SYNPR-215ENST00000498449 PPP2R1AP30153 589 aa18.64■□□□□ 0.57
SYNPR-215ENST00000498449 COG3Q96JB2 828 aa18.64■□□□□ 0.57
SYNPR-215ENST00000498449 SBNO1A3KN83 1393 aa18.64■□□□□ 0.57
SYNPR-215ENST00000498449 TOM1O60784 492 aa18.62■□□□□ 0.57
SYNPR-215ENST00000498449 NLRP13Q86W25 1043 aa18.62■□□□□ 0.57
SYNPR-215ENST00000498449 SCAF1Q9H7N4 1312 aaKnown RBP18.62■□□□□ 0.57
SYNPR-215ENST00000498449 TNS3Q68CZ2 1445 aa18.62■□□□□ 0.57
SYNPR-215ENST00000498449 SOS2Q07890 1332 aaPredicted RBP18.61■□□□□ 0.57
SYNPR-215ENST00000498449 TNNT2P45379 298 aaPredicted RBP18.61■□□□□ 0.57
SYNPR-215ENST00000498449 ABTB2Q8N961 1025 aa18.61■□□□□ 0.57
SYNPR-215ENST00000498449 CCDC184Q52MB2 194 aa18.6■□□□□ 0.57
SYNPR-215ENST00000498449 CRYBG1Q9Y4K1 1723 aa18.6■□□□□ 0.57
SYNPR-215ENST00000498449 UBAP1LF5GYI3 381 aa18.59■□□□□ 0.57
SYNPR-215ENST00000498449 NLRP6P59044 892 aa18.59■□□□□ 0.57
SYNPR-215ENST00000498449 PHLPP1O60346 1717 aa18.59■□□□□ 0.57
SYNPR-215ENST00000498449 SLIT3O75094 1523 aa18.59■□□□□ 0.57
SYNPR-215ENST00000498449 AATKQ6ZMQ8 1374 aa18.58■□□□□ 0.57
SYNPR-215ENST00000498449 SPATA31A3Q5VYP0 1347 aa18.58■□□□□ 0.57
SYNPR-215ENST00000498449 NUTM2GQ5VZR2 741 aa18.58■□□□□ 0.56
SYNPR-215ENST00000498449 MRS2Q9HD23 443 aa18.58■□□□□ 0.56
SYNPR-215ENST00000498449 PHRF1Q9P1Y6 1649 aaKnown RBP18.58■□□□□ 0.56
SYNPR-215ENST00000498449 MED1Q15648 1581 aaPredicted RBP18.58■□□□□ 0.56
SYNPR-215ENST00000498449 SMG6Q86US8 1419 aaKnown RBP18.57■□□□□ 0.56
SYNPR-215ENST00000498449 LTN1O94822 1766 aa18.56■□□□□ 0.56
SYNPR-215ENST00000498449 NFAT5O94916 1531 aa18.56■□□□□ 0.56
SYNPR-215ENST00000498449 COL16A1Q07092 1604 aaPredicted RBP18.56■□□□□ 0.56
SYNPR-215ENST00000498449 ARHGEF10O15013 1369 aa18.55■□□□□ 0.56
SYNPR-215ENST00000498449 USP19O94966 1318 aa18.55■□□□□ 0.56
SYNPR-215ENST00000498449 PIP4K2BP78356 416 aa18.55■□□□□ 0.56
SYNPR-215ENST00000498449 LMOD2Q6P5Q4 547 aa18.55■□□□□ 0.56
SYNPR-215ENST00000498449 ABCA3Q99758 1704 aa18.54■□□□□ 0.56
SYNPR-215ENST00000498449 PEAK1Q9H792 1746 aa18.54■□□□□ 0.56
SYNPR-215ENST00000498449 FBLN1P23142 703 aa18.53■□□□□ 0.56
SYNPR-215ENST00000498449 MTHFSP49914 203 aa18.53■□□□□ 0.56
SYNPR-215ENST00000498449 SHPRHQ149N8 1683 aa18.53■□□□□ 0.56
SYNPR-215ENST00000498449 POLKQ9UBT6 870 aa18.52■□□□□ 0.56
SYNPR-215ENST00000498449 COL3A1P02461 1466 aaPredicted RBP18.52■□□□□ 0.55
SYNPR-215ENST00000498449 CDK12Q9NYV4 1490 aaPredicted RBP18.52■□□□□ 0.55
SYNPR-215ENST00000498449 SOX12O15370 315 aa18.51■□□□□ 0.55
SYNPR-215ENST00000498449 COL22A1Q8NFW1 1626 aaPredicted RBP18.5■□□□□ 0.55
SYNPR-215ENST00000498449 RRS1Q15050 365 aaKnown RBP18.5■□□□□ 0.55
SYNPR-215ENST00000498449 EMILIN1Q9Y6C2 1016 aa18.5■□□□□ 0.55
SYNPR-215ENST00000498449 KCNH5Q8NCM2 988 aa18.49■□□□□ 0.55
SYNPR-215ENST00000498449 INSRP06213 1382 aa18.48■□□□□ 0.55
SYNPR-215ENST00000498449 PNPLA6Q8IY17 1366 aa18.48■□□□□ 0.55
SYNPR-215ENST00000498449 CFAP53Q96M91 514 aa18.48■□□□□ 0.55
SYNPR-215ENST00000498449 MAP3K19Q56UN5 1328 aa18.48■□□□□ 0.55
SYNPR-215ENST00000498449 PLEKHG5O94827 1062 aa18.47■□□□□ 0.55
SYNPR-215ENST00000498449 GCP02774 474 aa18.47■□□□□ 0.55
SYNPR-215ENST00000498449 PNISRQ8TF01 805 aaKnown RBP18.47■□□□□ 0.55
SYNPR-215ENST00000498449 LRRC59Q96AG4 307 aaKnown RBP18.47■□□□□ 0.55
SYNPR-215ENST00000498449 KIF24Q5T7B8 1368 aa18.45■□□□□ 0.54
SYNPR-215ENST00000498449 PPM1GO15355 546 aaPredicted RBP18.45■□□□□ 0.54
SYNPR-215ENST00000498449 RTL1A6NKG5 1358 aa18.44■□□□□ 0.54
SYNPR-215ENST00000498449 FLT4P35916 1363 aa18.44■□□□□ 0.54
SYNPR-215ENST00000498449 CABLES1Q8TDN4 633 aa18.44■□□□□ 0.54
SYNPR-215ENST00000498449 RGPD5Q99666 1765 aa18.44■□□□□ 0.54
SYNPR-215ENST00000498449 COL18A1P39060 1754 aa18.43■□□□□ 0.54
SYNPR-215ENST00000498449 FAM9BQ8IZU0 186 aa18.43■□□□□ 0.54
SYNPR-215ENST00000498449 AMPHP49418 695 aa18.42■□□□□ 0.54
SYNPR-215ENST00000498449 ARHGEF25Q86VW2 580 aa18.42■□□□□ 0.54
SYNPR-215ENST00000498449 ABCC6O95255 1503 aa18.41■□□□□ 0.54
SYNPR-215ENST00000498449 CPDO75976 1380 aa18.41■□□□□ 0.54
SYNPR-215ENST00000498449 RGPD1P0DJD0 1748 aa18.4■□□□□ 0.54
SYNPR-215ENST00000498449 DIAPH1O60610 1272 aaKnown RBP18.4■□□□□ 0.54
SYNPR-215ENST00000498449 HOXC9P31274 260 aa18.4■□□□□ 0.54
SYNPR-215ENST00000498449 WDR43Q15061 677 aaKnown RBP eCLIP18.4■□□□□ 0.54
SYNPR-215ENST00000498449 ZC3H6P61129 1189 aaKnown RBP18.39■□□□□ 0.53
SYNPR-215ENST00000498449 HSP90AB2PQ58FF8 381 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms