RNA–Protein interactions for RNA: ENST00000498347.1

FAM3D-205, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 2

Gene FAM3D, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-205ENST00000498347 RRBP1Q9P2E9 1410 aaKnown RBP13.7□□□□□ -0.22
FAM3D-205ENST00000498347 THSD7AQ9UPZ6 1657 aa13.69□□□□□ -0.22
FAM3D-205ENST00000498347 LOC105371045A0A1W2PR82 267 aa13.69□□□□□ -0.22
FAM3D-205ENST00000498347 PDGFDQ9GZP0 370 aaPredicted RBP13.69□□□□□ -0.22
FAM3D-205ENST00000498347 USP35Q9P2H5 1018 aa13.69□□□□□ -0.22
FAM3D-205ENST00000498347 PLEKHH1Q9ULM0 1364 aa13.69□□□□□ -0.22
FAM3D-205ENST00000498347 NRAPQ86VF7 1730 aa13.68□□□□□ -0.22
FAM3D-205ENST00000498347 TECPR2O15040 1411 aa13.68□□□□□ -0.22
FAM3D-205ENST00000498347 RREB1Q92766 1687 aa13.68□□□□□ -0.22
FAM3D-205ENST00000498347 COL14A1Q05707 1796 aaKnown RBP13.68□□□□□ -0.22
FAM3D-205ENST00000498347 NUP188Q5SRE5 1749 aa13.67□□□□□ -0.22
FAM3D-205ENST00000498347 GPR162Q16538 588 aa13.67□□□□□ -0.22
FAM3D-205ENST00000498347 BCL11BQ9C0K0 894 aaPredicted RBP13.67□□□□□ -0.22
FAM3D-205ENST00000498347 NRXN1Q9ULB1 1477 aa13.67□□□□□ -0.22
FAM3D-205ENST00000498347 GPRASP1Q5JY77 1395 aa13.66□□□□□ -0.22
FAM3D-205ENST00000498347 KIF1BO60333 1816 aa13.66□□□□□ -0.22
FAM3D-205ENST00000498347 ADGRF5Q8IZF2 1346 aa13.65□□□□□ -0.22
FAM3D-205ENST00000498347 CLTCL1P53675 1640 aa13.65□□□□□ -0.22
FAM3D-205ENST00000498347 CHRNA2Q15822 529 aa13.65□□□□□ -0.22
FAM3D-205ENST00000498347 TCP11L2Q8N4U5 519 aa13.65□□□□□ -0.22
FAM3D-205ENST00000498347 ANO8Q9HCE9 1232 aaPredicted RBP13.65□□□□□ -0.22
FAM3D-205ENST00000498347 FMN2Q9NZ56 1722 aa13.64□□□□□ -0.23
FAM3D-205ENST00000498347 MTFR1LQ9H019 292 aa13.64□□□□□ -0.23
FAM3D-205ENST00000498347 CEP350Q5VT06 3117 aa13.63□□□□□ -0.23
FAM3D-205ENST00000498347 PAK3O75914 559 aaPredicted RBP13.63□□□□□ -0.23
FAM3D-205ENST00000498347 ITGAEP38570 1179 aa13.63□□□□□ -0.23
FAM3D-205ENST00000498347 PROM2Q8N271 834 aa13.63□□□□□ -0.23
FAM3D-205ENST00000498347 ARXQ96QS3 562 aa13.63□□□□□ -0.23
FAM3D-205ENST00000498347 STK32BQ9NY57 414 aa13.63□□□□□ -0.23
FAM3D-205ENST00000498347 THRAP3Q9Y2W1 955 aaKnown RBP13.63□□□□□ -0.23
FAM3D-205ENST00000498347 UTRNP46939 3433 aa13.62□□□□□ -0.23
FAM3D-205ENST00000498347 SGIP1Q9BQI5 828 aa13.62□□□□□ -0.23
FAM3D-205ENST00000498347 NRKQ7Z2Y5 1582 aa13.62□□□□□ -0.23
FAM3D-205ENST00000498347 ABCA3Q99758 1704 aa13.61□□□□□ -0.23
FAM3D-205ENST00000498347 ZC3H6P61129 1189 aaKnown RBP13.61□□□□□ -0.23
FAM3D-205ENST00000498347 SLC15A2Q16348 729 aa13.61□□□□□ -0.23
FAM3D-205ENST00000498347 RGPD8O14715 1765 aaPredicted RBP13.6□□□□□ -0.23
FAM3D-205ENST00000498347 KIAA0232Q92628 1395 aa13.6□□□□□ -0.23
FAM3D-205ENST00000498347 HSPA6P17066 643 aa13.6□□□□□ -0.23
FAM3D-205ENST00000498347 LARP1Q6PKG0 1096 aaKnown RBP13.6□□□□□ -0.23
FAM3D-205ENST00000498347 ACIN1Q9UKV3 1341 aaKnown RBP13.6□□□□□ -0.23
FAM3D-205ENST00000498347 RGL3Q3MIN7 710 aa13.59□□□□□ -0.23
FAM3D-205ENST00000498347 NGDNQ8NEJ9 315 aaKnown RBP13.59□□□□□ -0.23
FAM3D-205ENST00000498347 YTHDC2Q9H6S0 1430 aaKnown RBP13.58□□□□□ -0.24
FAM3D-205ENST00000498347 SAFB2Q14151 953 aaKnown RBP eCLIP13.58□□□□□ -0.24
FAM3D-205ENST00000498347 PRAM1Q96QH2 718 aa13.57□□□□□ -0.24
FAM3D-205ENST00000498347 POGKQ9P215 609 aa13.57□□□□□ -0.24
FAM3D-205ENST00000498347 MAP3K5Q99683 1374 aa13.57□□□□□ -0.24
FAM3D-205ENST00000498347 ANKRD30BQ9BXX2 1392 aa13.57□□□□□ -0.24
FAM3D-205ENST00000498347 ANKARQ7Z5J8 1434 aa13.56□□□□□ -0.24
FAM3D-205ENST00000498347 CASZ1Q86V15 1759 aa13.56□□□□□ -0.24
FAM3D-205ENST00000498347 TXNRD1Q16881 649 aa13.56□□□□□ -0.24
FAM3D-205ENST00000498347 C14orf93Q9H972 538 aaKnown RBP13.56□□□□□ -0.24
FAM3D-205ENST00000498347 MYOM1P52179 1685 aa13.56□□□□□ -0.24
FAM3D-205ENST00000498347 DHX57Q6P158 1386 aaKnown RBP13.56□□□□□ -0.24
FAM3D-205ENST00000498347 SSH2Q76I76 1423 aa13.56□□□□□ -0.24
FAM3D-205ENST00000498347 DLC1Q96QB1 1528 aa13.55□□□□□ -0.24
FAM3D-205ENST00000498347 PTF1AQ7RTS3 328 aa13.55□□□□□ -0.24
FAM3D-205ENST00000498347 PELP1Q8IZL8 1130 aaKnown RBP13.55□□□□□ -0.24
FAM3D-205ENST00000498347 PPLO60437 1756 aa13.55□□□□□ -0.24
FAM3D-205ENST00000498347 GRIN3BO60391 1043 aa13.54□□□□□ -0.24
FAM3D-205ENST00000498347 DDB1Q16531 1140 aa13.53□□□□□ -0.24
FAM3D-205ENST00000498347 OVOS2A0A0G2JMS6 1433 aa13.53□□□□□ -0.24
FAM3D-205ENST00000498347 OVOS2A0A0J9YW53 1432 aa13.53□□□□□ -0.24
FAM3D-205ENST00000498347 OVOS2Q6IE36 1432 aa13.53□□□□□ -0.24
FAM3D-205ENST00000498347 SLC4A1APQ9BWU0 796 aaKnown RBP13.52□□□□□ -0.25
FAM3D-205ENST00000498347 ALS2Q96Q42 1657 aa13.52□□□□□ -0.25
FAM3D-205ENST00000498347 TRPM3Q9HCF6 1732 aaPredicted RBP13.51□□□□□ -0.25
FAM3D-205ENST00000498347 NUTM2GQ5VZR2 741 aa13.51□□□□□ -0.25
FAM3D-205ENST00000498347 GPBP1L1Q9HC44 474 aaPredicted RBP13.51□□□□□ -0.25
FAM3D-205ENST00000498347 CFAP70Q5T0N1 1121 aa13.5□□□□□ -0.25
FAM3D-205ENST00000498347 KNDC1Q76NI1 1749 aa13.5□□□□□ -0.25
FAM3D-205ENST00000498347 IFT172Q9UG01 1749 aa13.5□□□□□ -0.25
FAM3D-205ENST00000498347 PRR36Q9H6K5 1346 aa13.49□□□□□ -0.25
FAM3D-205ENST00000498347 WASLO00401 505 aaPredicted RBP13.49□□□□□ -0.25
FAM3D-205ENST00000498347 MARCH10Q8NA82 808 aaPredicted RBP13.49□□□□□ -0.25
FAM3D-205ENST00000498347 HIRIP3Q9BW71 556 aaPredicted RBP13.49□□□□□ -0.25
FAM3D-205ENST00000498347 RGPD3A6NKT7 1758 aaPredicted RBP13.48□□□□□ -0.25
FAM3D-205ENST00000498347 RGPD4Q7Z3J3 1758 aa13.48□□□□□ -0.25
FAM3D-205ENST00000498347 EIF3AQ14152 1382 aaKnown RBP13.48□□□□□ -0.25
FAM3D-205ENST00000498347 KLHL34Q8N239 644 aa13.48□□□□□ -0.25
FAM3D-205ENST00000498347 SLC16A10Q8TF71 515 aa13.48□□□□□ -0.25
FAM3D-205ENST00000498347 POLD1P28340 1107 aa13.47□□□□□ -0.25
FAM3D-205ENST00000498347 PIK3C2GO75747 1445 aa13.47□□□□□ -0.25
FAM3D-205ENST00000498347 CDCA7Q9BWT1 371 aaPredicted RBP13.46□□□□□ -0.25
FAM3D-205ENST00000498347 CPDO75976 1380 aa13.45□□□□□ -0.26
FAM3D-205ENST00000498347 MINK1Q8N4C8 1332 aaPredicted RBP13.45□□□□□ -0.26
FAM3D-205ENST00000498347 SHANK3Q9BYB0 1731 aa13.45□□□□□ -0.26
FAM3D-205ENST00000498347 APLP1P51693 650 aa13.45□□□□□ -0.26
FAM3D-205ENST00000498347 DNAJC5GQ8N7S2 189 aa13.45□□□□□ -0.26
FAM3D-205ENST00000498347 ABTB2Q8N961 1025 aa13.45□□□□□ -0.26
FAM3D-205ENST00000498347 BCL9O00512 1426 aa13.45□□□□□ -0.26
FAM3D-205ENST00000498347 CAPN15O75808 1086 aa13.44□□□□□ -0.26
FAM3D-205ENST00000498347 GCP02774 474 aa13.44□□□□□ -0.26
FAM3D-205ENST00000498347 NUDT16Q96DE0 195 aaKnown RBP13.44□□□□□ -0.26
FAM3D-205ENST00000498347 ATP10DQ9P241 1426 aa13.44□□□□□ -0.26
FAM3D-205ENST00000498347 SBF2Q86WG5 1849 aa13.43□□□□□ -0.26
FAM3D-205ENST00000498347 ATP7BP35670 1465 aa13.43□□□□□ -0.26
FAM3D-205ENST00000498347 EXOC5O00471 708 aa13.43□□□□□ -0.26
FAM3D-205ENST00000498347 YBX3P16989 372 aaKnown RBP eCLIP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms