RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 WASLO00401 505 aaPredicted RBP23.7■■□□□ 1.38
MUC1-220ENST00000498431 FAM182BQ5T319 152 aa23.69■■□□□ 1.38
MUC1-220ENST00000498431 LRP5O75197 1615 aa23.69■■□□□ 1.38
MUC1-220ENST00000498431 EIF3AQ14152 1382 aaKnown RBP23.68■■□□□ 1.38
MUC1-220ENST00000498431 DCAF11Q8TEB1 546 aa23.68■■□□□ 1.38
MUC1-220ENST00000498431 PSDA5PKW4 1024 aaPredicted RBP23.67■■□□□ 1.38
MUC1-220ENST00000498431 SPATA31A5Q5VU36 1347 aa23.66■■□□□ 1.38
MUC1-220ENST00000498431 SPATA31A7Q8IWB4 1347 aa23.66■■□□□ 1.38
MUC1-220ENST00000498431 BAG6P46379 1132 aa23.66■■□□□ 1.38
MUC1-220ENST00000498431 NGDNQ8NEJ9 315 aaKnown RBP23.66■■□□□ 1.38
MUC1-220ENST00000498431 THSD7AQ9UPZ6 1657 aa23.66■■□□□ 1.38
MUC1-220ENST00000498431 ARHGEF28Q8N1W1 1705 aaKnown RBP23.65■■□□□ 1.38
MUC1-220ENST00000498431 PAK3O75914 559 aaPredicted RBP23.65■■□□□ 1.38
MUC1-220ENST00000498431 ATP7BP35670 1465 aa23.64■■□□□ 1.38
MUC1-220ENST00000498431 RGPD1P0DJD0 1748 aa23.64■■□□□ 1.37
MUC1-220ENST00000498431 EN1Q05925 392 aaPredicted RBP23.63■■□□□ 1.37
MUC1-220ENST00000498431 PRDM11Q9NQV5 511 aa23.63■■□□□ 1.37
MUC1-220ENST00000498431 ITSN1Q15811 1721 aa23.62■■□□□ 1.37
MUC1-220ENST00000498431 TNS1Q9HBL0 1735 aaKnown RBP23.62■■□□□ 1.37
MUC1-220ENST00000498431 HRCP23327 699 aa23.61■■□□□ 1.37
MUC1-220ENST00000498431 PHRF1Q9P1Y6 1649 aaKnown RBP23.61■■□□□ 1.37
MUC1-220ENST00000498431 KIAA0232Q92628 1395 aa23.6■■□□□ 1.37
MUC1-220ENST00000498431 CHRNA2Q15822 529 aa23.59■■□□□ 1.37
MUC1-220ENST00000498431 NUDT16Q96DE0 195 aaKnown RBP23.59■■□□□ 1.37
MUC1-220ENST00000498431 SPATA31A1Q5TZJ5 1347 aa23.58■■□□□ 1.36
MUC1-220ENST00000498431 NUTM2GQ5VZR2 741 aa23.57■■□□□ 1.36
MUC1-220ENST00000498431 DISP2A7MBM2 1401 aa23.56■■□□□ 1.36
MUC1-220ENST00000498431 TOPAZ1Q8N9V7 1692 aa23.55■■□□□ 1.36
MUC1-220ENST00000498431 STRN4Q9NRL3 753 aa23.55■■□□□ 1.36
MUC1-220ENST00000498431 ZC3H6P61129 1189 aaKnown RBP23.54■■□□□ 1.36
MUC1-220ENST00000498431 R3HDM1Q15032 1099 aaKnown RBP23.54■■□□□ 1.36
MUC1-220ENST00000498431 STAC3Q96MF2 364 aa23.54■■□□□ 1.36
MUC1-220ENST00000498431 CDK19Q9BWU1 502 aa23.54■■□□□ 1.36
MUC1-220ENST00000498431 EZH2Q15910 746 aaKnown RBP23.53■■□□□ 1.36
MUC1-220ENST00000498431 POLR3AO14802 1390 aaPredicted RBP23.52■■□□□ 1.36
MUC1-220ENST00000498431 ACEP12821 1306 aa23.51■■□□□ 1.35
MUC1-220ENST00000498431 NRKQ7Z2Y5 1582 aa23.5■■□□□ 1.35
MUC1-220ENST00000498431 TRIM37O94972 964 aa23.5■■□□□ 1.35
MUC1-220ENST00000498431 USP35Q9P2H5 1018 aa23.5■■□□□ 1.35
MUC1-220ENST00000498431 NBPF8Q3BBV2 869 aa23.49■■□□□ 1.35
MUC1-220ENST00000498431 CAMKK2Q96RR4 588 aa23.48■■□□□ 1.35
MUC1-220ENST00000498431 SSH2Q76I76 1423 aa23.48■■□□□ 1.35
MUC1-220ENST00000498431 CAMTA1Q9Y6Y1 1673 aa23.48■■□□□ 1.35
MUC1-220ENST00000498431 FAM196AQ6ZSG2 479 aa23.47■■□□□ 1.35
MUC1-220ENST00000498431 LMO7Q8WWI1 1683 aa23.46■■□□□ 1.35
MUC1-220ENST00000498431 CCDC61Q9Y6R9 512 aa23.46■■□□□ 1.35
MUC1-220ENST00000498431 PLEKHG3A1L390 1219 aa23.45■■□□□ 1.34
MUC1-220ENST00000498431 LARP1Q6PKG0 1096 aaKnown RBP23.45■■□□□ 1.34
MUC1-220ENST00000498431 KIAA1210Q9ULL0 1709 aa23.45■■□□□ 1.34
MUC1-220ENST00000498431 APBA3O96018 575 aa23.43■■□□□ 1.34
MUC1-220ENST00000498431 EVA1CP58658 441 aa23.43■■□□□ 1.34
MUC1-220ENST00000498431 NBPF1Q3BBV0 1214 aa23.43■■□□□ 1.34
MUC1-220ENST00000498431 BARGINQ6ZT62 677 aa23.43■■□□□ 1.34
MUC1-220ENST00000498431 ABTB2Q8N961 1025 aa23.43■■□□□ 1.34
MUC1-220ENST00000498431 RREB1Q92766 1687 aa23.42■■□□□ 1.34
MUC1-220ENST00000498431 USP19O94966 1318 aa23.42■■□□□ 1.34
MUC1-220ENST00000498431 CPDO75976 1380 aa23.41■■□□□ 1.34
MUC1-220ENST00000498431 NUP188Q5SRE5 1749 aa23.4■■□□□ 1.34
MUC1-220ENST00000498431 PDE3BQ13370 1112 aa23.4■■□□□ 1.34
MUC1-220ENST00000498431 TCP11L2Q8N4U5 519 aa23.39■■□□□ 1.33
MUC1-220ENST00000498431 PARD3Q8TEW0 1356 aa23.39■■□□□ 1.33
MUC1-220ENST00000498431 PPIP5K1Q6PFW1 1433 aa23.38■■□□□ 1.33
MUC1-220ENST00000498431 GCP02774 474 aa23.36■■□□□ 1.33
MUC1-220ENST00000498431 SRPK2P78362 688 aaKnown RBP23.36■■□□□ 1.33
MUC1-220ENST00000498431 CABP2Q9NPB3 220 aa23.36■■□□□ 1.33
MUC1-220ENST00000498431 COL5A2P05997 1499 aaPredicted RBP23.36■■□□□ 1.33
MUC1-220ENST00000498431 PARP4Q9UKK3 1724 aaKnown RBP23.35■■□□□ 1.33
MUC1-220ENST00000498431 NLRP13Q86W25 1043 aa23.34■■□□□ 1.33
MUC1-220ENST00000498431 CENPJQ9HC77 1338 aaPredicted RBP23.33■■□□□ 1.33
MUC1-220ENST00000498431 QRICH2Q9H0J4 1663 aa23.33■■□□□ 1.33
MUC1-220ENST00000498431 THRAP3Q9Y2W1 955 aaKnown RBP23.32■■□□□ 1.32
MUC1-220ENST00000498431 ZBTB7CA1YPR0 619 aa23.3■■□□□ 1.32
MUC1-220ENST00000498431 CRB1P82279 1406 aa23.3■■□□□ 1.32
MUC1-220ENST00000498431 PEAK1Q9H792 1746 aa23.3■■□□□ 1.32
MUC1-220ENST00000498431 USP6P35125 1406 aa23.29■■□□□ 1.32
MUC1-220ENST00000498431 CABP1Q9NZU7 370 aa23.29■■□□□ 1.32
MUC1-220ENST00000498431 SLIT3O75094 1523 aa23.28■■□□□ 1.32
MUC1-220ENST00000498431 LRRC37A3O60309 1634 aa23.28■■□□□ 1.32
MUC1-220ENST00000498431 NLRP6P59044 892 aa23.27■■□□□ 1.32
MUC1-220ENST00000498431 PIK3C2AO00443 1686 aa23.27■■□□□ 1.32
MUC1-220ENST00000498431 BRD4O60885 1362 aaPredicted RBP23.27■■□□□ 1.31
MUC1-220ENST00000498431 NBPF14Q5TI25 921 aa23.26■■□□□ 1.31
MUC1-220ENST00000498431 COL18A1P39060 1754 aa23.26■■□□□ 1.31
MUC1-220ENST00000498431 SBF2Q86WG5 1849 aa23.26■■□□□ 1.31
MUC1-220ENST00000498431 AATKQ6ZMQ8 1374 aa23.26■■□□□ 1.31
MUC1-220ENST00000498431 OVOS2A0A0G2JMS6 1433 aa23.25■■□□□ 1.31
MUC1-220ENST00000498431 OVOS2A0A0J9YW53 1432 aa23.25■■□□□ 1.31
MUC1-220ENST00000498431 OVOS2Q6IE36 1432 aa23.25■■□□□ 1.31
MUC1-220ENST00000498431 PTF1AQ7RTS3 328 aa23.23■■□□□ 1.31
MUC1-220ENST00000498431 WNK3Q9BYP7 1800 aa23.22■■□□□ 1.31
MUC1-220ENST00000498431 AXIN2Q9Y2T1 843 aa23.22■■□□□ 1.31
MUC1-220ENST00000498431 RGPD3A6NKT7 1758 aaPredicted RBP23.21■■□□□ 1.31
MUC1-220ENST00000498431 RGPD4Q7Z3J3 1758 aa23.21■■□□□ 1.31
MUC1-220ENST00000498431 DDB1Q16531 1140 aa23.2■■□□□ 1.3
MUC1-220ENST00000498431 TOM1L2Q6ZVM7 507 aa23.2■■□□□ 1.3
MUC1-220ENST00000498431 RGPD5Q99666 1765 aa23.19■■□□□ 1.3
MUC1-220ENST00000498431 L3MBTL2Q969R5 705 aa23.19■■□□□ 1.3
MUC1-220ENST00000498431 ANO8Q9HCE9 1232 aaPredicted RBP23.19■■□□□ 1.3
MUC1-220ENST00000498431 CPSF1Q10570 1443 aaKnown RBP23.18■■□□□ 1.3
MUC1-220ENST00000498431 C11orf95C9JLR9 678 aaPredicted RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms