RNA–Protein interactions for RNA: ENST00000498443.5

TSPAN1-209, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 1,071 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-209ENST00000498443 LMOD2Q6P5Q4 547 aa14.14□□□□□ -0.15
TSPAN1-209ENST00000498443 CABLES1Q8TDN4 633 aa14.14□□□□□ -0.15
TSPAN1-209ENST00000498443 CDK19Q9BWU1 502 aa14.14□□□□□ -0.15
TSPAN1-209ENST00000498443 WASLO00401 505 aaPredicted RBP14.13□□□□□ -0.15
TSPAN1-209ENST00000498443 YY1P25490 414 aa14.13□□□□□ -0.15
TSPAN1-209ENST00000498443 CABP2Q9NPB3 220 aa14.13□□□□□ -0.15
TSPAN1-209ENST00000498443 USP32Q8NFA0 1604 aa14.12□□□□□ -0.15
TSPAN1-209ENST00000498443 FAM182BQ5T319 152 aa14.12□□□□□ -0.15
TSPAN1-209ENST00000498443 CENPJQ9HC77 1338 aaPredicted RBP14.12□□□□□ -0.15
TSPAN1-209ENST00000498443 VPS72Q15906 364 aa14.11□□□□□ -0.15
TSPAN1-209ENST00000498443 PLCH1Q4KWH8 1693 aa14.1□□□□□ -0.15
TSPAN1-209ENST00000498443 GPRASP1Q5JY77 1395 aa14.1□□□□□ -0.15
TSPAN1-209ENST00000498443 FMN2Q9NZ56 1722 aa14.1□□□□□ -0.15
TSPAN1-209ENST00000498443 CDC42BPGQ6DT37 1551 aa14.1□□□□□ -0.15
TSPAN1-209ENST00000498443 FAM98CQ17RN3 349 aaKnown RBP14.1□□□□□ -0.15
TSPAN1-209ENST00000498443 GTF3C3Q9Y5Q9 886 aa14.1□□□□□ -0.15
TSPAN1-209ENST00000498443 SPATA31A3Q5VYP0 1347 aa14.1□□□□□ -0.15
TSPAN1-209ENST00000498443 ST20-MTHFSA0A0A6YYL1 179 aa14.09□□□□□ -0.15
TSPAN1-209ENST00000498443 KRT28Q7Z3Y7 464 aa14.09□□□□□ -0.15
TSPAN1-209ENST00000498443 NUDT16Q96DE0 195 aaKnown RBP14.09□□□□□ -0.15
TSPAN1-209ENST00000498443 PHF8Q9UPP1 1060 aa14.08□□□□□ -0.16
TSPAN1-209ENST00000498443 TULP4Q9NRJ4 1543 aa14.06□□□□□ -0.16
TSPAN1-209ENST00000498443 SRPK2P78362 688 aaKnown RBP14.06□□□□□ -0.16
TSPAN1-209ENST00000498443 EZH2Q15910 746 aaKnown RBP14.06□□□□□ -0.16
TSPAN1-209ENST00000498443 QRICH2Q9H0J4 1663 aa14.06□□□□□ -0.16
TSPAN1-209ENST00000498443 RGPD1P0DJD0 1748 aa14.05□□□□□ -0.16
TSPAN1-209ENST00000498443 YTHDC1Q96MU7 727 aaKnown RBP14.05□□□□□ -0.16
TSPAN1-209ENST00000498443 TESK2Q96S53 571 aa14.05□□□□□ -0.16
TSPAN1-209ENST00000498443 ADGRB2O60241 1585 aa14.05□□□□□ -0.16
TSPAN1-209ENST00000498443 TNS3Q68CZ2 1445 aa14.04□□□□□ -0.16
TSPAN1-209ENST00000498443 KIF1AQ12756 1690 aa14.04□□□□□ -0.16
TSPAN1-209ENST00000498443 NWD2Q9ULI1 1742 aa14.04□□□□□ -0.16
TSPAN1-209ENST00000498443 ONECUT3O60422 494 aaPredicted RBP14.03□□□□□ -0.16
TSPAN1-209ENST00000498443 BTG4Q9NY30 223 aa14.03□□□□□ -0.16
TSPAN1-209ENST00000498443 CABP1Q9NZU7 370 aa14.03□□□□□ -0.16
TSPAN1-209ENST00000498443 ATP7BP35670 1465 aa14.03□□□□□ -0.16
TSPAN1-209ENST00000498443 USP47Q96K76 1375 aa14.02□□□□□ -0.17
TSPAN1-209ENST00000498443 FAM83GA6ND36 823 aa14.02□□□□□ -0.17
TSPAN1-209ENST00000498443 PSME1Q06323 249 aa14.02□□□□□ -0.17
TSPAN1-209ENST00000498443 PPP1R1BQ9UD71 204 aaPredicted RBP14.02□□□□□ -0.17
TSPAN1-209ENST00000498443 ABCA3Q99758 1704 aa14.01□□□□□ -0.17
TSPAN1-209ENST00000498443 NUTM2GQ5VZR2 741 aa14.01□□□□□ -0.17
TSPAN1-209ENST00000498443 ACEP12821 1306 aa14□□□□□ -0.17
TSPAN1-209ENST00000498443 DCAF8L1A6NGE4 600 aa14□□□□□ -0.17
TSPAN1-209ENST00000498443 TRIM37O94972 964 aa14□□□□□ -0.17
TSPAN1-209ENST00000498443 HSPA5P11021 654 aaKnown RBP14□□□□□ -0.17
TSPAN1-209ENST00000498443 NGDNQ8NEJ9 315 aaKnown RBP14□□□□□ -0.17
TSPAN1-209ENST00000498443 ANKARQ7Z5J8 1434 aa13.99□□□□□ -0.17
TSPAN1-209ENST00000498443 TNS1Q9HBL0 1735 aaKnown RBP13.99□□□□□ -0.17
TSPAN1-209ENST00000498443 C11orf95C9JLR9 678 aaPredicted RBP13.99□□□□□ -0.17
TSPAN1-209ENST00000498443 SLC12A5Q9H2X9 1139 aa13.99□□□□□ -0.17
TSPAN1-209ENST00000498443 CCDC61Q9Y6R9 512 aa13.99□□□□□ -0.17
TSPAN1-209ENST00000498443 NRAPQ86VF7 1730 aa13.98□□□□□ -0.17
TSPAN1-209ENST00000498443 EVC2Q86UK5 1308 aa13.98□□□□□ -0.17
TSPAN1-209ENST00000498443 APBA3O96018 575 aa13.98□□□□□ -0.17
TSPAN1-209ENST00000498443 PPIP5K1Q6PFW1 1433 aa13.98□□□□□ -0.17
TSPAN1-209ENST00000498443 PLEKHG3A1L390 1219 aa13.97□□□□□ -0.17
TSPAN1-209ENST00000498443 PAK3O75914 559 aaPredicted RBP13.97□□□□□ -0.17
TSPAN1-209ENST00000498443 EIF3AQ14152 1382 aaKnown RBP13.96□□□□□ -0.17
TSPAN1-209ENST00000498443 CCER2I3L3R5 266 aa13.96□□□□□ -0.17
TSPAN1-209ENST00000498443 TMC1Q8TDI8 760 aa13.96□□□□□ -0.17
TSPAN1-209ENST00000498443 ARHGEF10O15013 1369 aa13.96□□□□□ -0.18
TSPAN1-209ENST00000498443 TOPAZ1Q8N9V7 1692 aa13.95□□□□□ -0.18
TSPAN1-209ENST00000498443 CAMKK2Q96RR4 588 aa13.94□□□□□ -0.18
TSPAN1-209ENST00000498443 POLR3GLQ9BT43 218 aa13.94□□□□□ -0.18
TSPAN1-209ENST00000498443 USP35Q9P2H5 1018 aa13.94□□□□□ -0.18
TSPAN1-209ENST00000498443 SBNO1A3KN83 1393 aa13.94□□□□□ -0.18
TSPAN1-209ENST00000498443 SPATA31A5Q5VU36 1347 aa13.93□□□□□ -0.18
TSPAN1-209ENST00000498443 SPATA31A7Q8IWB4 1347 aa13.93□□□□□ -0.18
TSPAN1-209ENST00000498443 ANP32CO43423 234 aa13.93□□□□□ -0.18
TSPAN1-209ENST00000498443 NBPF14Q5TI25 921 aa13.93□□□□□ -0.18
TSPAN1-209ENST00000498443 STRN4Q9NRL3 753 aa13.93□□□□□ -0.18
TSPAN1-209ENST00000498443 COL14A1Q05707 1796 aaKnown RBP13.93□□□□□ -0.18
TSPAN1-209ENST00000498443 CAMTA1Q9Y6Y1 1673 aa13.92□□□□□ -0.18
TSPAN1-209ENST00000498443 DISP2A7MBM2 1401 aa13.92□□□□□ -0.18
TSPAN1-209ENST00000498443 SENP3-EIF4A1A0A087X0R7 540 aa13.92□□□□□ -0.18
TSPAN1-209ENST00000498443 POLR3AO14802 1390 aaPredicted RBP13.92□□□□□ -0.18
TSPAN1-209ENST00000498443 TRPM3Q9HCF6 1732 aaPredicted RBP13.92□□□□□ -0.18
TSPAN1-209ENST00000498443 FAM196AQ6ZSG2 479 aa13.91□□□□□ -0.18
TSPAN1-209ENST00000498443 SPON1Q9HCB6 807 aa13.91□□□□□ -0.18
TSPAN1-209ENST00000498443 PRDM11Q9NQV5 511 aa13.91□□□□□ -0.18
TSPAN1-209ENST00000498443 SBNO2Q9Y2G9 1366 aa13.91□□□□□ -0.18
TSPAN1-209ENST00000498443 CD163L1Q9NR16 1453 aa13.91□□□□□ -0.18
TSPAN1-209ENST00000498443 THSD7AQ9UPZ6 1657 aa13.91□□□□□ -0.18
TSPAN1-209ENST00000498443 EIF4G2P78344 907 aaKnown RBP eCLIP13.9□□□□□ -0.18
TSPAN1-209ENST00000498443 DDX10Q13206 875 aaKnown RBP13.9□□□□□ -0.18
TSPAN1-209ENST00000498443 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.9□□□□□ -0.18
TSPAN1-209ENST00000498443 CHRNA2Q15822 529 aa13.89□□□□□ -0.19
TSPAN1-209ENST00000498443 NUP188Q5SRE5 1749 aa13.89□□□□□ -0.19
TSPAN1-209ENST00000498443 KCNQ2O43526 872 aa13.88□□□□□ -0.19
TSPAN1-209ENST00000498443 FBLN1P23142 703 aa13.88□□□□□ -0.19
TSPAN1-209ENST00000498443 PDE3BQ13370 1112 aa13.88□□□□□ -0.19
TSPAN1-209ENST00000498443 ABTB2Q8N961 1025 aa13.88□□□□□ -0.19
TSPAN1-209ENST00000498443 ITSN1Q15811 1721 aa13.87□□□□□ -0.19
TSPAN1-209ENST00000498443 SOX12O15370 315 aa13.87□□□□□ -0.19
TSPAN1-209ENST00000498443 ZC3H6P61129 1189 aaKnown RBP13.87□□□□□ -0.19
TSPAN1-209ENST00000498443 TMF1P82094 1093 aa13.87□□□□□ -0.19
TSPAN1-209ENST00000498443 NME9Q86XW9 330 aa13.87□□□□□ -0.19
TSPAN1-209ENST00000498443 RREB1Q92766 1687 aa13.87□□□□□ -0.19
TSPAN1-209ENST00000498443 USP6P35125 1406 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms