RNA–Protein interactions for RNA: ENST00000497873.1

PAXBP1-209, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 2

Gene PAXBP1, Length 2,277 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-209ENST00000497873 F12P00748 615 aaPredicted RBP10.3□□□□□ -0.76
PAXBP1-209ENST00000497873 SKIP12755 728 aa10.3□□□□□ -0.76
PAXBP1-209ENST00000497873 FAM205CA6NFA0 338 aa10.29□□□□□ -0.76
PAXBP1-209ENST00000497873 CTHP32929 405 aa10.28□□□□□ -0.76
PAXBP1-209ENST00000497873 DEPDC4Q8N2C3 294 aa10.28□□□□□ -0.76
PAXBP1-209ENST00000497873 USP17L3A6NCW0 530 aa10.28□□□□□ -0.76
PAXBP1-209ENST00000497873 USP17L4A6NCW7 530 aa10.28□□□□□ -0.76
PAXBP1-209ENST00000497873 USP17L2Q6R6M4 530 aa10.28□□□□□ -0.76
PAXBP1-209ENST00000497873 USP17L1Q7RTZ2 530 aa10.28□□□□□ -0.76
PAXBP1-209ENST00000497873 STK32AQ8WU08 396 aa10.28□□□□□ -0.76
PAXBP1-209ENST00000497873 ZMIZ1Q9ULJ6 1067 aa10.28□□□□□ -0.76
PAXBP1-209ENST00000497873 SALL2Q9Y467 1007 aaPredicted RBP10.28□□□□□ -0.76
PAXBP1-209ENST00000497873 TK2O00142 265 aa10.27□□□□□ -0.76
PAXBP1-209ENST00000497873 ST18O60284 1047 aa10.27□□□□□ -0.76
PAXBP1-209ENST00000497873 FMNL1O95466 1100 aaPredicted RBP10.27□□□□□ -0.76
PAXBP1-209ENST00000497873 PPP4CP60510 307 aa10.27□□□□□ -0.76
PAXBP1-209ENST00000497873 CCDC27Q2M243 656 aa10.27□□□□□ -0.76
PAXBP1-209ENST00000497873 APLP1P51693 650 aa10.27□□□□□ -0.77
PAXBP1-209ENST00000497873 TMEM164Q5U3C3 297 aa10.27□□□□□ -0.77
PAXBP1-209ENST00000497873 FAM174AQ8TBP5 190 aa10.27□□□□□ -0.77
PAXBP1-209ENST00000497873 USP17L5A8MUK1 530 aa10.26□□□□□ -0.77
PAXBP1-209ENST00000497873 JUNDP17535 347 aa10.26□□□□□ -0.77
PAXBP1-209ENST00000497873 PTPRNQ16849 979 aa10.26□□□□□ -0.77
PAXBP1-209ENST00000497873 SND1Q7KZF4 910 aaKnown RBP eCLIP10.26□□□□□ -0.77
PAXBP1-209ENST00000497873 NFATC2IPQ8NCF5 419 aa10.26□□□□□ -0.77
PAXBP1-209ENST00000497873 THAP11Q96EK4 314 aa10.26□□□□□ -0.77
PAXBP1-209ENST00000497873 NOVA2Q9UNW9 492 aaKnown RBP10.26□□□□□ -0.77
PAXBP1-209ENST00000497873 ELOAQ14241 798 aaKnown RBP10.26□□□□□ -0.77
PAXBP1-209ENST00000497873 HPS5Q9UPZ3 1129 aa10.25□□□□□ -0.77
PAXBP1-209ENST00000497873 PCDHB3Q9Y5E6 796 aa10.25□□□□□ -0.77
PAXBP1-209ENST00000497873 ADGRD1Q6QNK2 874 aa10.24□□□□□ -0.77
PAXBP1-209ENST00000497873 ZC3H4Q9UPT8 1303 aaKnown RBP10.24□□□□□ -0.77
PAXBP1-209ENST00000497873 NR1I2O75469 434 aa10.23□□□□□ -0.77
PAXBP1-209ENST00000497873 BCAMP50895 628 aa10.23□□□□□ -0.77
PAXBP1-209ENST00000497873 ANKK1Q8NFD2 765 aa10.23□□□□□ -0.77
PAXBP1-209ENST00000497873 MKRN1Q9UHC7 482 aaKnown RBP10.23□□□□□ -0.77
PAXBP1-209ENST00000497873 GOLGA8CPA6NN73 597 aa10.22□□□□□ -0.77
PAXBP1-209ENST00000497873 PLEKHM2Q8IWE5 1019 aa10.22□□□□□ -0.77
PAXBP1-209ENST00000497873 CEP126Q9P2H0 1117 aa10.22□□□□□ -0.77
PAXBP1-209ENST00000497873 SLFNL1Q499Z3 407 aa10.22□□□□□ -0.77
PAXBP1-209ENST00000497873 CRTC2Q53ET0 693 aaPredicted RBP10.22□□□□□ -0.77
PAXBP1-209ENST00000497873 B4GALNT3Q6L9W6 998 aa10.22□□□□□ -0.77
PAXBP1-209ENST00000497873 SOWAHBA6NEL2 793 aa10.21□□□□□ -0.77
PAXBP1-209ENST00000497873 GNEQ9Y223 722 aaKnown RBP10.21□□□□□ -0.77
PAXBP1-209ENST00000497873 NCOA4Q13772 614 aa10.21□□□□□ -0.78
PAXBP1-209ENST00000497873 PCDHB9Q9Y5E1 797 aa10.21□□□□□ -0.78
PAXBP1-209ENST00000497873 POTEB3A0JP26 581 aa10.2□□□□□ -0.78
PAXBP1-209ENST00000497873 USP17L15C9J2P7 530 aa10.2□□□□□ -0.78
PAXBP1-209ENST00000497873 USP17L10C9JJH3 530 aa10.2□□□□□ -0.78
PAXBP1-209ENST00000497873 USP17L13C9JLJ4 530 aa10.2□□□□□ -0.78
PAXBP1-209ENST00000497873 USP17L12C9JPN9 530 aa10.2□□□□□ -0.78
PAXBP1-209ENST00000497873 USP17L11C9JVI0 530 aa10.2□□□□□ -0.78
PAXBP1-209ENST00000497873 USP17L21D6R901 530 aa10.2□□□□□ -0.78
PAXBP1-209ENST00000497873 USP17L18D6R9N7 530 aa10.2□□□□□ -0.78
PAXBP1-209ENST00000497873 USP17L22D6RA61 530 aa10.2□□□□□ -0.78
PAXBP1-209ENST00000497873 USP17L17D6RBQ6 530 aa10.2□□□□□ -0.78
PAXBP1-209ENST00000497873 USP17L19D6RCP7 530 aa10.2□□□□□ -0.78
PAXBP1-209ENST00000497873 USP17L20D6RJB6 530 aa10.2□□□□□ -0.78
PAXBP1-209ENST00000497873 HRO43593 1189 aa10.2□□□□□ -0.78
PAXBP1-209ENST00000497873 CCNYL3P0C7X3 344 aa10.2□□□□□ -0.78
PAXBP1-209ENST00000497873 LSM11P83369 360 aaKnown RBP eCLIP10.2□□□□□ -0.78
PAXBP1-209ENST00000497873 PTK2Q05397 1052 aa10.2□□□□□ -0.78
PAXBP1-209ENST00000497873 USP17L24Q0WX57 530 aa10.2□□□□□ -0.78
PAXBP1-209ENST00000497873 POTEBQ6S5H4 581 aa10.2□□□□□ -0.78
PAXBP1-209ENST00000497873 OCSTAMPQ9BR26 566 aa10.2□□□□□ -0.78
PAXBP1-209ENST00000497873 FAM196BA6NMK8 535 aa10.19□□□□□ -0.78
PAXBP1-209ENST00000497873 PHLDB3Q6NSJ2 640 aa10.19□□□□□ -0.78
PAXBP1-209ENST00000497873 STAC3Q96MF2 364 aa10.19□□□□□ -0.78
PAXBP1-209ENST00000497873 EVA1BQ9NVM1 165 aa10.19□□□□□ -0.78
PAXBP1-209ENST00000497873 TSR3Q9UJK0 312 aaKnown RBP10.19□□□□□ -0.78
PAXBP1-209ENST00000497873 CCDC180Q9P1Z9 1646 aa10.19□□□□□ -0.78
PAXBP1-209ENST00000497873 RASA1P20936 1047 aa10.19□□□□□ -0.78
PAXBP1-209ENST00000497873 PDXDC2PQ6P474 469 aa10.19□□□□□ -0.78
PAXBP1-209ENST00000497873 RNF135Q8IUD6 432 aa10.19□□□□□ -0.78
PAXBP1-209ENST00000497873 HS3ST6Q96QI5 342 aa10.19□□□□□ -0.78
PAXBP1-209ENST00000497873 LARP1Q6PKG0 1096 aaKnown RBP10.18□□□□□ -0.78
PAXBP1-209ENST00000497873 FAM160A2Q8N612 972 aaPredicted RBP10.18□□□□□ -0.78
PAXBP1-209ENST00000497873 NUDT12Q9BQG2 462 aa10.18□□□□□ -0.78
PAXBP1-209ENST00000497873 KCNH2Q12809 1159 aa10.18□□□□□ -0.78
PAXBP1-209ENST00000497873 CCER1Q8TC90 406 aaPredicted RBP10.18□□□□□ -0.78
PAXBP1-209ENST00000497873 GPSM3Q9Y4H4 160 aa10.18□□□□□ -0.78
PAXBP1-209ENST00000497873 PTK7Q13308 1070 aa10.17□□□□□ -0.78
PAXBP1-209ENST00000497873 PLPP7Q8NBV4 271 aa10.17□□□□□ -0.78
PAXBP1-209ENST00000497873 ARMC2Q8NEN0 867 aa10.17□□□□□ -0.78
PAXBP1-209ENST00000497873 PHTF2Q8N3S3 785 aa10.17□□□□□ -0.78
PAXBP1-209ENST00000497873 SPSB2Q99619 263 aa10.17□□□□□ -0.78
PAXBP1-209ENST00000497873 PRDM9Q9NQV7 894 aa10.17□□□□□ -0.78
PAXBP1-209ENST00000497873 SLAIN2Q9P270 581 aa10.17□□□□□ -0.78
PAXBP1-209ENST00000497873 DXOO77932 396 aaKnown RBP10.16□□□□□ -0.78
PAXBP1-209ENST00000497873 MSS51Q4VC12 460 aa10.16□□□□□ -0.78
PAXBP1-209ENST00000497873 TXNDC2Q86VQ3 553 aa10.16□□□□□ -0.78
PAXBP1-209ENST00000497873 FAM200AQ8TCP9 573 aa10.16□□□□□ -0.78
PAXBP1-209ENST00000497873 WNT2BQ93097 391 aa10.16□□□□□ -0.78
PAXBP1-209ENST00000497873 E9PSI1 815 aa10.15□□□□□ -0.78
PAXBP1-209ENST00000497873 ATP5J2-PTCD1G3V325 749 aa10.15□□□□□ -0.78
PAXBP1-209ENST00000497873 ADAM32Q8TC27 787 aa10.15□□□□□ -0.78
PAXBP1-209ENST00000497873 SSFA2P28290 1259 aa10.14□□□□□ -0.79
PAXBP1-209ENST00000497873 COPS2P61201 443 aa10.14□□□□□ -0.79
PAXBP1-209ENST00000497873 TSGA10IPQ3SY00 556 aa10.14□□□□□ -0.79
PAXBP1-209ENST00000497873 NBPF14Q5TI25 921 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms